Gene

KWMTBOMO14845  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012151

Annotation

ARP1_actin-related_protein_1-like_protein_A_[Bombyx_mori]

Location

Bomo_Chr24(+):16237551-16245822      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.64

CDS

ATGGAGTTGAGTGATGTTATAGTGAATCAGCCCGTCGTAATAGACAACGGCTCCGGCGTAATAAAGGCGGGCTTCGCTGGTGATCAGATACCGAAATGTCGTTTCCCGAACTATATTGGTCGTCCGAAGCACACAAGAGTGATGGCAGGAGCGCTAGAAGGCGAGATCTTCGTTGGTCCTCGTGCAGAAGAGCATCGCGGCCTTCTCAGCATCAAATACCCAATGGAACACGGAATAGTTACAGACTGGAACGACATGGAAAAGATTTGGAATTATATTTACAGTAAGGACCAGCTATCTACTTTCTCAGAAGAACACCCAGTGCTGTTGACAGAAGCACCTCTGAACCCTCGCAGGAATAGAGAAAAGTCCGCCGAAATATTCTTTGAGACATTCAATGTACCGGCATTATTTCTTTCAATGCAGGCCGTTCTCAGTTTGTATGCAACAGGTCGTACCACGGGTGCTGTACTGGACTCCGGCGATGGAGTGACGCACGCCGTCCCCATATACGAGGGGTTCGCGATGCCGCACAGCATCATGAGAGTCGACGTGGCCGGGCGTGACGTCACCAAGTACCTTAGACTTCTACTCCGCAAAGAGGGAGTGAACCTCAGGACGTCCGCCGAGCTGGAGATCGTCAAGTCTATCAAGGAGCGGGCGTGCTACCTGTCTCCGAACCCTCTGAAGGAAGAGACCTTGGAGAATGAAAGGGCCCAATACGTTCTCCCTGATGGAACACAACTTGAGATTGGCCCGGCCCGGTTCCGAGCTCCCGAAGTGCTCTTCAGACCGGACCTGATCGGTGAGGAGTGCGAAGGTCTTCACGAGGTGTTAATGTTTTCAATCCACAAGTCGGACATGGACCTAAGGAAGGTCCTCTACCAGAACATAGTCCTCAGCGGGGGCTCCACGCTGTTCCGGGGGTTCGGGGACAGGCTCCTGCACGAGATCCGGAGACTAGCGCCTAAGGATATGAAGATCAGGATCTCGGCCCCCCAGGAGCGCCTGTACTCCACGTGGATCGGAGGCTCGATCCTCGCGTCTCTGGACACTTTCCGCAAGATGTGGGTCTCCAAGAGAGAGTATGACGAGGAGGGCCACAGGGCCGTCCACAGAAAGACGTTCTAG

Protein

MELSDVIVNQPVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACYLSPNPLKEETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEGLHEVLMFSIHKSDMDLRKVLYQNIVLSGGSTLFRGFGDRLLHEIRRLAPKDMKIRISAPQERLYSTWIGGSILASLDTFRKMWVSKREYDEEGHRAVHRKTF

Similarity

Belongs to the actin family.

Uniprot

Q1HQC8   A0A1E1WRB9   A0A2W1BIG3   A0A194Q1Q1   A0A212F2S0   A0A067QRR9   + More
A0A2J7RH58   A0A2P8XLQ5   A0A2A3EF48   A0A0C9QZ95   E2A6V0   A0A158NKI3   A0A3L8DSF3   A0A088ADG4   C3Y5C1   E2C314   A0A1B6GR95   C1BUD7   A0A1B6E5Q5   A0A0K8TTV7   A0A1W4X687   A0A2R5LKE3   V5G2Y5   A0A0A9W7L5   T1ISG9   A0A1B0EZF3   E0VYK5   A0A293LWR2   A0A1L8E4V0   A0A1S3DBU9   A0A0P4VSM7   A0A069DYT4   A0A0V0G8M1   A0A023FJF1   A0A023FW29   M7BLL8   A0A023GJC8   G3MLF0   B7QDE8   A0A151NUW4   Q6DJH8   A9UMK9   A0A224YVH0   A0A131YWK4   L7MB37   A0A3L8SHE4   U3K221   V9KE22   A0A2P6KJ71   A0A3M6V2U3   A0A131XKV4   A0A226MSL1   A0A226PSC1   Q5ZM58   A0A0Q3T9Y1   L5K097   H3AQ73   A0A2B4SVY6   A0A1D2NMV2   A0A091VRB5   A0A0M8ZZJ5   A0A1Y1N7T7   W5N4M8   K1Q811   A0A1W7RJ85   H3B8R3   J3SE10   T1DMC6   A0A2D4HBT3   H0WTX1   A0A1Z5L798   A0A2K6F0Y1   A0A3B0K413   Q299V2   B4G5S4   A0A1V4KIK2   A0A2I0MEQ5   A0A1S3F9Q5   A0A1A6GV67   I3MMX5   A0A1U8BI71   H0VSV0   A0A091DPY8   G3HXW9   G5CAH6   A0A2K6BCH4   A0A2K6LIG1   A0A384DNN8   G1SPM5   G1P6V4   G7PDV1   G3QJD6   G1MHH5   G1RYT8   L8J3G7   A0A341AL98   A0A2K5ZZV9   A0A0D9QZD8   G3SVH1   A0A2Y9D8T9  

Pubmed

19121390    28756777    26354079    22118469    24845553    29403074    + More
20798317    21347285    30249741    18563158    26369729    25401762    20566863    27129103    26334808    23624526    22216098    22293439    27762356    20431018    28797301    26830274    25576852    30282656    24402279    30382153    28049606    24621616    15592404    15642098    23258410    9215903    27289101    28004739    22992520    26358130    23025625    23758969    25727380    28528879    15632085    17994087    23371554    26319212    21993624    21804562    23929341    21993625    24813606    22002653    22398555    20010809    22751099   

EMBL

BABH01031823    DQ443124    ABF51213.1    GDQN01001526    JAT89528.1    KZ150102    + More
PZC73495.1    KQ459580    KPI99253.1    AGBW02010693    OWR48022.1    KK853097    KDR11422.1    NEVH01003746    PNF40171.1    PYGN01001763    PSN32946.1    KZ288271    PBC29829.1    GBYB01006027    JAG75794.1    GL437203    EFN70816.1    ADTU01002067    QOIP01000005    RLU23103.1    GG666487    EEN64168.1    GL452257    EFN77671.1    GECZ01004849    JAS64920.1    BT078216    HACA01013719    ACO12640.1    CDW31080.1    GEDC01004028    JAS33270.1    GDAI01000032    JAI17571.1    GGLE01005856    MBY09982.1    GALX01004086    JAB64380.1    GBHO01039172    GBHO01039169    GBHO01039168    GBHO01039166    JAG04432.1    JAG04435.1    JAG04436.1    JAG04438.1    JH431432    AJWK01022428    DS235845    EEB18461.1    GFWV01008434    MAA33163.1    GFDF01000316    JAV13768.1    GDKW01001009    JAI55586.1    GBGD01001835    JAC87054.1    GECL01001750    JAP04374.1    GBBK01002720    JAC21762.1    GBBL01001294    JAC26026.1    KB559124    EMP29092.1    GBBM01001404    JAC34014.1    JO842701    AEO34318.1    ABJB010284674    ABJB010736588    ABJB011057356    DS913072    EEC16870.1    AKHW03001922    KYO40646.1    BC075201    CM004478    AAH75201.1    OCT71662.1    AAMC01084081    BC157698    AAI57699.1    GFPF01006686    MAA17832.1    GEDV01005220    JAP83337.1    GACK01004670    JAA60364.1    QUSF01000019    RLW02164.1    AGTO01020393    JW863474    AFO95991.1    MWRG01010659    PRD26386.1    RCHS01000204    RMX60273.1    GEFH01000447    JAP68134.1    MCFN01000481    OXB58277.1    AWGT02000026    OXB82400.1    AADN05000306    AJ719526    CAG31185.1    LMAW01002767    KQK77342.1    KB031059    ELK05000.1    AFYH01182352    AFYH01182353    AFYH01182354    AFYH01182355    AFYH01182356    AFYH01182357    AFYH01182358    AFYH01182359    AFYH01182360    AFYH01182361    LSMT01000021    PFX32585.1    LJIJ01000002    ODN06594.1    KL409842    KFQ92213.1    KQ435812    KOX72749.1    GEZM01015377    JAV91697.1    AHAT01023142    AHAT01023143    AHAT01023144    JH817876    EKC30038.1    GDAY02000200    JAV51213.1    AFYH01078463    AFYH01078464    AFYH01078465    AFYH01078466    AFYH01078467    AFYH01078468    AFYH01078469    AFYH01078470    JU173930    GBEX01000276    AFJ49456.1    JAI14284.1    GAAZ01000213    GBKC01000290    GBKD01000185    JAA97730.1    JAG45780.1    JAG47433.1    IACK01019560    IACK01019561    LAA69428.1    AAQR03152039    GFJQ02003795    JAW03175.1    OUUW01000005    SPP80376.1    CM000070    EAL27599.1    CH479179    EDW24940.1    LSYS01003057    OPJ84274.1    AKCR02000017    PKK28142.1    LZPO01068676    OBS69525.1    AGTP01072689    AAKN02016521    KN122182    KFO32320.1    JH000895    KE672975    EGV98261.1    ERE78843.1    JH174169    GEBF01000039    EHB18537.1    JAO03594.1    AAGW02060858    AAPE02031085    CM001284    EHH64983.1    CABD030075840    CABD030075841    CABD030075842    ACTA01105810    ADFV01163572    ADFV01163573    ADFV01163574    ADFV01163575    JH880389    ELR61972.1    AQIB01042558   

Proteomes

UP000005204    UP000053268    UP000007151    UP000027135    UP000235965    UP000245037    + More
UP000242457    UP000000311    UP000005205    UP000279307    UP000005203    UP000001554    UP000008237    UP000192223    UP000092461    UP000009046    UP000079169    UP000031443    UP000001555    UP000050525    UP000186698    UP000008143    UP000276834    UP000016665    UP000275408    UP000198323    UP000198419    UP000000539    UP000051836    UP000010552    UP000008672    UP000225706    UP000094527    UP000053283    UP000053105    UP000018468    UP000005408    UP000005225    UP000233160    UP000268350    UP000001819    UP000008744    UP000190648    UP000053872    UP000081671    UP000092124    UP000005215    UP000189706    UP000005447    UP000028990    UP000001075    UP000030759    UP000006813    UP000233120    UP000233180    UP000261680    UP000291021    UP000001811    UP000001074    UP000009130    UP000001519    UP000008912    UP000001073    UP000252040    UP000233140    UP000029965    UP000007646    UP000248480   

PRIDE

Q1HQC8    G3MLF0    B7QDE8    L7MB37    G3HXW9   

Pfam

PF00022   Actin        + More
PF18122   APC1_C
PF00025   Arf

Interpro

IPR020902   Actin/actin-like_CS        + More
IPR004001   Actin_CS       
IPR004000   Actin       
IPR024990   Apc1       
IPR041221   APC1_C       
IPR027417   P-loop_NTPase       
IPR005225   Small_GTP-bd_dom       
IPR006689   Small_GTPase_ARF/SAR       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

Q1HQC8   A0A1E1WRB9   A0A2W1BIG3   A0A194Q1Q1   A0A212F2S0   A0A067QRR9   + More
A0A2J7RH58   A0A2P8XLQ5   A0A2A3EF48   A0A0C9QZ95   E2A6V0   A0A158NKI3   A0A3L8DSF3   A0A088ADG4   C3Y5C1   E2C314   A0A1B6GR95   C1BUD7   A0A1B6E5Q5   A0A0K8TTV7   A0A1W4X687   A0A2R5LKE3   V5G2Y5   A0A0A9W7L5   T1ISG9   A0A1B0EZF3   E0VYK5   A0A293LWR2   A0A1L8E4V0   A0A1S3DBU9   A0A0P4VSM7   A0A069DYT4   A0A0V0G8M1   A0A023FJF1   A0A023FW29   M7BLL8   A0A023GJC8   G3MLF0   B7QDE8   A0A151NUW4   Q6DJH8   A9UMK9   A0A224YVH0   A0A131YWK4   L7MB37   A0A3L8SHE4   U3K221   V9KE22   A0A2P6KJ71   A0A3M6V2U3   A0A131XKV4   A0A226MSL1   A0A226PSC1   Q5ZM58   A0A0Q3T9Y1   L5K097   H3AQ73   A0A2B4SVY6   A0A1D2NMV2   A0A091VRB5   A0A0M8ZZJ5   A0A1Y1N7T7   W5N4M8   K1Q811   A0A1W7RJ85   H3B8R3   J3SE10   T1DMC6   A0A2D4HBT3   H0WTX1   A0A1Z5L798   A0A2K6F0Y1   A0A3B0K413   Q299V2   B4G5S4   A0A1V4KIK2   A0A2I0MEQ5   A0A1S3F9Q5   A0A1A6GV67   I3MMX5   A0A1U8BI71   H0VSV0   A0A091DPY8   G3HXW9   G5CAH6   A0A2K6BCH4   A0A2K6LIG1   A0A384DNN8   G1SPM5   G1P6V4   G7PDV1   G3QJD6   G1MHH5   G1RYT8   L8J3G7   A0A341AL98   A0A2K5ZZV9   A0A0D9QZD8   G3SVH1   A0A2Y9D8T9  

PDB

6F3A     E-value=0,     Score=1719

KEGG

732868    K16575 centractin | (RefSeq) ARP1 actin-related protein 1-like protein A

GO

GO:0005869   GO:0005737   GO:0005524   GO:0005680   GO:0005813   GO:0000132   GO:0099738   GO:0030473   GO:0005856   GO:0005525   GO:0019896   GO:0008089   GO:0008090   GO:1904115  

PANTHER

PTHR11937   PTHR12827  

Subcellular location

  

Length:

376

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.13915

Exp number, first 60 AAs:

0.0028

Total prob of N-in:

0.04820

outside

1  -  376

 

 

Pi

224.268411

Theta

179.131809

Tajima's D

0.968878

CLR

0.604438

CSRT

0.647817609119544

Interpretation

Uncertain