Gene

KWMTBOMO14877  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012168

Annotation

eIF2B-beta_protein_[Bombyx_mori]

Location

Bomo_Chr24(+):16859326-16869106      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 0.947

CDS

ATGGCACCTCTAGAATCTTTAGATATTGAATTAAGCGAGAAACACATCGAAACAGTCGGCAAATTCGTAGCGGACATAAGAAACAATAAATTATCTGGCTCAGAGCAGATAGCGGAGGCGACGCTAACACTAGTGGAGAAGATTATCAGCGAGTCTAATGCAACAGCACGGGAACTTTGTGGAGTCCTCCGTGCGGCCGCTCGTCGTATCAGCTCAAGTTTACCACTGGAGCTGGTAGCGATCAACATGATTAGGAGAGTTTTAAGAGCCATCAGGGATGAAAACAGAGCTTCCGTAGACCAGTTCCAGAGTGGTGAGGGTGTAGGAGAGAGTCTCCAAGGTCTGGTTCTGGCGACTCCGGCCCGGCACAGCATCGTGCCTTCAACGGATCAGGACTTGAGGGAACCTATAAGAGATCACATCGCAGAGCTCCGAACCGAGCTGGAGACAATGAGGTCGTCCATAACGAGTCAGGCCCGCGAGCACGTGCGGGCGGACGAGGTGCTACTCACGTTCGGGGCCAGCGCTCTGGTCGAGCGGTTCCTGAGGCCGACCCAGAATAGGAACTGCAAGGTCGTCGTCGCGGAAGGGACTGACGTCGGCGAGAGTCACGCCATGGCGCGGAGGCTGAGTAATTCTGGTGTTTCGGTCACGGTCATCAATAGTTCGTGTGTGTTCGCGGTGATGTCCAGGGTCAACAAGGTGGTGGTCGAGGTGCAGGCTGCGATGGGGGGCGGCGCGGTCCTTGGGGACGCGGGCCTCCATTCCGTCACCCTCGCCGCTAAATACTACAAAATACCGGTAGTGGCATTGGCGCCTCTGTACCGGATGCTGCCCCATCATCTCTACGACCCCCAGAGCTTCGGTTCCCTGTCGTCGCCGCTACAGACCATGGAGTACGCCGATTGCGGCTCAGACTCCCTGCAGGTCCTCGCTCCGAAGTTCGACTTCGTTCCGCCAGACCACATCACGCTATTCATAACTAATCAGGGAGGAAGCTGCCCGTCCTACATCTACAGATTACTGTCAGAGATATACGATCCTAAAGATTATCAAATTTGA

Protein

MAPLESLDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISESNATARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIRDENRASVDQFQSGEGVGESLQGLVLATPARHSIVPSTDQDLREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQNRNCKVVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQVLAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDYQI

Similarity

Belongs to the eIF-2B alpha/beta/delta subunits family.

Uniprot

Q0ZB80   H9JRK8   A0A2A4JTD2   S4NTZ6   I4DS38   A0A0N1IN29   + More
A0A0N1IQ49   A0A067QZS8   A0A1B6DE15   D7EIS2   A0A1Q3FC32   A0A1S4FBQ7   Q1HQF9   A0A1W4X8Q4   A0A1W4XJE5   A0A1Y1MZW5   A0A0A1X3L4   W8ASW8   A0A0L0C0V5   A0A182HAB8   A0A1B6KPN8   A0A2P6K3J3   A0A034V5F7   A0A2A3E6J3   J9K5T6   A0A0K8VU03   A0A0K8TSW4   B0X889   A0A2H8TWW1   E1ZV62   A0A088ATR1   A0A2S2Q9F9   A0A0M4EY12   A0A2Y9D1S7   A0A182QZK0   V4A4Q2   A0A336MBE3   A0A1A9WAQ1   A0A0J7L5G9   A0A1S3HHL1   B4MSZ2   A0A336M9D3   E2BDA0   A0A195DY54   A0A224XSH9   A0A0V0GCA2   A0A069DS82   A0A2B4SQL5   Q7QIV9   A0A182V8G4   A0A1W0XD20   A0A2R7WPE0   C4WUN2   A0A182KQA4   A0A310SP86   A0A026X271   A0A154PUC3   A0A1A9VD54   A0A067CTR4   A0A195B6Z5   A0A182S6T6   A0A1A9Z211   A0A232EXX0   T1HJZ0   A0A210PWE7   F7B4U7   T0QNH9   A0A1W2WIA5   A0A2C9GRR0   K7J9A1   F6XWN6   A0A182TRS9   B4JL27   A0A158NGQ0   F4WZY1   B3MWH1   A0A182MT41   Q29HR5   B4GYF8   A0A3B0K0P5   A0A1W4VF70   A0A2S2NSD9   A0A195FFD5   E9ILC0   A0A1B6E5Y4   B4MG78   A0A0L0G6J3   B4Q0X2   O76863   A0A0M8ZX09   A0A1I8NY96   B4R3J7   B4I9Y7   A0A182JEJ3   A0A1V9YTY4   A0A2D4MKY3   A0A151XAE6   B4L1M5   A0A182J8L8   A0A212FFH0  

Pubmed

19121390    23622113    22651552    26354079    24845553    18362917    + More
19820115    17204158    17510324    28004739    25830018    24495485    26108605    26483478    25348373    26369729    20798317    23254933    17994087    26334808    12364791    14747013    17210077    20966253    24508170    30249741    23785293    28648823    28812685    12481130    15114417    20075255    21347285    21719571    15632085    21282665    17550304    10731132    11060303    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25527045    22118469   

EMBL

DQ645456    ABG54284.1    BABH01031759    BABH01031760    BABH01031761    NWSH01000647    + More
PCG75036.1    GAIX01012021    JAA80539.1    AK405405    BAM20728.1    KQ458863    KPJ04737.1    KQ459988    KPJ18811.1    KK853149    KDR10651.1    GEDC01013463    JAS23835.1    DS497685    EFA12261.1    GFDL01009997    JAV25048.1    DQ440485    CH477361    ABF18518.1    EAT42653.1    GEZM01016669    JAV91203.1    GBXI01008816    JAD05476.1    GAMC01018787    JAB87768.1    JRES01001065    KNC25871.1    JXUM01122538    JXUM01122539    JXUM01122540    JXUM01122541    KQ566615    KXJ69967.1    GEBQ01026596    JAT13381.1    MWRG01032646    PRD20893.1    GAKP01021233    GAKP01021231    JAC37719.1    KZ288357    PBC27114.1    ABLF02031945    GDHF01032172    GDHF01009981    JAI20142.1    JAI42333.1    GDAI01000578    JAI17025.1    DS232478    EDS42358.1    GFXV01006980    MBW18785.1    GL434441    EFN74921.1    GGMS01005068    MBY74271.1    CP012528    ALC48780.1    AXCN02000424    KB202719    ESO88246.1    UFQS01000843    UFQT01000843    SSX07223.1    SSX27566.1    LBMM01000692    KMQ97739.1    CH963851    EDW75231.1    UFQT01000749    SSX26942.1    GL447585    EFN86328.1    KQ980107    KYN17637.1    GFTR01005343    JAW11083.1    GECL01001127    JAP04997.1    GBGD01001986    JAC86903.1    LSMT01000026    PFX32201.1    AAAB01008807    EAA03953.3    MTYJ01000003    OQV25373.1    KK855209    PTY21444.1    AK341141    BAH71602.1    KQ760559    OAD59803.1    KK107020    QOIP01000004    EZA62415.1    RLU23877.1    KQ435180    KZC14958.1    KK583192    KDO33903.1    KQ976574    KYM80288.1    NNAY01001707    OXU23167.1    ACPB03016329    NEDP02005443    OWF40818.1    EAAA01001333    JH767138    EQC39644.1    APCN01000155    CH916370    EDW00280.1    ADTU01015169    GL888480    EGI60271.1    CH902625    EDV34956.1    AXCM01003600    CH379064    EAL31693.1    CH479197    EDW27814.1    OUUW01000011    SPP86903.1    GGMR01007470    MBY20089.1    KQ981625    KYN39071.1    GL764074    EFZ18626.1    GEDC01003965    JAS33333.1    CH940672    EDW57401.1    KQ241805    KNC83853.1    CM000162    EDX01339.1    AE014298    AF289101    BT023929    AL023874    AJ344147    AAF45809.1    AAG38015.1    ABB36433.1    CAA19648.1    CAC82992.1    KQ435812    KOX72835.1    CM000366    EDX16949.1    CH480825    EDW44018.1    JNBS01002806    OQR89235.1    IACM01093049    LAB33436.1    KQ982339    KYQ57333.1    CH933810    EDW07661.1    AGBW02008825    OWR52479.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000027135    UP000007266    + More
UP000008820    UP000192223    UP000037069    UP000069940    UP000249989    UP000242457    UP000007819    UP000002320    UP000000311    UP000005203    UP000092553    UP000075884    UP000075886    UP000030746    UP000091820    UP000036403    UP000085678    UP000007798    UP000008237    UP000078492    UP000225706    UP000007062    UP000075903    UP000075882    UP000053097    UP000279307    UP000076502    UP000078200    UP000030745    UP000078540    UP000075901    UP000092445    UP000215335    UP000015103    UP000242188    UP000008144    UP000030762    UP000075840    UP000002358    UP000075902    UP000001070    UP000005205    UP000007755    UP000007801    UP000075883    UP000001819    UP000008744    UP000268350    UP000192221    UP000078541    UP000008792    UP000054560    UP000002282    UP000000803    UP000053105    UP000095300    UP000000304    UP000001292    UP000075880    UP000243217    UP000075809    UP000009192    UP000007151   

PRIDE

Q0ZB80    H9JRK8   

Pfam

PF01008   IF-2B        + More
PF13639   zf-RING_2

Interpro

IPR037171   NagB/RpiA_transferase-like        + More
IPR000649   IF-2B-related       
IPR027363   M1Pi_N       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       

SUPFAM

SSF100950   SSF100950       

Gene 3D

1.20.120.420     3.30.40.10    

ProteinModelPortal

Q0ZB80   H9JRK8   A0A2A4JTD2   S4NTZ6   I4DS38   A0A0N1IN29   + More
A0A0N1IQ49   A0A067QZS8   A0A1B6DE15   D7EIS2   A0A1Q3FC32   A0A1S4FBQ7   Q1HQF9   A0A1W4X8Q4   A0A1W4XJE5   A0A1Y1MZW5   A0A0A1X3L4   W8ASW8   A0A0L0C0V5   A0A182HAB8   A0A1B6KPN8   A0A2P6K3J3   A0A034V5F7   A0A2A3E6J3   J9K5T6   A0A0K8VU03   A0A0K8TSW4   B0X889   A0A2H8TWW1   E1ZV62   A0A088ATR1   A0A2S2Q9F9   A0A0M4EY12   A0A2Y9D1S7   A0A182QZK0   V4A4Q2   A0A336MBE3   A0A1A9WAQ1   A0A0J7L5G9   A0A1S3HHL1   B4MSZ2   A0A336M9D3   E2BDA0   A0A195DY54   A0A224XSH9   A0A0V0GCA2   A0A069DS82   A0A2B4SQL5   Q7QIV9   A0A182V8G4   A0A1W0XD20   A0A2R7WPE0   C4WUN2   A0A182KQA4   A0A310SP86   A0A026X271   A0A154PUC3   A0A1A9VD54   A0A067CTR4   A0A195B6Z5   A0A182S6T6   A0A1A9Z211   A0A232EXX0   T1HJZ0   A0A210PWE7   F7B4U7   T0QNH9   A0A1W2WIA5   A0A2C9GRR0   K7J9A1   F6XWN6   A0A182TRS9   B4JL27   A0A158NGQ0   F4WZY1   B3MWH1   A0A182MT41   Q29HR5   B4GYF8   A0A3B0K0P5   A0A1W4VF70   A0A2S2NSD9   A0A195FFD5   E9ILC0   A0A1B6E5Y4   B4MG78   A0A0L0G6J3   B4Q0X2   O76863   A0A0M8ZX09   A0A1I8NY96   B4R3J7   B4I9Y7   A0A182JEJ3   A0A1V9YTY4   A0A2D4MKY3   A0A151XAE6   B4L1M5   A0A182J8L8   A0A212FFH0  

PDB

6EZO     E-value=1.26008e-50,     Score=504

KEGG

733083    K03754 translation initiation factor eIF-2B subunit beta | (RefSeq) eIF2B-beta protein

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)

GO

GO:0044237   GO:0016021   GO:0003743   GO:0006446   GO:0006413   GO:0005851   GO:0071456   GO:0005829   GO:0005525   GO:0007264   GO:0006508   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

353

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09356

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00282

outside

1  -  353

 

 

Pi

231.388686

Theta

28.569278

Tajima's D

3.021904

CLR

0.135523

CSRT

0.981900904954752

Interpretation

Uncertain