Silkworm Genome Informatics Database

Gene

KWMTBOMO14841

Pre Gene Modal

BGIBMGA012196

Annotation

PREDICTED:_double-stranded_RNA-specific_editase_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(-):16183656-16187740 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.657 Nuclear Reliability : 2.143

CDS

ATGCCGCCACCCACCTCGAGACTCGAGTTAGCGATATGCGGGCGCATCGAAGCGTACATATCGTCGCTGCCGCCCCCTTACCATCTCCGGCGGCCCCTGCTGGCGAGAGCAGCAAGCACCGAAGCCAGGACGCCAACCAGAGCACCGTCGTTCAGCGTCTGCTGGGCGTGCACTAACACGGCCCCCGAAGTATTGAATGCCACAACCGGGAAGCTAGAGAATGGCCAGCCCTCACTACTGTGCAAACAGAGCATGTTCGCTAGATGGCAGTATTTGATCAAGAAACTACCCCCCTTACAGCAGTCACACCCGGACGGAACCAGCGTCTCATTGCCGAATCACTTGGATACTTTACTGTATAACGAAGCGAAACTACTCTCCCCAACGTATCAGGTAAATATATATATACTAAGCTGA

Protein

MPPPTSRLELAICGRIEAYISSLPPPYHLRRPLLARAASTEARTPTRAPSFSVCWACTNTAPEVLNATTGKLENGQPSLLCKQSMFARWQYLIKKLPPLQQSHPDGTSVSLPNHLDTLLYNEAKLLSPTYQVNIYILS

Uniprot

A0A212ELN0 A0A0N1IPU4 A0A194Q779 A0A2H1WLB4 W8GUJ9

Pubmed

22118469 26354079

EMBL

AGBW02014031 OWR42378.1 KQ460240 KPJ16393.1 KQ459580 KPI99250.1 + More
ODYU01009442 SOQ53873.1 KF956055 AHK23065.1

Proteomes

UP000007151 UP000053240 UP000053268

Pfam

PF02137 A_deamin + More
PF00035 dsrm

Interpro

IPR002466 A_deamin + More
IPR014720 dsRBD_dom

CDD

cd00048 DSRM

ProteinModelPortal

A0A212ELN0 A0A0N1IPU4 A0A194Q779 A0A2H1WLB4 W8GUJ9

PDB

6D06 E-value=3.61256e-13, Score=175

KEGG

100101209 K13194 double stranded RNA-specific editase B [EC:3.5.-.-] | (RefSeq) Adar; double-stranded RNA-spec

GO

GO:0003723 GO:0006396 GO:0004000 GO:0006508 GO:0016701 GO:0006355 GO:0003824 GO:0008152 GO:0016491 GO:0015930

Length:

138

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00141

Exp number, first 60 AAs:

0.00096

Total prob of N-in:

0.02996

outside

1 - 138

Pi

183.813351

Theta

48.468767

Tajima's D

1.603765

CLR

0

CSRT

0.815459227038648

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics