Silkworm Genome Informatics Database

Gene

KWMTBOMO14853

Pre Gene Modal

BGIBMGA012155

Annotation

PREDICTED:_uncharacterized_protein_LOC106138951_[Amyelois_transitella]

Location

Bomo_Chr24(+):16366011-16375421 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.375

CDS

ATGTTCTGCATCCAAGAGTCAGATCACAAAGATCCGTTCTCATCGGACCAAGATCCTCTGGAAGGCCCTTCGGAATCCAGCGACGATGAACCGGCCTCCAAACGCCTGAAAACCTATGATTCTCCATCTCTGAACCTCAAAGTGTATCAGATACCTGCCTACAACGCTTCAAAGTCACTATCGATATATCCAACGGCACCGCAGTTACCTATATTCGTCAATAATCCTTTAAATCTGGCCAACCCACTGGCTCTGAACACAACGGTTCAGGTCGATAATGTAGTCAAGAATTTACATAGTCGATACTCCCTGCCTGCAAAATTGACCATCACACCGGTCCCCCAAAGCCCTAAATGTGAGAACGGTCAAATCGTGAGGTATAAGAAGAACGGAGAGGTGGCTAAGAAGAGGGGACCTCCGAAGGGCTACAAGAGGAAACCGAAGGTAGACCTCTCGCAGAGCTTGAACAATGGGGCGCTACAGGCTCAAAATGTGATATTGACAAGTTTATTGGCAGCCAACAATACGACGTTAAGTTTGTCGCTTCCGCCTCCGCCTGTGGAGGAGCCCGTCAGAGTCGTCTCGGAGCCGGTTAAGGTACCTGAAGGAGTCGAACTGGTGGAACTACTCCTGGACCCTCAAGACTGGTTTCCGGACGAGCCCTACAAGATGGTGTTCAGCAGGAAAAAGAACCCTAAATGGAAGAACTTTCCTTACATATGCGAGTTTTGTTTTAAGGGGTACCGCGTGGCGTCGACCCTGGTGTCGCACTGCGGCTCGCGGCACGGCGCCTGCCCGCGCGCGCTGTGCGTGCCGTGCCCGTGCTGCCCGCACGTGTCCCTCCGCCGGAAGCAGCACAAGAAACATCTGGAGACGCACCACGGAAGGAAGCATAGGATATTTTGCATGTACTGCCTCCCGCCAGCGGATCCCGGCGAGCCTCACGTCAAGGAGAACACGAAGTATCCATTCGACACCCACCCTCAATACTGGTACGCCTCCGAGGAGTCGTTGAGGCTGCACAAGAAGCGGAAACATCCGTACGCGGCGATGTTCAACTACAACTGGTACTGTACGTGGGGCGAGAACGCGCCGAACAGCTAA

Protein

MFCIQESDHKDPFSSDQDPLEGPSESSDDEPASKRLKTYDSPSLNLKVYQIPAYNASKSLSIYPTAPQLPIFVNNPLNLANPLALNTTVQVDNVVKNLHSRYSLPAKLTITPVPQSPKCENGQIVRYKKNGEVAKKRGPPKGYKRKPKVDLSQSLNNGALQAQNVILTSLLAANNTTLSLSLPPPPVEEPVRVVSEPVKVPEGVELVELLLDPQDWFPDEPYKMVFSRKKNPKWKNFPYICEFCFKGYRVASTLVSHCGSRHGACPRALCVPCPCCPHVSLRRKQHKKHLETHHGRKHRIFCMYCLPPADPGEPHVKENTKYPFDTHPQYWYASEESLRLHKKRKHPYAAMFNYNWYCTWGENAPNS

Uniprot

A0A3S2LX84 A0A194Q1Q6 A0A212F102 A0A0N1I623 A0A2A4JZL5 A0A2H1WBM7 + More

Pubmed

26354079 22118469

EMBL

RSAL01000140 RVE46082.1 KQ459580 KPI99258.1 AGBW02010985 OWR47425.1 + More
KQ460911 KPJ10820.1 NWSH01000365 PCG76953.1 ODYU01007580 SOQ50468.1

Proteomes

UP000283053 UP000053268 UP000007151 UP000053240 UP000218220

Pfam

PF07177 Neuralized

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR006573   NHR_dom
IPR037962   Neuralized

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A3S2LX84 A0A194Q1Q6 A0A212F102 A0A0N1I623 A0A2A4JZL5 A0A2H1WBM7 + More

KEGG

101741104 no KO assigned | (RefSeq) uncharacterized LOC101741104

GO

GO:0003676 GO:0046872 GO:0015078 GO:0015986 GO:0006508 GO:0016701 GO:0006355 GO:0003824 GO:0008152 GO:0016491 GO:0015930

PANTHER

PTHR12429

Length:

367

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00514999999999998

Exp number, first 60 AAs:

0.00058

Total prob of N-in:

0.01577

outside

1 - 367

Pi

224.673994

Theta

146.822062

Tajima's D

1.932823

CLR

0.028016

CSRT

0.867806609669517

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics