SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14857
Annotation
PREDICTED:_uncharacterized_protein_LOC106713162_[Papilio_machaon]
Location in the cell
Mitochondrial   Reliability : 3.194
 

Sequence

CDS
ATGAATATTCTTGCCACAAAACATGAACAAAAAGACTTCCGAGGTTTCTGGAAACAAACAAGGAAATTGAGTCCAAAAGCTGGTATCCCGGTGAGCATTGATGGCGAGTGTGAGCCTGTGAGGATTGCTAATCTGTTTAAGAACCATTTCAGGGTACAATCACCCGGTCAGTTAAGTAGAGGTGCTGATGCTGGGGTGGTGGACCCGAGTCGACCCTCGCTAGTACCACCTCGGATAACAACGAAGGAAATAACTAAAATTATAATGAATATGACTAAGGGTAAGTCTCCCGGTCATGACCACCTCAGCATTGAGCACTTTCAACACGCTGGTCCGCATTTACCTAGATTGCTAGCGCTCTTATATACCTTCTGTATCAGACATTCGTATCTGCCCGGGGCGTTCATGAGAACGGTCGTTGTCCCGATTTTAAAAAATAAAACAGGCGACGTATCGGATCGTAACAACTATCGGCCGATCTCCCTGGCAACCATAACTGCTAAGGTACTCGATGCAGTGCTCGAGCGGCAGGTGAGTGATCATCTTAAATTAAGTGATGCTCAGTTCGGTTTTAGACCGATGTTATCTACCGAGTGTGCAATCCTGTCGCTAAAGCATGTGGTGGGATACTACACGGAGAGGAATACGCCTGTTTATGCAGTGTTTCTCGATCTTTCGAAGGCTTTCGACCTAGTCAGGTACGACTTGTTGTGGGGTAAGTTGAGGCAGACGGGCGTACCCGGACCTTACGTGGACTTGTTCTCCCATTGGTACGAGTATCAGACCAATCAGGTAAGATGGTCAAACACACTTTCGGAGGAGTACAGGTTGGAATGCGGGGTGAGGCAGGGGGGCTTAACCTCACCGGCGCTTTTCAACCTGTATATTAATGAGTTGATCGAGGCACTCGGTGAGGCACGTGTCGGCTGCTCGATTGATGGTCACTGTGTGAACAGCATCAGTTACGCTGACGACATGGTGCTGTTGAGCCCATCGATCGGTGTTCTCCGGCGGTTGTTGTCCATCTGTGAGAGGTACGCGGAATCTCACGGGCTCCGCTATAATGTTAAAAAAAGTGAACTGCTCGTCTTTAAGGCAGCAAAGACAAAACCGAGTTATGTGCCACCAGTGACGCTCGGAGGTGCTCCACTGAAGAGGGTTACTGAGTTCAAATACCTTGGCCATATTGTAACTGAGCACCTTAAAGACGATGCAGATATTGAAAGGGAACGGAGAGCGTTGGCTGTCCGCTGCGGTATGCTGGCCCGCAGGTTGGCCCGTTGTACCGCACAGGTTAAGGATGTTGTTGGGGCTCCCGCGGTACTGTAG
Protein
MNILATKHEQKDFRGFWKQTRKLSPKAGIPVSIDGECEPVRIANLFKNHFRVQSPGQLSRGADAGVVDPSRPSLVPPRITTKEITKIIMNMTKGKSPGHDHLSIEHFQHAGPHLPRLLALLYTFCIRHSYLPGAFMRTVVVPILKNKTGDVSDRNNYRPISLATITAKVLDAVLERQVSDHLKLSDAQFGFRPMLSTECAILSLKHVVGYYTERNTPVYAVFLDLSKAFDLVRYDLLWGKLRQTGVPGPYVDLFSHWYEYQTNQVRWSNTLSEEYRLECGVRQGGLTSPALFNLYINELIEALGEARVGCSIDGHCVNSISYADDMVLLSPSIGVLRRLLSICERYAESHGLRYNVKKSELLVFKAAKTKPSYVPPVTLGGAPLKRVTEFKYLGHIVTEHLKDDADIERERRALAVRCGMLARRLARCTAQVKDVVGAPAVL

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
GAIX01014011    JAA78549.1    NWSH01000012    PCG80896.1    KZ150039    PZC74591.1    + More
RSAL01000132    RVE46368.1    KZ150185    PZC72467.1    KZ149940    PZC76937.1    RSAL01004459    RVE40147.1    NHMN01024349    PZC87407.1    KZ150122    PZC73158.1    KZ150625    PZC70440.1    KZ149956    PZC76465.1    RSAL01000010    RVE53771.1    GCES01018090    JAR68233.1    HAEJ01003895    SBS44352.1    GCES01119762    JAQ66560.1    GCES01122004    JAQ64318.1    GCES01120657    JAQ65665.1    GDRN01099830    JAI58698.1    DMQF01000358    HAO15222.1    DMQF01000507    HAO15811.1    DMQF01000051    HAO14134.1    DNUT01000366    HBI40674.1    GEZM01094272    GEZM01094271    JAV55745.1    REGN01000623    RNA40614.1    AAGJ04127121    AAGJ04127122    AAGJ04127123    JARK01001412    EYC06431.1    UFQT01000284    SSX22780.1    JARK01001379    EYC13704.1    JARK01001398    EYC09120.1    CM003613    KYP56875.1    JARK01001345    EYC27241.1    NCKU01002988    RWS08398.1    KQ484600    KYP34423.1    AAGJ04171899    GGMS01004979    MBY74182.1    GEGO01006907    JAR88497.1    GFTR01008526    JAW07900.1    RQTK01000700    RUS75926.1    NSIT01000254    PJE78133.1    AAGJ04093867    FJ265563    ADI61831.1    GBHO01021345    JAG22259.1    JARK01001422    EYC04705.1    DMQF01000521    HAO15860.1    GFTR01008507    JAW07919.1    GBHO01042545    GBRD01013465    JAG01059.1    JAG52361.1    GDHC01021277    JAP97351.1   
Pfam
PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF12832   MFS_1_like
PF00089   Trypsin
PF00057   Ldl_recept_a
PF03372   Exo_endo_phos
PF01392   Fz
Interpro
IPR000477   RT_dom        + More
IPR024989   MFS_assoc_dom       
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR033116   TRYPSIN_SER       
IPR036790   Frizzled_dom_sf       
IPR020067   Frizzled_dom       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR001190   SRCR       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR027124   Swc5/CFDP2       
IPR000637   HMGI/Y_DNA-bd_CS       
SUPFAM
SSF103473   SSF103473        + More
SSF56219   SSF56219       
SSF50494   SSF50494       
SSF57424   SSF57424       
SSF63501   SSF63501       
Gene 3D
PDB
5HHL     E-value=5.57869e-08,     Score=137

Ontologies

Topology

Length:
442
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1109
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01375
outside
1  -  442
 
 

Population Genetic Test Statistics

Pi
176.047266
Theta
84.83829
Tajima's D
2.207326
CLR
0.558639
CSRT
0.910104494775261
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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