SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14836
Pre Gene Modal
BGIBMGA002352
Annotation
Protein_neuralized_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 2.589
 

Sequence

CDS
ATGATATGCAAAGAAGTGGAGCTAACTTCATTAGTCAAAGTACTTCAAGTACCGCAACTGAAGTACCAGGGTACTATGACATATGGAGAAGTGTTCGACGGGAACGCGCCCAGGACCTCGTGCACGGGCGGTGCTCCCAACAACCTCCCGCCGCTGACCTTCCACAGCGTCCACGGAGAGAACATCAGGGTGTCTAGGGACGGGCTCACCGCGAGACGGGTGGAGTCCTTCTGCAAGGGAGTCGCCTTCTCCGCGAGGCCTGTTAGAGTTAACGAGAAGGTGTGCATTCGCTTCGTAGAGATATCGAACAGCTGGAGCGGGGTGATCCGATTCGGCTTCACCTCGCACGATCCCGCGACCCTGGCCCACGCTCTGCCCAAATACGCGTGTCCCGACCTCACAAACAAACCGGGCAACTGGGCGAAAGCTTTAGGCGAAAGGTTCTGCGAAACGGACAACGTGCTACACTATTACGTGAATTCAACTGGCGATGTGCACTTTGGGGTTAACGGCGAAGACCGGGGGCTGTTCTTTTCCGGAGTGGACACCAGGAGTCCCCTGTGGGCGCTGGTGGACGTTTACGGAAACTGCACAGCCGTCCAGTTCGCCGATCCCAGGGTGCCGAGCCAGAGGCGGTCGAACCACAGCCCCGCAGACGAAGACAGACTGGTGTCCGGCGTCAGAGCGATGACCGTAGAGGACCTGCCTCCGCCCAGATACCAGAATCCACTGGCGCCGCTAAGCTTGCACAGAACGAAGGGCCGGAACGTTCAGGTGGTCAATGATAGGGGTATCGCCGCTAGAACCGAAGCCGAATTCTGTCAGGGATACGTGTTCACGGCGCGACCCATGCGTCCGGGGCAGACCATAGTCGTTCAGATCCTGGCCACGGAGACAGCGTACGCCGGCAGCCTGGCCATAGGACTCACGTCCTGCGATCCTGGGACTCTGAGGCCATGCGATTTGCCCGACGATGCGGAGTTGTTGTTAGATCGACCGGAATACTGGGTCGTGAGGAGGGACGCAGCTAACGGCCTCAGGAGAGGAGACGAGCTGGCCGTCACGCTGACCCTGGACGGAGAGGTGAGGGTCAGCAGGAACGGCTCGAATCCGGTGACGGTGATGCACGTCGACCATACGTTAAGGCTATGGGCTTTCGTGGATGTATACGGCGCGACACAGAAAGTCAGGATGCTGAGTACGCAGACGGTGGCGCAGACCCCTCCCCCGCAGCTGAGGGTGGTGGCGGGGGCGGGTAGCGCGGGGGGCGCGGTGCTCGTCGTCAGCCTGCCCCCGCAAGCCGGGGGACACCAGGTCAACCAACAGGGGCTCACTCTGGCCAGCGCACATTATATCGAGCCGATCCAGGCGACGTCTCAGATCTGTCTGACCGGCCTCCAGCCCCTCGCTCAGCCGTCCACCTGCGCCCAGCAGTTCCAGTCCCGTCCCCGGAACGAGGTTCAGTGCTCCTCCACCCAGAATAGCACCAACGAACAGGTCCAGATGCCGAACGGCCACCCGGAGCCTCTGAGGCTGGTGGAACGGCTGCCCTCGACCAGCCGCCAGCACCAGCCCGTGTACTCCGTCATCGGCGAGGGTCCGACGGGCGCCGAATGCTCTATATGCTACGAGAACCCAATAGATAGCGTGCTGTACATGTGCGGGCACATGTGTATGTGTTATCGGTGCGCGGTGCAGCAGTGGAGGGGGAAGGGCGGGGGTCAATGCCCCCTGTGCAGGGCGCAGATCAAAGACGTCATCCGCACGTACAAGTCGTGA
Protein
MICKEVELTSLVKVLQVPQLKYQGTMTYGEVFDGNAPRTSCTGGAPNNLPPLTFHSVHGENIRVSRDGLTARRVESFCKGVAFSARPVRVNEKVCIRFVEISNSWSGVIRFGFTSHDPATLAHALPKYACPDLTNKPGNWAKALGERFCETDNVLHYYVNSTGDVHFGVNGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQFADPRVPSQRRSNHSPADEDRLVSGVRAMTVEDLPPPRYQNPLAPLSLHRTKGRNVQVVNDRGIAARTEAEFCQGYVFTARPMRPGQTIVVQILATETAYAGSLAIGLTSCDPGTLRPCDLPDDAELLLDRPEYWVVRRDAANGLRRGDELAVTLTLDGEVRVSRNGSNPVTVMHVDHTLRLWAFVDVYGATQKVRMLSTQTVAQTPPPQLRVVAGAGSAGGAVLVVSLPPQAGGHQVNQQGLTLASAHYIEPIQATSQICLTGLQPLAQPSTCAQQFQSRPRNEVQCSSTQNSTNEQVQMPNGHPEPLRLVERLPSTSRQHQPVYSVIGEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTYKS

Summary

EMBL
BABH01041831    ODYU01007580    SOQ50470.1    NWSH01000365    PCG76954.1    KQ459580    + More
KPI99257.1    RSAL01000140    RVE46081.1    KZ150102    PZC73503.1    AP017493    BBB06766.1    JTDY01003228    KOB69918.1    AGBW02010985    OWR47426.1    KQ460911    KPJ10820.1    GEZM01062759    JAV69490.1    GEZM01062758    JAV69491.1    KQ971316    EEZ97846.1    JTDY01004041    KOB68675.1    GDKW01001343    JAI55252.1    GBBI01003821    JAC14891.1    GDIQ01002273    JAN92464.1    CVRI01000054    CRL00620.1    KQ982335    KYQ57657.1    GBHO01027311    GBHO01027310    GBRD01006278    JAG16293.1    JAG16294.1    JAG59543.1    GBHO01027403    GBHO01027312    GBRD01006276    GDHC01018384    JAG16201.1    JAG16292.1    JAG59545.1    JAQ00245.1    GBRD01006277    JAG59544.1    NCKU01000218    RWS16518.1    KQ760559    OAD59797.1    KQ414915    KOC59461.1    AJWK01013926    AJWK01013927    AJWK01013928    AJWK01013929    NCKU01000342    NCKU01000217    RWS15902.1    RWS16524.1    LNIX01000017    OXA45620.1    KB630343    ERL83544.1    JRES01000301    KNC32573.1    GAKP01009049    JAC49903.1    GDHF01002237    JAI50077.1    APGK01016968    APGK01016969    KB739995    KB631518    ENN82009.1    ERL84343.1    GBXI01000012    JAD14280.1    GDHF01029349    JAI22965.1    GBXI01016005    JAC98286.1    GAMC01021369    JAB85186.1    PZQS01000005    PVD30016.1    CH964232    EDW80716.2    CP012526    ALC47107.1    GFDL01012927    JAV22118.1    CH902617    KPU80202.1    EDV43324.1    KQ435812    KOX72842.1   
Pfam
PF07177   Neuralized
Interpro
IPR001841   Znf_RING        + More
IPR006573   NHR_dom       
IPR037962   Neuralized       
IPR013083   Znf_RING/FYVE/PHD       
IPR013087   Znf_C2H2_type       
Gene 3D
PDB
2YUE     E-value=6.18688e-67,     Score=647

Ontologies

Topology

Length:
592
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04085
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00184
outside
1  -  592
 
 

Population Genetic Test Statistics

Pi
211.651925
Theta
153.295932
Tajima's D
1.338141
CLR
0.302403
CSRT
0.747912604369781
Interpretation
Uncertain
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