SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14856  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012192
Annotation
PREDICTED:_U4/U6.U5_small_nuclear_ribonucleoprotein_27_kDa_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.577
 

Sequence

CDS
ATGGGTAGGTCGCCTAGCCCTCGGCGGCGCGACGACAGACGCCGCGAAGACAGGCGAGAGAGGGAGAGACGGCGCCCTCGGACCAGATCTCGGTCCCGCTCCCTGGACCGGCGGAGACGCAGCCCCGACAGACGCAGGTCTCCGTCACCGCGCCGCCGCCGATCGAATTCGCCCTCGCCGATACCGAGCACCTCATTCGTGAGACAAAAGAAACCGATCGGAGAACGCCCCATTATAACACCGGCAGACTTAGAAGGAAAAACTCCGGAGGAACAGGAAATGTTAAAGGTTATGGGCTTTTGCGGTTTCGACACAACGAAAGGTAAGAAAGTCGATGGTAATGTTGAAGGGGACGTACATGTGGTATTGAAACGGAAATACAGACAGTACATGAACCGGAAGGGCGGATTCAACAGGCCACTAGACTTCGTAGCTTAA
Protein
MGRSPSPRRRDDRRREDRRERERRRPRTRSRSRSLDRRRRSPDRRRSPSPRRRRSNSPSPIPSTSFVRQKKPIGERPIITPADLEGKTPEEQEMLKVMGFCGFDTTKGKKVDGNVEGDVHVVLKRKYRQYMNRKGGFNRPLDFVA

Summary

Uniprot
ProteinModelPortal
PDB
6QX9     E-value=5.40914e-19,     Score=225

Ontologies

GO

Topology

Length:
145
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.28455
outside
1  -  145
 
 

Population Genetic Test Statistics

Pi
215.267491
Theta
33.191995
Tajima's D
0.515567
CLR
36.037794
CSRT
0.52022398880056
Interpretation
Uncertain
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