Gene

KWMTBOMO14872

Pre Gene Modal

BGIBMGA012186

Annotation

PREDICTED:_leucine-rich_repeat_serine/threonine-protein_kinase_1_[Plutella_xylostella]

Location

Bomo_Chr24(-):16767990-16777805      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.717 Nuclear   Reliability : 1.24

CDS

ATGTTCAATCCAGTTCATGTGGCGGCCCTGTCGCGCTGGGACCGCGACCCGCTGTCTGCCGCCTGCCGCGCGTACTGCGGGCTGCGGCAGGAGCTGGGCATCGTGCTGCGCCTTTCGCACCCGCACGTGGTCTCCCTGCGCGCCGTCTGCGCCGCCCCGCTCGCCCTGCTGCTGGAGCTCGCGCCGCAGGGAGCTCTGGACGCAGCCCTACGGGAGTACCGGAGCGGGGGAGCGCGGGTGGGGGAGAGGGCGGCGCGTGCTGTCCTCCTGCAGGTAGCTCGGGCCCTCGAGTACTTGCACGCCAGGAGGATCGTGTACAGAGACCTGAAGTCTGAAAACGTATTGGTGTGGCATCTCCCGAAGCCGCACGAAGCCGCGGAAGCTGAGATCAACTCAGCCCCCCTACAAGTACTGGTCAAACTGGGAGATTACGGTATCAGCAGGCTAGCTCCGCCCTCAGGGACGAAAGGCTTCGGGGGCACTGAAGGGTTCATGGCGCCGGAGATCATGAGATACAATGGCGAAGAAGAATACAATGAAAAGGTGGACTGCTTCTCTTACGGCATGCTGATCTACGAGGTGGTGACCTGCCGCCAGCCGTTCGAAGGTCACGAGGCCGTCAAGGAAGCCGTGCTTGAGGGCGTGAGGCCCACACTCACTCCAAGGGAGTTGGAGTATCCGTGCTGCGTTCTCGAGATGATGCGTCGGTGTTGGAGCGGATCTCCGGAGGCGCGTCCGTCGGGGGCCGCGCTGGTGTCCCTTAGCGCAGCCCCCGAGTACGGCACGCTCCGGGACGCGGCCGCCTGCCGCCCCGCCGCCACCGCCGCGGCGCTGCCTCTACACACACGTAGAGGGGGAAGAGGTCGACCGAAGAAGACGTGGATGGAGTGTGTTAATGACGATATGAGAGTTGAGATGACGGCTGATAGAAGAGAACGGTATAGTAAAATAAAGTGGAGACAAAGAAAGAAGAAGAGATCTAGAGATTGA

Protein

MFNPVHVAALSRWDRDPLSAACRAYCGLRQELGIVLRLSHPHVVSLRAVCAAPLALLLELAPQGALDAALREYRSGGARVGERAARAVLLQVARALEYLHARRIVYRDLKSENVLVWHLPKPHEAAEAEINSAPLQVLVKLGDYGISRLAPPSGTKGFGGTEGFMAPEIMRYNGEEEYNEKVDCFSYGMLIYEVVTCRQPFEGHEAVKEAVLEGVRPTLTPRELEYPCCVLEMMRRCWSGSPEARPSGAALVSLSAAPEYGTLRDAAACRPAATAAALPLHTRRGGRGRPKKTWMECVNDDMRVEMTADRRERYSKIKWRQRKKKRSRD

Uniprot

A0A3S2LWW4   A0A0N0PAG7   A0A067RI47   A0A1Z5LCM4   A0A293MA75   B4QS06   + More
A0A182X593   A0A293M524   U4ULB5   A0A0C9R2L5   N6T6X8   A0A0N0PEE2   A0A1I8PLG1   A0A1I8PLM4   A0A1I8M198   A0A1I8M187   A0A0A1WUR4   E0VNV3   X1WSM3   A0A1B6J140   A0A1Y1MLJ9   B3M0A7   A0A3B0KMK8   A0A0P8ZZT0   A0A3B0KHA4   A0A0R3NFE6   A0A0R3NL21   Q29AY4   A0A0R3NFC0   A0A2S2Q8Y9   A0A084WPJ1   A0A182N1F9   A0A182QR29   A0A1W4VAB8   A0A1B0BB95   A0A1W4V9W5   A0A1A9YFA6   A0A0N8BCM2   A0A0N8AZU8   A0A2M4ABT7   A0A0P5HX33   A0A0P5IRB8   A0A1W4WSZ2   A0A1W4WRZ4   T1IVJ9   A0A0P4XVS5   B4PPQ9   A0A0R1E0Y7   A0A182I9P3   A0A0R1E1H4   A0A2M4CLK3   A0A0R1E2E3   A0A0P5WAQ0   A0A182IMZ8   A0A1B0CX03   A0A0P5B7Q8   A0A182YEY4   A0A0P5UWM1   B3P348   A0A0P5UZY3   W5JTR7   A0A0N8AVG1   A0A0P5RIG2   A0A0P6FL56   A0A0P5SPY2   A0A182FA03   A0A0P5WWD9   A0A0N8CKL0   A0A0P5M3Y1   A0A0P6G6X9   A0A182LYZ5   A0A0P4ZM56   A0A0N7ZMR0   A0A0P4YIT6   A0A0P5SQB3   A0A0N8C006   A0A0P5QKI8   A0A0P5KJL2   A0A0N8E9S2   A0A0B4KH16   A0A1A9Z8E1   A0A0N8BKQ8   Q9VDJ9   B4II95   A0A0P6HGI5   A0A0B4KHT3   A0A164KNT3   A0A0N7ZM35   A0A0P5DYY4   A0A0P6E2G8   A0A0P6BX16   A0A0P5ZYU7   A0A0P5D7P1   A0A0P6EXZ9   A0A0P6IB48   A0A0P5KND3   A0A0P5SU68   T1K991  

Pubmed

26354079    24845553    28528879    17994087    23537049    25315136    + More
25830018    20566863    28004739    15632085    24438588    17550304    25244985    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

RSAL01000140    RVE46091.1    KQ458863    KPJ04736.1    KK852667    KDR18932.1    + More
GFJQ02001843    JAW05127.1    GFWV01012965    MAA37694.1    CM000364    EDX12202.1    GFWV01010687    MAA35416.1    KB632258    ERL90815.1    GBYB01001096    JAG70863.1    APGK01049986    KB741164    ENN73443.1    KQ459988    KPJ18810.1    GBXI01012037    JAD02255.1    DS235354    EEB15059.1    ABLF02032569    GECU01014830    JAS92876.1    GEZM01033860    JAV84077.1    CH902617    EDV43113.2    OUUW01000013    SPP87819.1    KPU80090.1    SPP87820.1    CM000070    KRS99843.1    KRS99842.1    EAL27215.3    KRS99841.1    GGMS01004888    MBY74091.1    ATLV01025081    KE525369    KFB52135.1    AXCN02001377    JXJN01011355    GDIQ01190884    GDIQ01190883    JAK60842.1    GDIQ01226675    GDIQ01226674    GDIQ01226673    JAK25050.1    GGFK01004899    MBW38220.1    GDIQ01226672    JAK25053.1    GDIQ01209079    JAK42646.1    JH431584    GDIP01237306    JAI86095.1    CM000160    EDW96159.2    KRK02944.1    APCN01001015    KRK02943.1    GGFL01002038    MBW66216.1    KRK02942.1    GDIP01088772    JAM14943.1    AJWK01033084    GDIP01189158    JAJ34244.1    GDIP01107617    JAL96097.1    CH954181    EDV48362.1    GDIP01107618    JAL96096.1    ADMH02000167    ETN67521.1    GDIQ01238971    JAK12754.1    GDIQ01101120    GDIQ01101119    GDIQ01101117    JAL50606.1    GDIQ01047891    JAN46846.1    GDIQ01101118    JAL50608.1    GDIP01092672    JAM11043.1    GDIP01122567    JAL81147.1    GDIQ01161245    JAK90480.1    GDIQ01049041    JAN45696.1    AXCM01003602    GDIP01215007    JAJ08395.1    GDIP01230257    JAI93144.1    GDIP01230258    JAI93143.1    GDIP01136865    JAL66849.1    GDIQ01128211    JAL23515.1    GDIQ01113412    JAL38314.1    GDIQ01184689    JAK67036.1    GDIQ01047892    JAN46845.1    AE014297    AGB96151.1    GDIQ01168195    JAK83530.1    DQ494533    AAF55793.3    ABF29833.1    CH480842    EDW49639.1    GDIQ01033096    JAN61641.1    AGB96152.1    LRGB01003275    KZS03423.1    GDIP01232057    JAI91344.1    GDIP01167109    JAJ56293.1    GDIQ01068779    JAN25958.1    GDIP01008316    JAM95399.1    GDIP01041333    GDIP01007018    JAM62382.1    GDIP01161762    JAJ61640.1    GDIQ01068834    GDIQ01068833    GDIQ01068832    GDIQ01068831    JAN25906.1    GDIQ01007064    JAN87673.1    GDIQ01181536    JAK70189.1    GDIP01142565    JAL61149.1    CAEY01001890   

Proteomes

UP000283053    UP000053268    UP000027135    UP000000304    UP000076407    UP000030742    + More
UP000019118    UP000053240    UP000095300    UP000095301    UP000009046    UP000007819    UP000007801    UP000268350    UP000001819    UP000030765    UP000075884    UP000075886    UP000192221    UP000092460    UP000092443    UP000192223    UP000002282    UP000075840    UP000075880    UP000092461    UP000076408    UP000008711    UP000000673    UP000069272    UP000075883    UP000000803    UP000092445    UP000001292    UP000076858    UP000015104   

PRIDE

Q9VDJ9   

Pfam

PF16095   COR        + More
PF00069   Pkinase
PF13855   LRR_8
PF12796   Ank_2
PF00023   Ank
PF12799   LRR_4
PF04402   SIMPL
PF01602   Adaptin_N

Interpro

IPR032171   COR        + More
IPR020859   ROC_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR027417   P-loop_NTPase       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
IPR002110   Ankyrin_rpt       
IPR017441   Protein_kinase_ATP_BS       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR025875   Leu-rich_rpt_4       
IPR007497   DUF541       
IPR016024   ARM-type_fold       
IPR011989   ARM-like       
IPR002553   Clathrin/coatomer_adapt-like_N       
IPR000772   Ricin_B_lectin       

SUPFAM

SSF56112   SSF56112        + More
SSF52540   SSF52540       
SSF50998   SSF50998       
SSF48403   SSF48403       
SSF50978   SSF50978       
SSF48371   SSF48371       

Gene 3D

1.25.40.20     3.80.10.10     2.130.10.10     1.25.10.10    

CDD

cd00204  ANK

ProteinModelPortal

A0A3S2LWW4   A0A0N0PAG7   A0A067RI47   A0A1Z5LCM4   A0A293MA75   B4QS06   + More
A0A182X593   A0A293M524   U4ULB5   A0A0C9R2L5   N6T6X8   A0A0N0PEE2   A0A1I8PLG1   A0A1I8PLM4   A0A1I8M198   A0A1I8M187   A0A0A1WUR4   E0VNV3   X1WSM3   A0A1B6J140   A0A1Y1MLJ9   B3M0A7   A0A3B0KMK8   A0A0P8ZZT0   A0A3B0KHA4   A0A0R3NFE6   A0A0R3NL21   Q29AY4   A0A0R3NFC0   A0A2S2Q8Y9   A0A084WPJ1   A0A182N1F9   A0A182QR29   A0A1W4VAB8   A0A1B0BB95   A0A1W4V9W5   A0A1A9YFA6   A0A0N8BCM2   A0A0N8AZU8   A0A2M4ABT7   A0A0P5HX33   A0A0P5IRB8   A0A1W4WSZ2   A0A1W4WRZ4   T1IVJ9   A0A0P4XVS5   B4PPQ9   A0A0R1E0Y7   A0A182I9P3   A0A0R1E1H4   A0A2M4CLK3   A0A0R1E2E3   A0A0P5WAQ0   A0A182IMZ8   A0A1B0CX03   A0A0P5B7Q8   A0A182YEY4   A0A0P5UWM1   B3P348   A0A0P5UZY3   W5JTR7   A0A0N8AVG1   A0A0P5RIG2   A0A0P6FL56   A0A0P5SPY2   A0A182FA03   A0A0P5WWD9   A0A0N8CKL0   A0A0P5M3Y1   A0A0P6G6X9   A0A182LYZ5   A0A0P4ZM56   A0A0N7ZMR0   A0A0P4YIT6   A0A0P5SQB3   A0A0N8C006   A0A0P5QKI8   A0A0P5KJL2   A0A0N8E9S2   A0A0B4KH16   A0A1A9Z8E1   A0A0N8BKQ8   Q9VDJ9   B4II95   A0A0P6HGI5   A0A0B4KHT3   A0A164KNT3   A0A0N7ZM35   A0A0P5DYY4   A0A0P6E2G8   A0A0P6BX16   A0A0P5ZYU7   A0A0P5D7P1   A0A0P6EXZ9   A0A0P6IB48   A0A0P5KND3   A0A0P5SU68   T1K991  

PDB

5VO2     E-value=5.89285e-13,     Score=179

KEGG

101740132    no KO assigned | (RefSeq) leucine-rich repeat serine/threonine-protein kinase 1

GO

GO:0005524   GO:0004672   GO:1990033   GO:0071212   GO:0051683   GO:0044297   GO:0005795   GO:0005765   GO:0008088   GO:0031902   GO:0004674   GO:0017137   GO:0043198   GO:0040011   GO:1900242   GO:0006914   GO:0050808   GO:0050774   GO:0018105   GO:0048488   GO:0032418   GO:0042147   GO:0005829   GO:1901215   GO:0030123   GO:0006886   GO:0016192   GO:0031594   GO:0007528   GO:0048312   GO:0009267   GO:0061174   GO:2000331   GO:0090128   GO:0070507   GO:2000785   GO:0005737   GO:0005886   GO:0043195   GO:0006468   GO:0006508   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

329

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07804

Exp number, first 60 AAs:

0.06343

Total prob of N-in:

0.02916

outside

1  -  329

 

 

Pi

236.860932

Theta

161.021844

Tajima's D

2.209142

CLR

0.085035

CSRT

0.912054397280136

Interpretation

Uncertain