Gene

KWMTBOMO14854

Pre Gene Modal

BGIBMGA012156

Annotation

PREDICTED:_AT-rich_interactive_domain-containing_protein_5B-like_[Bombyx_mori]

Location

Bomo_Chr24(+):16419861-16440745      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.405

CDS

ATGGACAAACCTTTTTTTCGGTTGGTAGGATCGCCCTGCGGTCAACACGGGCAGTACACCTTCTACAAGGCCCTACGTCTGACCGGCTCCAAGGAGAAGATAATAGCTATAGGAGATTTCTTCTTCGTTCGAATATGGCAGGACTGCGAACTGGTCTCCATAGGTGAACTCCAATTGCTTTGGACCGACCGGGTCTCTGATCAGACCCTGGTCAGCCTCCGCCTGTACTTCCTGCCCGAGAACACGCCAGACGGAAGGAGTCTCCACGGAGAGAAACCGGCGAATCCAATTCGCGCCACTAAAGTCATTTATCAACTTATCTGTTATCTATCGCACACGGACGCACTACACACGTAA

Protein

MDKPFFRLVGSPCGQHGQYTFYKALRLTGSKEKIIAIGDFFFVRIWQDCELVSIGELQLLWTDRVSDQTLVSLRLYFLPENTPDGRSLHGEKPANPIRATKVIYQLICYLSHTDALHT

Uniprot

H9JRJ6   A0A0N1IPL5   A0A2H1VL43   A0A194Q2L7   A0A212EYQ6   A0A0L7KWH1   + More
A0A1W4X771   A0A1W4XHV0   A0A1W4XHM1   A0A0A9Y4V4   A0A1W4X7C7   A0A1B6LHB6   A0A139WMA4   A0A1B6IHT1   A0A1B6IYW7   A0A1B6JRH5   V5H5B8   A0A1B6FHB0   A0A1Y1L9X5   A0A224X7T3   A0A0K8TI64   A0A146M3W6   A0A146LLH1   A0A1B6CVU6   A0A164XMG5   A0A0K2U2V8   A0A0P5GR67   A0A0P5GNA8   A0A0P5YU01   A0A0P5PKP2   A0A0P5ED76   A0A0P5EBH5   A0A0P5PS62   A0A0P4Y343   A0A0P5XD12   A0A0P5FTU0   A0A0P5KLW4   A0A0P5SDI0   A0A0P5MLG8   A0A0P5ZMP8   A0A0P5VQW3   A0A0N8BXY7   A0A0P5E624   A0A0P5GTA4   A0A0P4ZF42   A0A0P5YUS2   A0A0P4XXE8   A0A0P5DYS1   A0A0P5X9R8   A0A0P6D341   A0A0P6D673   A0A0P5W026   A0A0P5UR63   A0A0P5AGE7   A0A0N8BDV2   A0A0P5ITA3   A0A0P5RX76   A0A0P5MVK7   A0A0P5MU14   A0A0P5K9N3   A0A0P5QYX5   A0A0P5J2L6   A0A0P5IY64   A0A0P6GCR4   A0A0P5CZP6   A0A0P5LRV1   A0A0P6H6X0   A0A0P6ARN0   A0A0P5SP64   A0A0P5P7L1   A0A0P5VQP8   A0A0P5A6J9   A0A0N8E7S8   A0A0P5YUC6   A0A0P5ZFV5   A0A0P5ZNR9   E9IHN7   A0A0P5AW01   A0A0P5ESI4   A0A0P6D868   A0A0P5BPX8   A0A0P6EKE2   A0A0P4WMN0   A0A0P5RRZ6   A0A0P5RZ86   A0A0P5Q049   A0A026W293   A0A2A3E4Y5   A0A195D5I3   F4WN29   A0A151IZ34   A0A0M9A2R3   E2A1A2   A0A195FY02   A0A0C9RMP8   A0A3L8DR45   A0A195BPJ4   A0A232F9Q2   A0A310ST72   A0A088ALY9  

Pubmed

19121390    26354079    22118469    26227816    25401762    18362917    + More
19820115    28004739    26823975    21282665    24508170    21719571    20798317    30249741    28648823   

EMBL

BABH01031804    KQ460240    KPJ16404.1    ODYU01003140    SOQ41521.1    KQ459580    + More
KPI99244.1    AGBW02011451    OWR46622.1    JTDY01005059    KOB67416.1    GBHO01016400    JAG27204.1    GEBQ01016949    JAT23028.1    KQ971314    KYB29023.1    GECU01021241    JAS86465.1    GECU01015562    JAS92144.1    GECU01005941    JAT01766.1    GALX01000473    JAB67993.1    GECZ01020204    JAS49565.1    GEZM01066419    JAV67897.1    GFTR01008020    JAW08406.1    GBRD01000519    JAG65302.1    GDHC01004161    JAQ14468.1    GDHC01010544    JAQ08085.1    GEDC01019688    JAS17610.1    LRGB01000964    KZS14384.1    HACA01015014    CDW32375.1    GDIQ01237935    JAK13790.1    GDIQ01237934    JAK13791.1    GDIP01053141    JAM50574.1    GDIQ01132528    JAL19198.1    GDIP01149824    JAJ73578.1    GDIP01143770    JAJ79632.1    GDIQ01125014    JAL26712.1    GDIP01235466    JAI87935.1    GDIP01199165    GDIP01073986    JAM29729.1    GDIQ01269712    GDIQ01250426    GDIQ01247178    GDIQ01209285    GDIQ01030656    JAK01299.1    GDIQ01187444    JAK64281.1    GDIQ01095072    JAL56654.1    GDIQ01250425    GDIQ01248883    GDIQ01247177    GDIQ01246173    GDIQ01216835    GDIQ01203885    GDIQ01177552    GDIQ01147767    GDIQ01101175    JAK74173.1    GDIP01045246    JAM58469.1    GDIP01096682    JAM07033.1    GDIQ01133963    JAL17763.1    GDIP01151071    JAJ72331.1    GDIQ01237933    JAK13792.1    GDIP01217664    JAJ05738.1    GDIP01053140    JAM50575.1    GDIP01235467    JAI87934.1    GDIP01149823    JAJ73579.1    GDIP01075275    JAM28440.1    GDIQ01085887    JAN08850.1    GDIQ01084333    JAN10404.1    GDIP01107273    JAL96441.1    GDIP01109526    JAL94188.1    GDIP01199216    GDIP01073987    JAJ24186.1    GDIQ01187443    JAK64282.1    GDIQ01209284    GDIQ01206931    GDIQ01203884    GDIQ01164553    GDIQ01035207    GDIQ01032051    JAK42441.1    GDIQ01095071    JAL56655.1    GDIQ01151205    JAL00521.1    GDIQ01151206    JAL00520.1    GDIQ01187442    JAK64283.1    GDIQ01271038    GDIQ01268484    GDIQ01265709    GDIQ01250424    GDIQ01247179    GDIQ01216834    GDIQ01209283    GDIQ01206930    GDIQ01203883    GDIQ01177551    GDIQ01147768    GDIQ01108273    GDIQ01101176    GDIQ01095070    GDIQ01068935    JAL43453.1    GDIQ01208187    GDIQ01205489    JAK46236.1    GDIQ01269711    GDIQ01208188    JAK43537.1    GDIQ01035206    JAN59531.1    GDIP01163216    JAJ60186.1    GDIQ01166153    JAK85572.1    GDIQ01033558    JAN61179.1    GDIP01025749    JAM77966.1    GDIQ01092982    JAL58744.1    GDIQ01132527    JAL19199.1    GDIP01096734    JAM06981.1    GDIP01203363    JAJ20039.1    GDIQ01053444    JAN41293.1    GDIP01054536    JAM49179.1    GDIP01045245    JAM58470.1    GDIP01054537    JAM49178.1    GL763289    EFZ19916.1    GDIP01197919    JAJ25483.1    GDIQ01270799    JAJ80925.1    GDIQ01081333    JAN13404.1    GDIP01181963    JAJ41439.1    GDIQ01075039    JAN19698.1    GDIP01253255    JAI70146.1    GDIQ01096879    JAL54847.1    GDIQ01095073    JAL56653.1    GDIQ01131117    JAL20609.1    KK107538    EZA49154.1    KZ288370    PBC26748.1    KQ976870    KYN07699.1    GL888233    EGI64397.1    KQ980725    KYN14013.1    KQ435753    KOX76095.1    GL435730    EFN72796.1    KQ981169    KYN45316.1    GBYB01014702    JAG84469.1    QOIP01000005    RLU22663.1    KQ976433    KYM87374.1    NNAY01000611    OXU27405.1    KQ760561    OAD59789.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000037510    UP000192223    + More
UP000007266    UP000076858    UP000053097    UP000242457    UP000078542    UP000007755    UP000078492    UP000053105    UP000000311    UP000078541    UP000279307    UP000078540    UP000215335    UP000005203   

PRIDE

H9JRJ6   

Pfam

PF01388   ARID

Interpro

IPR036431   ARID_dom_sf        + More
IPR001606   ARID_dom       
IPR001025   BAH_dom       

SUPFAM

SSF46774   SSF46774       

Gene 3D

1.10.150.60    

ProteinModelPortal

H9JRJ6   A0A0N1IPL5   A0A2H1VL43   A0A194Q2L7   A0A212EYQ6   A0A0L7KWH1   + More
A0A1W4X771   A0A1W4XHV0   A0A1W4XHM1   A0A0A9Y4V4   A0A1W4X7C7   A0A1B6LHB6   A0A139WMA4   A0A1B6IHT1   A0A1B6IYW7   A0A1B6JRH5   V5H5B8   A0A1B6FHB0   A0A1Y1L9X5   A0A224X7T3   A0A0K8TI64   A0A146M3W6   A0A146LLH1   A0A1B6CVU6   A0A164XMG5   A0A0K2U2V8   A0A0P5GR67   A0A0P5GNA8   A0A0P5YU01   A0A0P5PKP2   A0A0P5ED76   A0A0P5EBH5   A0A0P5PS62   A0A0P4Y343   A0A0P5XD12   A0A0P5FTU0   A0A0P5KLW4   A0A0P5SDI0   A0A0P5MLG8   A0A0P5ZMP8   A0A0P5VQW3   A0A0N8BXY7   A0A0P5E624   A0A0P5GTA4   A0A0P4ZF42   A0A0P5YUS2   A0A0P4XXE8   A0A0P5DYS1   A0A0P5X9R8   A0A0P6D341   A0A0P6D673   A0A0P5W026   A0A0P5UR63   A0A0P5AGE7   A0A0N8BDV2   A0A0P5ITA3   A0A0P5RX76   A0A0P5MVK7   A0A0P5MU14   A0A0P5K9N3   A0A0P5QYX5   A0A0P5J2L6   A0A0P5IY64   A0A0P6GCR4   A0A0P5CZP6   A0A0P5LRV1   A0A0P6H6X0   A0A0P6ARN0   A0A0P5SP64   A0A0P5P7L1   A0A0P5VQP8   A0A0P5A6J9   A0A0N8E7S8   A0A0P5YUC6   A0A0P5ZFV5   A0A0P5ZNR9   E9IHN7   A0A0P5AW01   A0A0P5ESI4   A0A0P6D868   A0A0P5BPX8   A0A0P6EKE2   A0A0P4WMN0   A0A0P5RRZ6   A0A0P5RZ86   A0A0P5Q049   A0A026W293   A0A2A3E4Y5   A0A195D5I3   F4WN29   A0A151IZ34   A0A0M9A2R3   E2A1A2   A0A195FY02   A0A0C9RMP8   A0A3L8DR45   A0A195BPJ4   A0A232F9Q2   A0A310ST72   A0A088ALY9  

KEGG

101740963    no KO assigned | (RefSeq) AT-rich interactive domain-containing protein 5B-like

GO

GO:0005634   GO:0003677   GO:0006355   GO:0016021   GO:0044212   GO:0006357   GO:0008233   GO:0003682  

Subcellular location

Nucleus  

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00317

Exp number, first 60 AAs:

0.0023

Total prob of N-in:

0.06132

outside

1  -  118

 

 

Pi

194.940828

Theta

156.637802

Tajima's D

0.091491

CLR

110.576049

CSRT

0.393630318484076

Interpretation

Uncertain