Gene

KWMTBOMO14843  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012195

Annotation

PREDICTED:_double-stranded_RNA-specific_editase_Adar_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr24(-):16203322-16227130      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.932 Nuclear   Reliability : 1.809

CDS

ATGAATATTACTTTTCAGACTTCGGTGTGCGATATAACGTCGACATCGGACTTTGTGAGTCCTCGAAGTAAGATGATCAAGCAGAAACGGAAACGCGAGTTTCCGTGTACAGATGTGCAACCTGCAATCAAGAGGCCCGCGCCATCGATACGTGTCGGCTCCGGATTCAAATGGAACCTACAGGCGTTGGCGCATGCGGCCGACGCGGTGCAGTCTGGCGGAAAATCACCTGTCTCCGCCCTCAACGAGCTGGGCGTTCGCGTCACCTACACCGTGCTGAGCCAGGGCGGCCCAGCGCATTGTCCCAGCTTCACCGTGGCAGTCAATCTTACCAAGAAGAAAAATAAGAGAACAATAAGTAAGATCTGTAAGGATTTAAATAAAAAGAATCCAGTGATGATATTGAATGAAACGCCACACGGATTTCGATGCAAGGAAATAGGAACCTTCAGTACTCCCAATAAGACGGTCTTTGGAGTTGCTATGACTGTCGCCGATATGACCTTTGAAGGTTGGGGTCACAGTAAGCGTGAGGCACGCGCGTCCGCAGCCAGGGTTTGTCTCGCGGCTCTGCTCGCCCGAGCTGGCCACGTGCTGCCAGACCAGACCCGCGCCAAGGACTTCACTGTTGACGACACAACACCTTATCCCGTCTCCGAATTCCAATGTCTCGAGAGCAAATCGAAGATTGAAGAGCAGACGAAGCAAAACGCTGTCACGGAAACAGCCCAGAGTCAGATTGAGAGGAATCTGCCCACGTCGTCGCTGTTCGGCGCCACCGCCCCCACCCCGGCCTCCAAGAGCCCCATCAATGTCCTCTACGAGAACCACCCGGGGCTGCTGTTCATCTGTACCTATGGGGACGGAACACCCTTGGATTCTGCTCAGGTTCCGCTACAGCTGGCCCACAGCATGAGGTTCAAGGTTGTCTGCCAGATCAAGGAACAGAAGTTCGAGGGTTATGGTTCGAGCAAGAAGCTGGCGAAGTTGGCGGCGGCCCGCAGCGCGCTGGCCGTGCTGGAGGAGGGCCGCGCCGACATCGCGGACAGCCTGCTGCCCTCCGGCTACCTCTCGCAGACCCTCGCCGACCACATAGCCAATCTCGTGAACAGCAAATTCAGTGAGATGATGAAGAATGACGTCATACATTCGAAGAGGAAGGTCCTGGCCGGGATCGTGATGACGACCGACAGCAAGGTGGACGGTGCCAAGGTGATAGCGGTGGCGACGGGCACCAAGTGCGTCTCCGGCGAGCACATGTCGGTGCGCGGCCGGGCCGTCAACGACTGCCACGCGGAGGTGGCGGCCCGGCGCTGCCTCCAACGCCACCTGTACACCCAGCTGCTGCTTTACGCCTCACAAAAAGACCCCCGCAAGCCGATCCCCGAGGCGGACATTGAGCCCGCGGAGGGGGGCGGCTACCGACTCCGCCCCGACCGGCAGCTACACATGTACGTGAGCACCGCGCCCTGCGGGGACGGGCGGATATTCAGCCCGCACGAGCAGCTACAGCACGAGCCGGACCGACATCCCAACAGGTTGGCCCGGGGACAGCTCCGCACGAAGATAGAGTCGGGCGAGGGTACGATCCCGGTGAAGAACTGCAACAGCTTGCTGCAGACCTGGGACGGTGTTATGCAGGGCGAGCGCCTCCTGACGATGTCGTGTTCTGATAAAGTGGCCCGCTGGTGCGTCCTCGGCCTGCAGGGCTCGCTGATGTCCACGCTGCTGGCGCCCGTGTACCCGACCTCGATAGTGCTGGGCTCGCTGCTGCACCCGCACCACTTGTACAGACCGAAAAATTTCTTGAAGAATCCATTCAACGCTGAACCTTTGCTCGCCTCTATATTATATGAGAAAGGCGTGCCAAACAACGCTGGTTTCGCGCCTATATAA

Protein

MNITFQTSVCDITSTSDFVSPRSKMIKQKRKREFPCTDVQPAIKRPAPSIRVGSGFKWNLQALAHAADAVQSGGKSPVSALNELGVRVTYTVLSQGGPAHCPSFTVAVNLTKKKNKRTISKICKDLNKKNPVMILNETPHGFRCKEIGTFSTPNKTVFGVAMTVADMTFEGWGHSKREARASAARVCLAALLARAGHVLPDQTRAKDFTVDDTTPYPVSEFQCLESKSKIEEQTKQNAVTETAQSQIERNLPTSSLFGATAPTPASKSPINVLYENHPGLLFICTYGDGTPLDSAQVPLQLAHSMRFKVVCQIKEQKFEGYGSSKKLAKLAAARSALAVLEEGRADIADSLLPSGYLSQTLADHIANLVNSKFSEMMKNDVIHSKRKVLAGIVMTTDSKVDGAKVIAVATGTKCVSGEHMSVRGRAVNDCHAEVAARRCLQRHLYTQLLLYASQKDPRKPIPEADIEPAEGGGYRLRPDRQLHMYVSTAPCGDGRIFSPHEQLQHEPDRHPNRLARGQLRTKIESGEGTIPVKNCNSLLQTWDGVMQGERLLTMSCSDKVARWCVLGLQGSLMSTLLAPVYPTSIVLGSLLHPHHLYRPKNFLKNPFNAEPLLASILYEKGVPNNAGFAPI

Uniprot

H9JRN5   A0A212F4F2   A0A194Q779   A0A091M2P3   A0A1D5PS41   K7FFP1   + More
K7FFR2   A0A2K6SLH3   A0A2K6SLK0   A0A093HJK0   A0A091KMX0   V8PFX0   Q90VV7   Q90VZ5   A0A091HNZ3   A0A093DEP7   A0A091J7G2   A0A3Q0GE77   A0A1U7RXQ4   A0A093Q1Y1   A0A093FCI1   A0A2I3M1R9   A0A091V4A8   A0A093HW59   A0A099ZKD0   A0A151N9R2   A0A2K5CS14   A0A3B4Y9H6   A0A3B4U6H5   A0A2K5R875   A0A2K5CS27   A0A3Q0GEE6   A0A0A0AXY6   A0A091T6F8   U3DFM0   A0A087R9G8   A0A2K5R884   A0A093NXM0   A0A091Q284   U3J7Q1   A0A0S7L0C3   A0A1L8EWQ6   A0A091H2Q2   Q5U4T4   A0A3B4Y9J8   A0A2K5UG64   F7IS82   A0A096NIB1   A0A2Y9SBA4   A0A093GKP7   H0ZLN7   G1KJC4   A0A0S7L091   A0A2I3GLS2   F7FMP3   A0A3Q2Y3Q7   A4IIV9   A0A091V5K9   L5JX02   A0A218UNP1   A0A3P8WSX3   A0A3L8S3D5   S7Q3W8   A0A2K6BU96   A0A2K5UFW6   A0A0D9R561   A0A2K5LEP2   F7G963   A0A2R8ZY51   H2QZM5   A0A2K6BU98   A0A2K5UG24   A0A2I3LDH1   A0A2K5LEX0   A0A1D5QUE4   A0A2R8ZTH9   A0A2I3T8K9   A0A2I2V5I5   A0A2K6RDI1   A0A2K5HB13   G1QQ87   H2SWG8   A0A2K5HAZ8   A0A2J8RSE4   A0A2K6RDM5   A0A2J8RSD5   A0A1A8S8J9   A0A2K6L3P3   A0A091F477   A0A3Q4AR44   H0W0L7   A0A2K6RDG1   A0A3P8WQX3  

Pubmed

19121390    22118469    26354079    15592404    17381049    24297900    + More
15642098    22293439    25243066    23749191    27762356    20360741    18464734    20431018    23258410    24487278    30282656    17431167    22722832    16136131    16136134    17975172    25362486    21551351    21993624   

EMBL

BABH01031824    BABH01031825    BABH01031826    BABH01031827    BABH01031828    AGBW02010384    + More
OWR48602.1    KQ459580    KPI99250.1    KK520006    KFP66068.1    AADN05000347    AGCU01020983    AGCU01020984    AGCU01020985    KL206176    KFV79635.1    KK534807    KFP29099.1    AZIM01000162    ETE72898.1    AF403117    AF403121    AAL01312.1    AF403115    AF403119    AJ719343    AAL01310.1    CAG31002.1    KL217603    KFO96884.1    KN125754    KFU84322.1    KK501508    KFP15670.1    KL670089    KFW78257.1    KK630484    KFV55417.1    AHZZ02021396    AHZZ02021397    KL410606    KFQ97843.1    KK398741    KFV58723.1    KL895122    KGL82296.1    AKHW03003682    KYO33572.1    KL873342    KGL98378.1    KK438364    KFQ69425.1    GAMS01000760    GAMR01004025    GAMQ01004428    JAB22376.1    JAB29907.1    JAB37423.1    KL226224    KFM10122.1    KL224844    KFW64847.1    KK683546    KFQ13626.1    ADON01053263    GBYX01190734    JAO82930.1    CM004482    OCT63787.1    KL448116    KFO80602.1    BC084960    AAH84960.1    AQIA01044234    AQIA01044235    AQIA01044236    AQIA01044237    AQIA01044238    AQIA01044239    AQIA01044240    KL215909    KFV67349.1    ABQF01009901    ABQF01009902    GBYX01190737    JAO82928.1    ADFV01100849    ADFV01100850    ADFV01100851    ADFV01100852    ADFV01100853    AAMC01059311    AAMC01059312    AAMC01059313    AAMC01059314    AAMC01059315    BC136174    AAI36175.1    KK733726    KFQ98318.1    KB031079    ELK03587.1    MUZQ01000222    OWK54982.1    QUSF01000070    RLV96459.1    KE164160    EPQ15582.1    AQIB01146488    AQIB01146489    JSUE03026975    JSUE03026976    AJFE02084028    AJFE02084029    AACZ04066235    GABC01006496    GABF01000977    GABD01004812    GABE01008281    NBAG03000265    JAA04842.1    JAA21168.1    JAA28288.1    JAA36458.1    PNI55893.1    PNI55896.1    PNI55899.1    AANG04004523    NDHI03003657    PNJ11446.1    ABGA01147248    ABGA01147249    ABGA01147250    ABGA01147251    ABGA01147252    PNJ11440.1    PNJ11444.1    HAEH01022424    SBS13938.1    KK719543    KFO64056.1    AAKN02049546    AAKN02049547   

Proteomes

UP000005204    UP000007151    UP000053268    UP000000539    UP000007267    UP000233220    + More
UP000053584    UP000054308    UP000053119    UP000189705    UP000053258    UP000028761    UP000053283    UP000053641    UP000050525    UP000233020    UP000261360    UP000261420    UP000233040    UP000053858    UP000008225    UP000053286    UP000054081    UP000016666    UP000186698    UP000053760    UP000233100    UP000053875    UP000007754    UP000001646    UP000001073    UP000002279    UP000264820    UP000008143    UP000053605    UP000010552    UP000197619    UP000265120    UP000276834    UP000233120    UP000029965    UP000233060    UP000006718    UP000240080    UP000002277    UP000011712    UP000233200    UP000233080    UP000005226    UP000001595    UP000233180    UP000052976    UP000261620    UP000005447   

PRIDE

H9JRN5   

Pfam

PF02137   A_deamin        + More
PF00035   dsrm

Interpro

IPR014720   dsRBD_dom        + More
IPR002466   A_deamin       
IPR008996   IL1/FGF       

SUPFAM

SSF50353   SSF50353       

CDD

cd00048  DSRM

ProteinModelPortal

H9JRN5   A0A212F4F2   A0A194Q779   A0A091M2P3   A0A1D5PS41   K7FFP1   + More
K7FFR2   A0A2K6SLH3   A0A2K6SLK0   A0A093HJK0   A0A091KMX0   V8PFX0   Q90VV7   Q90VZ5   A0A091HNZ3   A0A093DEP7   A0A091J7G2   A0A3Q0GE77   A0A1U7RXQ4   A0A093Q1Y1   A0A093FCI1   A0A2I3M1R9   A0A091V4A8   A0A093HW59   A0A099ZKD0   A0A151N9R2   A0A2K5CS14   A0A3B4Y9H6   A0A3B4U6H5   A0A2K5R875   A0A2K5CS27   A0A3Q0GEE6   A0A0A0AXY6   A0A091T6F8   U3DFM0   A0A087R9G8   A0A2K5R884   A0A093NXM0   A0A091Q284   U3J7Q1   A0A0S7L0C3   A0A1L8EWQ6   A0A091H2Q2   Q5U4T4   A0A3B4Y9J8   A0A2K5UG64   F7IS82   A0A096NIB1   A0A2Y9SBA4   A0A093GKP7   H0ZLN7   G1KJC4   A0A0S7L091   A0A2I3GLS2   F7FMP3   A0A3Q2Y3Q7   A4IIV9   A0A091V5K9   L5JX02   A0A218UNP1   A0A3P8WSX3   A0A3L8S3D5   S7Q3W8   A0A2K6BU96   A0A2K5UFW6   A0A0D9R561   A0A2K5LEP2   F7G963   A0A2R8ZY51   H2QZM5   A0A2K6BU98   A0A2K5UG24   A0A2I3LDH1   A0A2K5LEX0   A0A1D5QUE4   A0A2R8ZTH9   A0A2I3T8K9   A0A2I2V5I5   A0A2K6RDI1   A0A2K5HB13   G1QQ87   H2SWG8   A0A2K5HAZ8   A0A2J8RSE4   A0A2K6RDM5   A0A2J8RSD5   A0A1A8S8J9   A0A2K6L3P3   A0A091F477   A0A3Q4AR44   H0W0L7   A0A2K6RDG1   A0A3P8WQX3  

PDB

5HP3     E-value=1.09035e-80,     Score=766

KEGG

100101209    K13194 double stranded RNA-specific editase B [EC:3.5.-.-] | (RefSeq) Adar; double-stranded RNA-spec

GO

GO:0004000   GO:0006396   GO:0003723   GO:0060384   GO:0006382   GO:0097049   GO:0005654   GO:0051726   GO:0061744   GO:0007274   GO:0045070   GO:0060415   GO:0008285   GO:0005829   GO:0021965   GO:0005730   GO:0021618   GO:0050884   GO:0030336   GO:0021610   GO:0035264   GO:0044387   GO:0003726   GO:0003725   GO:0005634   GO:0005737   GO:0008251   GO:0006508   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

631

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.19675

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00314

outside

1  -  631

 

 

Pi

167.210517

Theta

143.851008

Tajima's D

0.290684

CLR

12.572953

CSRT

0.448277586120694

Interpretation

Uncertain