SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14824
Annotation
PREDICTED:_TBC1_domain_family_member_5_homolog_A-like_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 4.186
 

Sequence

CDS
ATGAAGAAACGGAGGAAACAAACCACCAGCGACAGTGAGGATGAGCTGCCTCTAACTAAACTCTGTTCAGATGCGAACTCATACAAGAGCTTAACGAGGAATAGTATTGAAGTTTGTGAATTCTGTGACAAAGTGTTTAAAAATAGATACAAAAGCATAATCCATACCATGACGCACATCACAATACCGCTAATAAAGGACTCTTTAAAGCAATGTCTGAGCTGTAAATTATATTTTCCATCACAAGATGATCTGAAATGTCACGTGGCGAAGAAACATATCAAAATTGACTATACTAGTTTTAATGGTGGAAAAACGCCACTCCCACAATCTCAGGCAATGAGGTTAGAGAGTAATGTTAAATTGGAACCATTTTGTTTTGACAATAAGGAATCAAACGGTGACGTAAAACTCAAGAACTTAAAGCTGTTTAAAGATTTTAGCTCGTATAACTCCTTTGATCAATATAATAATGCTGTCATTAATAATACAAGAAGGAATATAAAGAGTAGAATACTTTTTGAGGATGAAGAAATACTATCCTCGCTAGACTCAAATTACCAGGAGAACATAATATGCAAGGAGGACTTGAAAAGTAATCCTAGTACGCTTACAAGTGTACATTATGATGAACTAATTGAATTTGGCAGATTTGACTGTAAATTTTGTAATAAAATATTCTATAGTAGATATGATAAAATCCTCCACGACACAAGTCACATCTCTCTCAGTCTCGAGCCCATGAATAAGCTACACAAGTGTCTGATCTGGAAAGCTGGTTAG
Protein
MKKRRKQTTSDSEDELPLTKLCSDANSYKSLTRNSIEVCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIKIDYTSFNGGKTPLPQSQAMRLESNVKLEPFCFDNKESNGDVKLKNLKLFKDFSSYNSFDQYNNAVINNTRRNIKSRILFEDEEILSSLDSNYQENIICKEDLKSNPSTLTSVHYDELIEFGRFDCKFCNKIFYSRYDKILHDTSHISLSLEPMNKLHKCLIWKAG

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       

Ontologies

Topology

Length:
260
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00863
Exp number, first 60 AAs:
0.00492
Total prob of N-in:
0.56620
inside
1  -  260
 
 

Population Genetic Test Statistics

Pi
204.878297
Theta
166.843802
Tajima's D
0.53287
CLR
0.030773
CSRT
0.524973751312434
Interpretation
Uncertain
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