Gene

KWMTBOMO14871

Pre Gene Modal

BGIBMGA012186

Annotation

PREDICTED:_leucine-rich_repeat_serine/threonine-protein_kinase_1_[Bombyx_mori]

Location

Bomo_Chr24(-):16759052-16767525      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.303 PlasmaMembrane   Reliability : 1.705

CDS

ATGCTGTCACTCGCTGACCTGGGCCGGGTCGCGCTCGCCCTCGCCTGCGGGAGGTTGTTCTTGGTGACTGGCCAGGAGCCGGTAGCTGAAGGCTGCTTCGTGCTTTCCGAGCTGGGGGCGGCGCGTGAGCTGTGCTGTCTGGCCGCCGTGCCGACGCCGCATGGGTTCGAAGTGTGGGCTGGCGGCGACTCGCTGTCGGCGTACCGCGTGTCGGCCGAGGGGGTGTGCGGGGCGGAGGCGGTGGCGGCGGGGGGCAGGGTCGCTCTACTGGCGGCCGCCGCGGCGCTGCCCTGCGTCTACGCGTACACGCAGCCAGGCGTGTCAGTGTACCAGTACAGCGTGGTCACCAAGAAGGTCGGCTGCCGTCTGGACTGCAGCAAGCTGGTGCCCTGCTCCGAGAGCCTGCAGTCCATATCCTTGGACGAGCACTTCGATCAGTGCCTGTGTAGGGTGACTGCATTGAGCGCGGTCGGAGACGAAGTTTATGTTGGGACAGCGTGGGGCTGCGTCATAGTCGCTGATGCGGCGACGTTGCGTCCCATTACCGTCTGTCGGCCCTACGAGCAGGACGTGACCGCCATAATACCATTGCCGCAACCGAAAAAATCGAAAAGGTCTCCGATGCTGGCAACATTCGGCAACGGATACAGACCTCTGGTCCAAAGATACGCCCCGACTCAGACTAACAACGCACAGCAACAGTACAATGGCTACTACTGCCTGCTCTGGAATTCGAGGCATTGGCTCCCCGATTAA

Protein

MLSLADLGRVALALACGRLFLVTGQEPVAEGCFVLSELGAARELCCLAAVPTPHGFEVWAGGDSLSAYRVSAEGVCGAEAVAAGGRVALLAAAAALPCVYAYTQPGVSVYQYSVVTKKVGCRLDCSKLVPCSESLQSISLDEHFDQCLCRVTALSAVGDEVYVGTAWGCVIVADAATLRPITVCRPYEQDVTAIIPLPQPKKSKRSPMLATFGNGYRPLVQRYAPTQTNNAQQQYNGYYCLLWNSRHWLPD

Uniprot

H9JRM6   A0A2W1BBC5   A0A2A4KA82   A0A2A4KAR1   A0A2W1AZQ8   A0A2A4KB68   + More
A0A0N0PE33   A0A3S2LWW4   A0A0A9VV53   T1HIN4   A0A2R7WA29   A0A023F2Y8   A0A0T6BEJ6   A0A1Y1MLJ9   D6WA18   X1WSM3   A0A1W4WSZ2   A0A1W4WRZ4   A0A2S2NHT2   A0A1B6DQ53   A0A182UAM3   A0A0K2SVT6   A0A182GWL1   A0A336M2J0   A0A067RI47   A0A0K2SX28   A0A182X593   A0A293MA75   A0A0P6JRT1   A0A293M524   A0A182RM85   A0A1I8M187   A0A1I8M198   Q7QE59   A0A182I9P3   A0A182V8Y2   A0A182PFW2   A0A1I8PLG1   A0A1I8PLM4   A0A182LYZ5   B4QS06   A0A1Z5LCM4   A0A182N1F9   B4LWM2   A0A0Q9WRS1   A0A1J1HTA3   A0A182QR29   Q16YW4   A0A0M4EIV9   A0A3B0KMK8   A0A3B0KHA4   W5JTR7   B4II95   A0A0B4KH16   Q9VDJ9   A0A0B4KHT3   A0A182VV89   A0A1W4VAB8   A0A1W4V9W5   B3P348   A0A182FA03   A0A182STS1   B4JUC1   B3M0A7   A0A0K8UDG4   A0A0R3NFC0   A0A0P8ZZT0   A0A0R3NFE6   Q29AY4   A0A0R3NL21   A0A026WKY3   A0A0K8VH35   A0A0N0PA55   A0A3L8D628   A0A1B6J140   A0A0R1E0Y7   A0A0Q9XEN0   A0A0R1E2E3   B4K8G0   A0A182YEY4   A0A0R1E1H4   B4PPQ9   A0A0J7KXP6   A0A1B0BB95   A0A1A9YFA6   A0A084WPJ1   A0A1A9Z8E1   B4NFV0   A0A182IMZ8   A0A034VST8   E2AKZ5   A0A034VS24  

Pubmed

19121390    28756777    26354079    25401762    25474469    28004739    + More
18362917    19820115    26483478    24845553    26999592    25315136    12364791    14747013    17210077    17994087    28528879    17510324    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    24508170    30249741    17550304    25244985    24438588    25348373    20798317   

EMBL

BABH01031763    BABH01031764    BABH01031765    BABH01031766    BABH01031767    BABH01031768    + More
BABH01031769    BABH01031770    BABH01031771    KZ150507    PZC70647.1    NWSH01000005    PCG80989.1    PCG80988.1    KZ150565    PZC70519.1    PCG80990.1    KQ459988    KPJ18809.1    RSAL01000140    RVE46091.1    GBHO01043502    JAG00102.1    ACPB03012567    KK854504    PTY16409.1    GBBI01002997    JAC15715.1    LJIG01001219    KRT85721.1    GEZM01033860    JAV84077.1    KQ971312    EEZ98574.2    ABLF02032569    GGMR01003707    MBY16326.1    GEDC01009496    JAS27802.1    HACA01000542    HACA01000543    HACA01000544    CDW17903.1    JXUM01093607    KQ564068    KXJ72845.1    UFQT01000309    SSX23103.1    KK852667    KDR18932.1    HACA01000541    CDW17902.1    GFWV01012965    MAA37694.1    GDUN01001016    JAN94903.1    GFWV01010687    MAA35416.1    AAAB01008847    EAA06914.5    APCN01001015    AXCM01003602    CM000364    EDX12202.1    GFJQ02001843    JAW05127.1    CH940650    EDW67687.2    KRF83412.1    CVRI01000014    CRK89702.1    AXCN02001377    CH477507    EAT39824.1    CP012526    ALC46696.1    OUUW01000013    SPP87819.1    SPP87820.1    ADMH02000167    ETN67521.1    CH480842    EDW49639.1    AE014297    AGB96151.1    DQ494533    AAF55793.3    ABF29833.1    AGB96152.1    CH954181    EDV48362.1    CH916374    EDV91091.1    CH902617    EDV43113.2    GDHF01029070    GDHF01027711    GDHF01020867    JAI23244.1    JAI24603.1    JAI31447.1    CM000070    KRS99841.1    KPU80090.1    KRS99843.1    EAL27215.3    KRS99842.1    KK107185    EZA55764.1    GDHF01014136    JAI38178.1    KQ458863    KPJ04735.1    QOIP01000012    RLU15689.1    GECU01014830    JAS92876.1    CM000160    KRK02944.1    CH933806    KRG02184.1    KRK02942.1    EDW16542.1    KRK02943.1    EDW96159.2    LBMM01002255    KMQ95071.1    JXJN01011355    ATLV01025081    KE525369    KFB52135.1    CH964251    EDW83167.1    GAKP01014339    JAC44613.1    GL440425    EFN65912.1    GAKP01014337    GAKP01014335    JAC44615.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000283053    UP000015103    UP000007266    + More
UP000007819    UP000192223    UP000075902    UP000069940    UP000249989    UP000027135    UP000076407    UP000075900    UP000095301    UP000007062    UP000075840    UP000075903    UP000075885    UP000095300    UP000075883    UP000000304    UP000075884    UP000008792    UP000183832    UP000075886    UP000008820    UP000092553    UP000268350    UP000000673    UP000001292    UP000000803    UP000075920    UP000192221    UP000008711    UP000069272    UP000075901    UP000001070    UP000007801    UP000001819    UP000053097    UP000053268    UP000279307    UP000002282    UP000009192    UP000076408    UP000036403    UP000092460    UP000092443    UP000030765    UP000092445    UP000007798    UP000075880    UP000000311   

PRIDE

H9JRM6    Q9VDJ9   

Pfam

PF00069   Pkinase        + More
PF12796   Ank_2
PF16095   COR
PF13855   LRR_8
PF00078   RVT_1
PF00023   Ank
PF12799   LRR_4
PF01602   Adaptin_N
PF07714   Pkinase_Tyr

Interpro

IPR020683   Ankyrin_rpt-contain_dom        + More
IPR020859   ROC_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR032171   COR       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR001611   Leu-rich_rpt       
IPR027417   P-loop_NTPase       
IPR032675   LRR_dom_sf       
IPR011009   Kinase-like_dom_sf       
IPR002110   Ankyrin_rpt       
IPR000477   RT_dom       
IPR008271   Ser/Thr_kinase_AS       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR025875   Leu-rich_rpt_4       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR016024   ARM-type_fold       
IPR011989   ARM-like       
IPR002553   Clathrin/coatomer_adapt-like_N       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       

SUPFAM

SSF56112   SSF56112        + More
SSF52540   SSF52540       
SSF48403   SSF48403       
SSF50998   SSF50998       
SSF56219   SSF56219       
SSF50978   SSF50978       
SSF48371   SSF48371       

Gene 3D

1.25.40.20     3.80.10.10     3.60.10.10     2.130.10.10     1.25.10.10    

CDD

cd00204  ANK

ProteinModelPortal

H9JRM6   A0A2W1BBC5   A0A2A4KA82   A0A2A4KAR1   A0A2W1AZQ8   A0A2A4KB68   + More
A0A0N0PE33   A0A3S2LWW4   A0A0A9VV53   T1HIN4   A0A2R7WA29   A0A023F2Y8   A0A0T6BEJ6   A0A1Y1MLJ9   D6WA18   X1WSM3   A0A1W4WSZ2   A0A1W4WRZ4   A0A2S2NHT2   A0A1B6DQ53   A0A182UAM3   A0A0K2SVT6   A0A182GWL1   A0A336M2J0   A0A067RI47   A0A0K2SX28   A0A182X593   A0A293MA75   A0A0P6JRT1   A0A293M524   A0A182RM85   A0A1I8M187   A0A1I8M198   Q7QE59   A0A182I9P3   A0A182V8Y2   A0A182PFW2   A0A1I8PLG1   A0A1I8PLM4   A0A182LYZ5   B4QS06   A0A1Z5LCM4   A0A182N1F9   B4LWM2   A0A0Q9WRS1   A0A1J1HTA3   A0A182QR29   Q16YW4   A0A0M4EIV9   A0A3B0KMK8   A0A3B0KHA4   W5JTR7   B4II95   A0A0B4KH16   Q9VDJ9   A0A0B4KHT3   A0A182VV89   A0A1W4VAB8   A0A1W4V9W5   B3P348   A0A182FA03   A0A182STS1   B4JUC1   B3M0A7   A0A0K8UDG4   A0A0R3NFC0   A0A0P8ZZT0   A0A0R3NFE6   Q29AY4   A0A0R3NL21   A0A026WKY3   A0A0K8VH35   A0A0N0PA55   A0A3L8D628   A0A1B6J140   A0A0R1E0Y7   A0A0Q9XEN0   A0A0R1E2E3   B4K8G0   A0A182YEY4   A0A0R1E1H4   B4PPQ9   A0A0J7KXP6   A0A1B0BB95   A0A1A9YFA6   A0A084WPJ1   A0A1A9Z8E1   B4NFV0   A0A182IMZ8   A0A034VST8   E2AKZ5   A0A034VS24  

KEGG

101740132    no KO assigned | (RefSeq) leucine-rich repeat serine/threonine-protein kinase 1

GO

GO:0004672   GO:0005524   GO:1900242   GO:0040011   GO:0043198   GO:0006914   GO:0005765   GO:0005795   GO:0044297   GO:0071212   GO:0051683   GO:1990033   GO:0017137   GO:0004674   GO:0031902   GO:0008088   GO:0032418   GO:1901215   GO:0005829   GO:0042147   GO:0048488   GO:0018105   GO:0050808   GO:0050774   GO:0031594   GO:0007528   GO:0048312   GO:0009267   GO:0061174   GO:2000331   GO:0090128   GO:0070507   GO:2000785   GO:0005737   GO:0005886   GO:0043195   GO:0030123   GO:0006886   GO:0016192  

Length:

251

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.54691

Exp number, first 60 AAs:

0.0988700000000001

Total prob of N-in:

0.01980

outside

1  -  251

 

 

Pi

254.683681

Theta

165.06037

Tajima's D

1.978475

CLR

0.34952

CSRT

0.87675616219189

Interpretation

Uncertain