SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14864
Pre Gene Modal
BGIBMGA012189
Annotation
PREDICTED:_segment_polarity_protein_dishevelled?_partial_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.4
 

Sequence

CDS
ATGGAGGAAACGAAAGTAATTTATTACATAGACGATGAAGAAACTCCGTATTTGGTTAAAATACCTATTTCACCCGAGAAAGTTACGTTATTAGACTTCAAAAATCAGTTAAACAGACCGAACTATAAATTTTTCTTTAAATCGATGGACGATGATTTTGGTGTTGTTAAAGAAGAAATAGTCGATGATAACGCTCATTTGCCGTGTTTTAATGGTCGTGTTGTGTCGTGGCTCGTATCCGCCGAGGGCTCGAACCCCTCAGACGGCGGCTCCCAGTGTACGGACAGTAACGCAGGCAAGACAAAACCAGCTCATGGAGCTCCAGCGGCGCCTCTCACGAGGGACACCTGTACGGATACGGACAGTACGATAAGCTCCCGACCGGGGCACAGAGCTTCCTGCGACAAATACAAATATAGGGGCCTCCGAATCAATGGACACTCGAAATTTGGCAATCATGGCCTAGAGTATGAGACTGCTTCGGTATTAAGCTCGGATTTAGACTCGACTAGCTTGTTTGACAGTCAATCTGAAATAACCAATACAACAGGTCGCCACACAAACGCTTCAGTAGACAGAGCACTAACAGAGTGTAGCAGTGTATCGCATCTTCAAGTGAGTTCGCGAAAACGACCTCAAAGACGGCGGAAAAGACCTCAAGTTATGTCCCGAACGTCATCGTACTCCTCGATCACGGACTCTACAATGTCTATGCACATTATCACTGTTACTTTAAATATGGACACAGTCAATTTTCTGGGGATCTCGATAGTGGGGCAGTCCAACAAGGGTGGGGATGGTGGAATTTACGTCGGAAGTATCATGAAGGGCGGTGCTGTGGCCCTAGACGGAAGAATAGAGCCCGGTGACATGATTCTGCAGGTCAATGATGTCAATTTCGAAGATATGACCAATGATGAAGCTGTCCGTGTGCTCAGGGAGGTCGTTCAGAAGCCTGGACCCATCAAACTGGTGGTAGCTAAGTGCTGGGATCCCAACCCTAAAGGATACTTTACCATACCCAGAACAGAACCTGTCAGACCAATAGACCCAGGGGCATGGGTGGCTCACACGCAGGCCCTTCGCGAGGCGTATCCGCCGCCGCCTCCCTCGTTGTCCGCGCTGCCGGTGTCGTCGGTGTCGGAGCGCGGCGCTTCGGACGCGAGCACGGTCCCGGCCGGAGCCCTAGAGCCCCAGCTCTCTGTCAACATGGACATGGCTGTCGTCGTGAGGGCCATGCTGAGGCCGGATTCTGGACTGGAGATCCGTGATCGGATGTGGTTGAAGATAACTATACCTAATGCATTCATCGGTGCTGACATAGTGGACTGGATACTACAGCACGTAGCCGGGATAGCTGACCGGAGAGACGCAAGGAAATATGCCTCACATATGCTCAAGGCCGGCTTCATAAGGCACACAGTTAACAAGATAACGTTCAGCGAGCAGTGTTACTACGTGGCGGGCGCGGGCTGGCTGGGCGGCGAGCTGTCCTCGCTCAGGATACGTGCTGACGACGCTGACGTCAAGCCCCTCCCGGACCCGGGCCTCATGGGCCCAGGATACGTACCATATGCGGGCTCGTATGGCTACCAGCCCATACCCTTCAAGTATTCCTGTGCCAACAGCGAACACACCATATACGGGTGA
Protein
MEETKVIYYIDDEETPYLVKIPISPEKVTLLDFKNQLNRPNYKFFFKSMDDDFGVVKEEIVDDNAHLPCFNGRVVSWLVSAEGSNPSDGGSQCTDSNAGKTKPAHGAPAAPLTRDTCTDTDSTISSRPGHRASCDKYKYRGLRINGHSKFGNHGLEYETASVLSSDLDSTSLFDSQSEITNTTGRHTNASVDRALTECSSVSHLQVSSRKRPQRRRKRPQVMSRTSSYSSITDSTMSMHIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDVNFEDMTNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKGYFTIPRTEPVRPIDPGAWVAHTQALREAYPPPPPSLSALPVSSVSERGASDASTVPAGALEPQLSVNMDMAVVVRAMLRPDSGLEIRDRMWLKITIPNAFIGADIVDWILQHVAGIADRRDARKYASHMLKAGFIRHTVNKITFSEQCYYVAGAGWLGGELSSLRIRADDADVKPLPDPGLMGPGYVPYAGSYGYQPIPFKYSCANSEHTIYG

Summary

EMBL
KZ150224    PZC72067.1    NWSH01000116    PCG79384.1    BABH01031778    KQ458863    + More
KPJ04713.1    ODYU01006350    SOQ48124.1    KQ459988    KPJ18782.1    GEZM01052535    JAV74450.1    GEZM01052538    GEZM01052536    JAV74448.1    KQ971348    EFA04851.1    KK852531    KDR21875.1    GEBQ01011344    JAT28633.1    GEBQ01006605    JAT33372.1    NEVH01011190    PNF32098.1    PNF32097.1    LJIG01009538    KRT82879.1    GEDC01016038    JAS21260.1    GEDC01018587    JAS18711.1    KQ435832    KOX71684.1    KQ435036    KZC14074.1    GBYB01002437    JAG72204.1    GL444275    EFN61109.1    KK107597    EZA48607.1    GBYB01011061    JAG80828.1    FX986050    BBF98007.1    GL453694    EFN75659.1    KQ981560    KYN39995.1    KQ978379    KYM94383.1    GBYB01011064    JAG80831.1    KQ976599    KYM79519.1    APGK01044224    KB741021    KB632003    ENN75079.1    ERL87857.1    KQ414661    KOC65563.1    KQ980800    KYN12806.1    KZ288317    PBC28302.1    ACPB03010146    GBHO01033882    JAG09722.1    GDHC01016131    JAQ02498.1    GDHC01005842    JAQ12787.1    ATLV01018713    KE525247    KFB43311.1    GGMS01007514    MBY76717.1    GDUN01000242    JAN95677.1    CH477492    EAT40012.1    GFDL01013463    JAV21582.1    GFDL01014010    JAV21035.1    GFDL01003219    JAV31826.1    DS232620    EDS44151.1    GFDL01003218    JAV31827.1    JXUM01007726    KQ560246    KXJ83593.1    AXCN02000090    GFDL01003227    JAV31818.1    GL761885    EFZ22598.1    ABLF02017872    GGFM01007404    MBW28155.1    GFDF01010549    JAV03535.1    ADMH02001625    ETN61733.1    GFDF01010510    JAV03574.1    GGFK01008502    MBW41823.1    AXCM01001375    GDIQ01181509    JAK70216.1    UFQS01000201    UFQT01000201    SSX01252.1    SSX21632.1    GDIQ01115874    JAL35852.1    AAAB01008898    EAA09207.4    GDIQ01220401    JAK31324.1    GGFJ01003052    MBW52193.1    GGFL01003853    MBW68031.1    JH431830    GDIQ01125074    JAL26652.1    GDIQ01210395    JAK41330.1    GDIP01144681    JAJ78721.1    GDIQ01268244    GDIQ01035025    JAN59712.1    GDIP01195177    JAJ28225.1    GGFM01002393    MBW23144.1    GFXV01007359    MBW19164.1    GDIP01051151    JAM52564.1    GDIP01148343    JAJ75059.1    GDIP01144680    JAJ78722.1    GDIP01072903    JAM30812.1    GDIQ01210394    JAK41331.1    GANO01002620    JAB57251.1    GANO01002621    JAB57250.1    GDIP01063804    JAM39911.1    GDIQ01268245    GDIQ01051719    JAN43018.1    GDIP01072902    JAM30813.1    GDIQ01096384    JAL55342.1    GDIP01062144    JAM41571.1    GDIQ01254390    JAJ97334.1    GDIQ01254389    JAJ97335.1    GDIP01056542    JAM47173.1    GDIQ01070299    JAN24438.1    GDIQ01115875    JAL35851.1   
Pfam
PF00595   PDZ        + More
PF00610   DEP
PF00778   DIX
PF02377   Dishevelled
PF12316   Dsh_C
Interpro
IPR029071   Ubiquitin-like_domsf        + More
IPR008342   DVL3       
IPR000591   DEP_dom       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR003351   Dishevelled_protein_dom       
IPR038207   DIX_dom_sf       
IPR015506   Dsh/Dvl-rel       
IPR008339   Dishevelled_fam       
IPR036390   WH_DNA-bd_sf       
IPR001158   DIX       
IPR036388   WH-like_DNA-bd_sf       
IPR026542   Dsh       
IPR024580   Dishevelled_C-dom       
SUPFAM
SSF50156   SSF50156        + More
SSF46785   SSF46785       
SSF54236   SSF54236       
Gene 3D
PDB
2REY     E-value=2.32732e-39,     Score=409

Ontologies

Topology

Length:
549
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.2214
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00517
outside
1  -  549
 
 

Population Genetic Test Statistics

Pi
264.695938
Theta
171.55599
Tajima's D
1.877682
CLR
0.030773
CSRT
0.866956652167392
Interpretation
Uncertain
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