Gene

KWMTBOMO14870  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012166

Annotation

putative_WD_repeat_domain_34_[Operophtera_brumata]

Location

Bomo_Chr24(+):16750776-16752183      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.544

CDS

ATGTGGAATTTGAGTGGATATGATAGCGAAGCGGTCGGATTCGATTCTGTGGCTGTTAAAAAAACCGAAGACGCGAGCACCGGCACTCAAACTACAGAATTCTTTGAAGCGGCCGTCGCAACTCAAACTGTTGCTTACAAAGACGGTTCATCGATGACCTCTCCTACAGAGGATTTGACGACAAAAGACGTAAAATATTCGGCAGCCAATTTAAATGCGTTCCTCCAAAGAGTAATGCCGGGTATGCTTGAGCAGCTAGACGAGAACAAAGAAAACGCATACGAGTCTTCGGAATCTGACGAGGATAATGAAATTTTGACAGCTAAATTGGTACAAGAGCTAAAGGTACGAGAAGTGCAAGGCAGCGGTGATCAGGCACTGTCTGTACTAGACCTATCTTGGAGTAATACCGGCAACTCGTTAGCCGTGTCTCTAGGACAGAAGCAGCACGAGAATTGGTGCACAGATAACGGTTTAATAAGGTTCTATACGGTCAAAGTCAGTGCCGGCGACAAATTAGTGCACAGCATGGATATCAACGAGAAAAACTGTGTTTCAGTATTGAAATATCATCCGTCGGTCGCGGCTCTGTTCGTCTACGGGACGGTTACGGGCGAGATTGTGATCTGCGACCTTAGAAATAACGATGAACTTCAAATGACGTCGCCGTCTGGTACGCACGGTTCGAAAAGGGTCACGGCGCTTTCTTGGCTGGAGTCCACAACCGCTGAAACGTTTTTTGCGATCCACATCAACAATACAGGCAAGCGAAGGGCCTCGACCGATCGCATACTAGTTTCATCCGGTAGCGACGGAACAATCGTCGCATGGCACGTCAACGCTGACAACAAAACGTTTGAAGCCATTGTAACCTACTCCGTGAACGGAGCCCGCAAGATGGCCGCCCCGGATATCAGCTGTTTTGATTTCATCAACACGTTTCCGCTACGTCCGACGGGCGATAAAATTTCGAACGACATTTTCGTGGTCGGCACGAATGTCGGTAATTTATTTTTGTGTAATATAAAGAACGCTCAGAGCGCAGCGCATAGCGGCCACGTTGATCCGGTCAGCGATGTTCTAGAAAGCCACGCGACCTGCATTTTGGCTGTTACGTTTCACCAAGATAAGCCTGGCGTTTTTATAACACTGTCCATTGATTCCGAATTGAGGATATATAATGTTAAACAGGCCAGTCCCTTGAAGGTGATTTTGCAGTAA

Protein

MWNLSGYDSEAVGFDSVAVKKTEDASTGTQTTEFFEAAVATQTVAYKDGSSMTSPTEDLTTKDVKYSAANLNAFLQRVMPGMLEQLDENKENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDLSWSNTGNSLAVSLGQKQHENWCTDNGLIRFYTVKVSAGDKLVHSMDINEKNCVSVLKYHPSVAALFVYGTVTGEIVICDLRNNDELQMTSPSGTHGSKRVTALSWLESTTAETFFAIHINNTGKRRASTDRILVSSGSDGTIVAWHVNADNKTFEAIVTYSVNGARKMAAPDISCFDFINTFPLRPTGDKISNDIFVVGTNVGNLFLCNIKNAQSAAHSGHVDPVSDVLESHATCILAVTFHQDKPGVFITLSIDSELRIYNVKQASPLKVILQ

Uniprot

H9JRK6   A0A0L7LTN1   A0A2H1V0N3   A0A2H1VB68   A0A2W1BH17   A0A2A4J725   + More
A0A2W1BAI2   A0A212EQ12   A0A0N1PGG3   A0A0N0PE25   A0A067QLH3   A0A2J7PGA3   A0A0L7RJH3   A0A1B6H2D7   K1R5F1   A0A1B6J4Y6   E9IZE3   A0A1W4WBI6   A0A195AU54   A0A1B6KFN5   E2BE55   A0A151WW63   A0A088ADF5   A0A195CXV0   A0A151J3A4   E2AYY3   A0A158P0V5   A0A1B6C6Q1   W4XZX2   A0A210R242   A0A2A3EF88   A0A2C9K504   A0A369RSF3   K7JTB0   A0A151K011   F4WD63   T1IQJ7   A0A0M8ZZE5   A0A026WFJ7   V4A149   C3ZGK1   A0A2J7PGA4   A0A154PNQ4   A0A1S3JBW9   A0A2G8KLK2   A0A0B6ZEV5   A0A075A6H2   B3S2X2   A0A2T7PAM8   A0A061RH73   A0A224XMC4   A0A0B6ZEN6   A0A3S3PDS4   A0A023F792   A7RZ65   A0A1W2WMF6   F7A027   A0A1Y2B9R5   A0A2B4RGB8   A0A1Y2C1L9   A0A0P4VUG9   R4G873   T1KJD3   C1N0M5   R7TIB5   A0A0L8GP68   A0A0K8SAE5   A0A0A9XD44   A0A2P6MX94   A0A091V9A6   A0A091STK9   H3B3P3   A0A1S8VZQ4   A0A146L241   A0A091TXH6   A0A1Y1HJ38   A0A094KBM5   A0A091NK25   A0A2P6KS44   A0A3Q0K2W3   A0A3Q3QVM3   A0A3Q0K5F3   A0A0L0HQL4   A0A091L2A3   A0A3Q3NB38   W5UAC6   A0A2D0SZE4   A0A2R6X6N6   G0UKK9   U3JFB8   D2UY63   T2M823   A0A2D0SYV4   A0A3B3SZI3   A0A093R493   A0A060XS85   A0A3P8Z053  

Pubmed

19121390    26227816    28756777    22118469    26354079    24845553    + More
22992520    21282665    20798317    21347285    28812685    15562597    30042472    20075255    21719571    24508170    30249741    23254933    18563158    29023486    18719581    25474469    17615350    12481130    15114417    27129103    19359590    25401762    29378020    9215903    26823975    24865297    23127152    22331916    20211133    24065732    29240929    24755649    25069045   

EMBL

BABH01031771    JTDY01000147    KOB78596.1    ODYU01000137    SOQ34405.1    ODYU01001599    + More
SOQ38046.1    KZ150412    PZC70973.1    NWSH01002937    PCG67250.1    PZC70974.1    AGBW02013337    OWR43585.1    KQ458863    KPJ04710.1    KQ459988    KPJ18779.1    KK853289    KDR08919.1    NEVH01025635    PNF15363.1    KQ414581    KOC71025.1    GECZ01000952    JAS68817.1    JH816363    EKC40953.1    GECU01013472    JAS94234.1    GL767121    EFZ14057.1    KQ976738    KYM75706.1    GEBQ01029742    JAT10235.1    GL447755    EFN86042.1    KQ982691    KYQ52100.1    KQ977141    KYN05407.1    KQ980300    KYN16811.1    GL444028    EFN61353.1    ADTU01005842    GEDC01028115    JAS09183.1    AAGJ04158193    AAGJ04158194    AAGJ04158195    AAGJ04158196    NEDP02000770    OWF55059.1    KZ288271    PBC29816.1    NOWV01000268    RDD37162.1    AAZX01000105    KQ981414    KYN41890.1    GL888084    EGI67871.1    AFFK01018331    KQ435812    KOX72733.1    KK107235    QOIP01000009    EZA54890.1    RLU18605.1    KB202444    ESO90367.1    GG666619    EEN48337.1    PNF15362.1    KQ434980    KZC13094.1    MRZV01000500    PIK48818.1    HACG01020198    CEK67063.1    KL596621    KER33962.1    DS985248    EDV22864.1    PZQS01000005    PVD30466.1    GBEZ01016124    JAC70099.1    GFTR01006836    JAW09590.1    HACG01020199    CEK67064.1    NCKU01001065    RWS13203.1    GBBI01001609    JAC17103.1    DS469556    EDO43231.1    MCGO01000076    ORY31504.1    LSMT01000662    PFX15302.1    MCGO01000033    ORY40911.1    GDKW01000404    JAI56191.1    GAHY01001472    JAA76038.1    CAEY01000119    GG663744    EEH54298.1    AMQN01002615    KB309694    ELT93583.1    KQ420929    KOF78816.1    GBRD01015707    JAG50119.1    GBHO01045524    GBHO01026881    GBHO01026880    GBHO01026879    JAF98079.1    JAG16723.1    JAG16724.1    JAG16725.1    MDYQ01000337    PRP76276.1    KK733774    KFQ99369.1    KK486152    KFQ62037.1    AFYH01037965    AFYH01037966    AFYH01037967    AFYH01037968    AFYH01037969    LYON01000438    OON07203.1    GDHC01016005    GDHC01009297    JAQ02624.1    JAQ09332.1    KK467950    KFQ82961.1    DF236963    GAQ78524.1    KL347518    KFZ56773.1    KL384538    KFP89432.1    MWRG01006129    PRD29160.1    KQ257452    KND03084.1    KK764264    KFP45878.1    JT410051    AHH38913.1    KZ772705    PTQ41764.1    HE575316    CCC89914.1    AGTO01010820    GG738845    EFC50738.1    HAAD01001885    CDG68117.1    KL224938    KFW65854.1    FR905495    CDQ79735.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053268    UP000053240    + More
UP000027135    UP000235965    UP000053825    UP000005408    UP000192223    UP000078540    UP000008237    UP000075809    UP000005203    UP000078542    UP000078492    UP000000311    UP000005205    UP000007110    UP000242188    UP000242457    UP000076420    UP000253843    UP000002358    UP000078541    UP000007755    UP000053105    UP000053097    UP000279307    UP000030746    UP000001554    UP000076502    UP000085678    UP000230750    UP000009022    UP000245119    UP000285301    UP000001593    UP000008144    UP000193642    UP000225706    UP000015104    UP000001876    UP000014760    UP000053454    UP000241769    UP000053605    UP000008672    UP000189906    UP000054558    UP000261600    UP000053201    UP000261640    UP000221080    UP000016665    UP000006671    UP000261540    UP000054081    UP000193380    UP000265140   

PRIDE

H9JRK6   

Pfam

PF00400   WD40

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JRK6   A0A0L7LTN1   A0A2H1V0N3   A0A2H1VB68   A0A2W1BH17   A0A2A4J725   + More
A0A2W1BAI2   A0A212EQ12   A0A0N1PGG3   A0A0N0PE25   A0A067QLH3   A0A2J7PGA3   A0A0L7RJH3   A0A1B6H2D7   K1R5F1   A0A1B6J4Y6   E9IZE3   A0A1W4WBI6   A0A195AU54   A0A1B6KFN5   E2BE55   A0A151WW63   A0A088ADF5   A0A195CXV0   A0A151J3A4   E2AYY3   A0A158P0V5   A0A1B6C6Q1   W4XZX2   A0A210R242   A0A2A3EF88   A0A2C9K504   A0A369RSF3   K7JTB0   A0A151K011   F4WD63   T1IQJ7   A0A0M8ZZE5   A0A026WFJ7   V4A149   C3ZGK1   A0A2J7PGA4   A0A154PNQ4   A0A1S3JBW9   A0A2G8KLK2   A0A0B6ZEV5   A0A075A6H2   B3S2X2   A0A2T7PAM8   A0A061RH73   A0A224XMC4   A0A0B6ZEN6   A0A3S3PDS4   A0A023F792   A7RZ65   A0A1W2WMF6   F7A027   A0A1Y2B9R5   A0A2B4RGB8   A0A1Y2C1L9   A0A0P4VUG9   R4G873   T1KJD3   C1N0M5   R7TIB5   A0A0L8GP68   A0A0K8SAE5   A0A0A9XD44   A0A2P6MX94   A0A091V9A6   A0A091STK9   H3B3P3   A0A1S8VZQ4   A0A146L241   A0A091TXH6   A0A1Y1HJ38   A0A094KBM5   A0A091NK25   A0A2P6KS44   A0A3Q0K2W3   A0A3Q3QVM3   A0A3Q0K5F3   A0A0L0HQL4   A0A091L2A3   A0A3Q3NB38   W5UAC6   A0A2D0SZE4   A0A2R6X6N6   G0UKK9   U3JFB8   D2UY63   T2M823   A0A2D0SYV4   A0A3B3SZI3   A0A093R493   A0A060XS85   A0A3P8Z053  

PDB

6F3A     E-value=0.0015354,     Score=99

KEGG

101735458    K22868 WD repeat-containing protein 34 | (RefSeq) WD repeat-containing protein 34-like

GO

GO:0042073   GO:0005868   GO:0007018   GO:0045503   GO:0045504   GO:0097014   GO:0005929   GO:0060271   GO:0005829   GO:0005515   GO:0003676   GO:0003979   GO:0006508   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

406

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0797399999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00672

outside

1  -  406

 

 

Pi

225.469453

Theta

181.685683

Tajima's D

0.704115

CLR

0

CSRT

0.579821008949553

Interpretation

Uncertain