Gene

KWMTBOMO14829

Pre Gene Modal

BGIBMGA012148

Annotation

PREDICTED:_synaptic_vesicular_amine_transporter-like_[Bombyx_mori]

Location

Bomo_Chr24(+):15930697-15954198      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.627

CDS

ATGGGTGTCGCGTCGGACGGCTTCAGTAGCAGGTGGCGTGCCAAGATAGCAGCGTGCAGGGAGTCCAGGAAGCTGGTGCTGATCATAGTGGCGATAGCTCTGCTCCTGGACAATATGCTGCTGACCACAGTCGTGCCGATCATCCCGGAATTCCTGTACGACATCCGGCACCCGGACGCTCCGCTGTCGCTCTCCCTGGATGAGGTCACGACCACGCCGCCTCCCCCCACCCCCTACTGCCCGTGTCTGGAGAAGAACGAAACCGTCACCGTCGAGAATGTAACCCACATCAACATTACCGCGGAGAAGGAATTCCGTCATCAGGAGCTCATCCACGAGACAGTCGCCGTCGGAGTAATGTTCGCCAGCAAAGCGATGGTACAACTACTCGCCAATCCATTTGTGGGACCGCTTACTCACAAAATCGGCTACAGCGTTCCTATGTTCACGGGCTTCGTACTAATGTTCCTGTCTACACTAATATTCGCCTTTGGTCGCTCATACGGAGTACTCTTCGTAGCTCGTGCGCTGCAAGGCATAGGATCCTCGTGTTCCTCCGTGTCAGGAATGGGTATGCTCGCCGAAAGATATCCTGATGATAAGGAACGCGGCAACGCTATGGGCATCGCACTCGGCGGTCTCGCTTTGGGCGTACTCATCGGCCCTCCGTTCGGCGGATTGATGTATGAGTTCGTGGGGAAGACTGCCCCTTTCCTGATGCTCTCCGCCTTGGCTCTCGGCGATGGATTACTGCAGCTGATGATACTTCAGCCGGGTGTCGTGAGGCAAGAGACGGAGCCCCCTTCTCTGAAGCAACTTGTGACCGATCCATACATATTGATTGCGGCTGGAAATGATTAA

Protein

MGVASDGFSSRWRAKIAACRESRKLVLIIVAIALLLDNMLLTTVVPIIPEFLYDIRHPDAPLSLSLDEVTTTPPPPTPYCPCLEKNETVTVENVTHINITAEKEFRHQELIHETVAVGVMFASKAMVQLLANPFVGPLTHKIGYSVPMFTGFVLMFLSTLIFAFGRSYGVLFVARALQGIGSSCSSVSGMGMLAERYPDDKERGNAMGIALGGLALGVLIGPPFGGLMYEFVGKTAPFLMLSALALGDGLLQLMILQPGVVRQETEPPSLKQLVTDPYILIAAGND

Uniprot

A0A194Q1R1   A0A2H1VWI0   A0A0G3VJM1   A0A2A4K0H5   A0A0N1IF53   A0A2W1BJT0   + More
H9JRI8   A0A212FLA4   D6WCE6   A0A1B6H9F3   A0A1B6GFK9   A0A1B6MNY0   A0A3L8DJ21   A0A1Y1LUM7   E2A6Q7   A0A2H1W595   A0A151I1Y2   A0A023F5K4   E2BYB1   A0A151WML1   F4WAE8   A0A224XNT6   Q7QA16   A0A182Q0V1   U5EXT5   A0A182VPB5   A0A182TMG9   A0A182HYM3   A0A182KZL8   A0A154PHY6   A0A067QJG3   A0A026WZV1   A0A195E3K9   A0A2J7PGA6   A0A088AEW1   A0A2J7PGA1   A0A1W7R845   A0A0M9A940   K7IN74   W8BJN2   T1IEV5   W8AUA2   A0A1L8DV01   A0A182RT59   A0A232FC88   A0A1J1IAC5   A0A0C9R6X7   A0A1B0GJY5   B4KMK2   A0A034VTW7   A0A1W4V4N6   A0A2A3ECA5   A0A0A1X969   A0A034VUM2   A0A1W4V475   A0A0K8W5P8   A0A0K8WCL3   A0A1B6CQC7   A0A0M4ECV2   A0A1B6CZ68   A0A182Y8U1   A0A182S8A0   A0A182FQV8   A0A182PP95   A0A226EJ02   A0A0L0C7L0   A0A182NSF7   A0A182JWD9   A0A182W3E4   A0A182XFD1   A0A182LYI5   A0A182GAP4   A0A182RZL5   Q16XQ1   B4JUI6   B4GGU6   B5DZ00   Q86NW1   Q8IGS0   B4QEF0   B3NRJ6   B4P4G4   W5J9Y7   B0WKN5   Q8IH57   A0A0J9U124   A0A0R3NTB9   A0A0L7QKQ4   A0A1I8N6E8   A0A0Q5VUY5   B3MGZ8   B4HQJ9   A0A2H8THS9   T1PG96   J9JQB2   A0A0P8XRC4   A0A3B0IZG9   A0A182JLJ3   B4MS88   A0A3B0IZR5  

Pubmed

26354079    28756777    19121390    22118469    18362917    19820115    + More
30249741    28004739    20798317    25474469    21719571    12364791    14747013    17210077    20966253    24845553    24508170    20075255    24495485    28648823    17994087    18057021    25348373    25830018    25244985    26108605    26483478    17510324    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    20920257    23761445    23185243    25315136   

EMBL

KQ459580    KPI99263.1    ODYU01004861    SOQ45173.1    KP657647    AKL78872.1    + More
NWSH01000309    PCG77559.1    KQ460396    KPJ15333.1    KZ150076    PZC73955.1    BABH01031841    BABH01031842    AGBW02007808    OWR54524.1    KQ971311    EEZ98884.1    GECU01036447    JAS71259.1    GECZ01008583    JAS61186.1    GEBQ01008923    GEBQ01002319    JAT31054.1    JAT37658.1    QOIP01000007    RLU20316.1    GEZM01050180    JAV75685.1    GL437183    EFN70897.1    ODYU01006398    SOQ48207.1    KQ976551    KYM80877.1    GBBI01002274    JAC16438.1    GL451420    EFN79390.1    KQ982937    KYQ49109.1    GL888048    EGI68831.1    GFTR01006603    JAW09823.1    AAAB01008898    EAA09208.4    AXCN02000236    GANO01002378    JAB57493.1    APCN01005389    KQ434902    KZC11104.1    KK853289    KDR08918.1    KK107072    EZA60649.1    KQ979701    KYN19656.1    NEVH01025635    PNF15361.1    PNF15360.1    GEHC01000360    JAV47285.1    KQ435710    KOX79730.1    GAMC01016736    JAB89819.1    ACPB03002277    ACPB03002278    ACPB03002279    ACPB03002280    ACPB03002281    GAMC01016738    JAB89817.1    GFDF01003969    JAV10115.1    NNAY01000480    OXU28083.1    CVRI01000047    CRK97208.1    GBYB01002516    GBYB01002517    JAG72283.1    JAG72284.1    AJWK01022443    AJWK01022444    AJWK01022445    AJWK01022446    AJWK01022447    CH933808    EDW10849.1    KRG05528.1    KRG05529.1    KRG05530.1    GAKP01013400    JAC45552.1    KZ288287    PBC29367.1    GBXI01008278    GBXI01007632    GBXI01007064    JAD06014.1    JAD06660.1    JAD07228.1    GAKP01013402    GAKP01013401    JAC45550.1    GDHF01031709    GDHF01005945    JAI20605.1    JAI46369.1    GDHF01003391    JAI48923.1    GEDC01021773    JAS15525.1    CP012524    ALC41627.1    GEDC01018581    JAS18717.1    LNIX01000003    OXA57439.1    JRES01000803    KNC28270.1    AXCM01001070    JXUM01009114    KQ560276    KXJ83355.1    CH477534    EAT39391.1    CH916374    EDV91156.1    CH479183    EDW35716.1    CM000071    EDY69069.1    BT003611    BT011335    AE013599    BT056262    AAO39614.1    AAR96127.1    AAX52707.1    AAX52708.1    ACL68709.1    AGB93488.1    BT001631    AAN71386.1    CM000362    CM002911    EDX06940.1    KMY93524.1    CH954179    EDV56148.1    CM000158    EDW90603.2    ADMH02001863    ETN60806.1    DS231974    EDS29966.1    BT001408    AAN71163.1    AAX52709.1    KMY93525.1    KMY93526.1    KRT02349.1    KRT02350.1    KQ414940    KOC59145.1    KQS62725.1    KQS62726.1    CH902619    EDV37916.1    CH480816    EDW47734.1    GFXV01001869    MBW13674.1    KA647832    AFP62461.1    ABLF02017448    KPU77103.1    OUUW01000001    SPP73764.1    CH963850    EDW74977.1    SPP73765.1   

Proteomes

UP000053268    UP000218220    UP000053240    UP000005204    UP000007151    UP000007266    + More
UP000279307    UP000000311    UP000078540    UP000008237    UP000075809    UP000007755    UP000007062    UP000075886    UP000075903    UP000075902    UP000075840    UP000075882    UP000076502    UP000027135    UP000053097    UP000078492    UP000235965    UP000005203    UP000053105    UP000002358    UP000015103    UP000075900    UP000215335    UP000183832    UP000092461    UP000009192    UP000192221    UP000242457    UP000092553    UP000076408    UP000075901    UP000069272    UP000075885    UP000198287    UP000037069    UP000075884    UP000075881    UP000075920    UP000076407    UP000075883    UP000069940    UP000249989    UP000008820    UP000001070    UP000008744    UP000001819    UP000000803    UP000000304    UP000008711    UP000002282    UP000000673    UP000002320    UP000053825    UP000095301    UP000007801    UP000001292    UP000007819    UP000268350    UP000075880    UP000007798   

PRIDE

H9JRI8    Q86NW1    Q8IGS0    Q8IH57   

Pfam

PF07690   MFS_1        + More
PF02949   7tm_6

Interpro

IPR036259   MFS_trans_sf        + More
IPR011701   MFS       
IPR020846   MFS_dom       
IPR004117   7tm6_olfct_rcpt       
IPR004734   Multidrug-R       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A194Q1R1   A0A2H1VWI0   A0A0G3VJM1   A0A2A4K0H5   A0A0N1IF53   A0A2W1BJT0   + More
H9JRI8   A0A212FLA4   D6WCE6   A0A1B6H9F3   A0A1B6GFK9   A0A1B6MNY0   A0A3L8DJ21   A0A1Y1LUM7   E2A6Q7   A0A2H1W595   A0A151I1Y2   A0A023F5K4   E2BYB1   A0A151WML1   F4WAE8   A0A224XNT6   Q7QA16   A0A182Q0V1   U5EXT5   A0A182VPB5   A0A182TMG9   A0A182HYM3   A0A182KZL8   A0A154PHY6   A0A067QJG3   A0A026WZV1   A0A195E3K9   A0A2J7PGA6   A0A088AEW1   A0A2J7PGA1   A0A1W7R845   A0A0M9A940   K7IN74   W8BJN2   T1IEV5   W8AUA2   A0A1L8DV01   A0A182RT59   A0A232FC88   A0A1J1IAC5   A0A0C9R6X7   A0A1B0GJY5   B4KMK2   A0A034VTW7   A0A1W4V4N6   A0A2A3ECA5   A0A0A1X969   A0A034VUM2   A0A1W4V475   A0A0K8W5P8   A0A0K8WCL3   A0A1B6CQC7   A0A0M4ECV2   A0A1B6CZ68   A0A182Y8U1   A0A182S8A0   A0A182FQV8   A0A182PP95   A0A226EJ02   A0A0L0C7L0   A0A182NSF7   A0A182JWD9   A0A182W3E4   A0A182XFD1   A0A182LYI5   A0A182GAP4   A0A182RZL5   Q16XQ1   B4JUI6   B4GGU6   B5DZ00   Q86NW1   Q8IGS0   B4QEF0   B3NRJ6   B4P4G4   W5J9Y7   B0WKN5   Q8IH57   A0A0J9U124   A0A0R3NTB9   A0A0L7QKQ4   A0A1I8N6E8   A0A0Q5VUY5   B3MGZ8   B4HQJ9   A0A2H8THS9   T1PG96   J9JQB2   A0A0P8XRC4   A0A3B0IZG9   A0A182JLJ3   B4MS88   A0A3B0IZR5  

PDB

2V8N     E-value=0.0642372,     Score=83

KEGG

101741951    K08155 MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member

GO

GO:0016021   GO:0055085   GO:0005335   GO:0030672   GO:0008504   GO:0006836   GO:0015842   GO:0043195   GO:0005549   GO:0004984   GO:0015238   GO:0008021   GO:0031594   GO:1904647   GO:1904340   GO:0051608   GO:0015872   GO:0015844   GO:0006281   GO:0008081   GO:0008270   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

286

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

95.3573299999999

Exp number, first 60 AAs:

22.86406

Total prob of N-in:

0.90152

POSSIBLE N-term signal

sequence

inside

1  -  24

TMhelix

25  -  47

outside

48  -  141

TMhelix

142  -  164

inside

165  -  170

TMhelix

171  -  193

outside

194  -  207

TMhelix

208  -  230

inside

231  -  286

 

 

Pi

187.700138

Theta

157.281877

Tajima's D

0.448905

CLR

0.478712

CSRT

0.499575021248938

Interpretation

Uncertain