Gene

KWMTBOMO14814

Annotation

Coiled-coil-helix-coiled-coil-helix_domain-containing_protein_8_[Papilio_xuthus]

Location

Bomo_Chr24(-):15650014-15650719      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.086

CDS

ATGACTATAAAACCTCGAGAACAGATCGGCAGTGATGATGATCCCGTGGAAGGCATGCTGAAAAAAACTGGCTGTCTGGAACTACACTATAAAGTGCAGGAATGCATCGCCGAAACGAAAGACTGGAGAAAGTGTCAAACCGCAGTTAATAATTTCAGAGATTGTATCAACAAACATAAACAGGAAGAAATAAATAAAAATAAACATTAA

Protein

MTIKPREQIGSDDDPVEGMLKKTGCLELHYKVQECIAETKDWRKCQTAVNNFRDCINKHKQEEINKNKH

Uniprot

A0A2W1BFT0   A0A212EWF9   A0A194Q122   A0A0L7KZL4   A0A0N1I8G9   S4PTI5   + More
A0A0B4KFX0   Q6XHQ9   A0A0P8Y7B6   E2A0J6   A0A195DA16   F4WZ26   B4R1Y2   A0A195BQS2   A0A158NDM5   A0A1I8PQ79   A0A088A800   A0A195F427   A0A0N0U542   A0A195CLA5   B4J4A7   B4HGC9   A0A0Q9XAP1   E0VR98   A0A1I8NE49   A0A1W4X2A1   A0A0Q9W2P6   A0A3B4YFF2   W5NN28   A0A232EN12   Q16H46   Q16ZN0   A0A1W4X270   A0A1D2ME77   B5X8U5   I3L004   A0A3B4HDI9   A0A3P8NSD8   A0A146ZNN6   A0A3Q1B5Z5   A0A3P8TV76   A0A2U9B7H6   A0A3Q2NNG8   A0A3Q2WM41   A0A3Q3ID44   A0A3P9JQZ5   F7E535   A0A182YMG7   A0A060YGR5   W5K721   A0A1A9YBG7   A0A1B0B2F3   A0A3Q4GRX0   F7E380   F7GHJ0   G4VQU1   A0A0B7A3W9   A0A0B7A4D5   A0A3B5A1K2   A0A3P8XKT3   K7F1N9   A0A1Y3BJP2   A0A2P4SPG0   R7TUV3   E7F2T5   A0A1U7RRR1   A0A151PJZ9   A0A210QB14   A0A3P8CPK7   A0A183A2K3   A0A3B4UVH7   M3WVV8   A0A0R3T9S8   A0A3Q7Y159   A0A384DEX1   D2H1F3  

Pubmed

28756777    22118469    26354079    26227816    23622113    10731132    + More
12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    14525923    17994087    17550304    20798317    21719571    21347285    20566863    25315136    28648823    17510324    27289101    20433749    25186727    17554307    20431018    25244985    24755649    25329095    18464734    17495919    22253936    25069045    17381049    23254933    23594743    22293439    28812685    17975172    20010809   

EMBL

KZ150076    PZC73969.1    AGBW02011995    OWR45825.1    KQ459580    KPI99282.1    + More
JTDY01004098    KOB68605.1    KQ460396    KPJ15351.1    GAIX01011978    JAA80582.1    AE014297    AGB95900.1    AHN57307.1    AY232124    CM000160    AAR10147.1    KRK03559.1    CH902619    KPU77303.1    GL435626    EFN72899.1    KQ981082    KYN09711.1    GL888465    EGI60529.1    CM000364    EDX13134.1    KQ976424    KYM88311.1    ADTU01012715    KQ981820    KYN35146.1    KQ435793    KOX74208.1    KQ977600    KYN01483.1    CH916367    EDW00587.1    CH480815    EDW42377.1    CH933808    KRG05484.1    DS235459    EEB15904.1    CH940648    KRF79385.1    AHAT01039766    NNAY01003254    OXU19726.1    CH478204    EAT33572.1    CH477488    EAT40096.1    LJIJ01001592    ODM91326.1    BT047464    ACI67265.1    AERX01046337    GCES01018372    JAR67951.1    CP026246    AWO99823.1    AAMC01108227    FR908510    CDQ88285.1    JXJN01007623    HE601631    CCD81553.1    HACG01028598    CEK75463.1    HACG01028597    CEK75462.1    AGCU01116149    MUJZ01020195    OTF80033.1    PPHD01031199    POI25959.1    AMQN01011905    KB309179    ELT95256.1    AL845438    BX088524    AKHW03000111    KYO49085.1    NEDP02004373    OWF45919.1    UZAN01005999    VDP34351.1    AANG04002890    UZAE01002372    VDN99674.1    ACTA01002017    GL192425    EFB28744.1   

Proteomes

UP000007151    UP000053268    UP000037510    UP000053240    UP000000803    UP000002282    + More
UP000007801    UP000000311    UP000078492    UP000007755    UP000000304    UP000078540    UP000005205    UP000095300    UP000005203    UP000078541    UP000053105    UP000078542    UP000001070    UP000001292    UP000009192    UP000009046    UP000095301    UP000192223    UP000008792    UP000261360    UP000018468    UP000215335    UP000008820    UP000094527    UP000087266    UP000005207    UP000261460    UP000265100    UP000257160    UP000265080    UP000246464    UP000265000    UP000264840    UP000261600    UP000265200    UP000008143    UP000076408    UP000193380    UP000018467    UP000092443    UP000092460    UP000261580    UP000002279    UP000002280    UP000008854    UP000261400    UP000265140    UP000007267    UP000014760    UP000000437    UP000189705    UP000050525    UP000242188    UP000050740    UP000261420    UP000011712    UP000046398    UP000278807    UP000286642    UP000261680    UP000008912   

Pfam

PF05404   TRAP-delta        + More
PF06747   CHCH
PF01981   PTH2

Interpro

IPR039870   Coa4-like        + More
IPR008855   TRAP-delta       
IPR009069   Cys_alpha_HP_mot_SF       
IPR010625   CHCH       
IPR023476   Pep_tRNA_hydro_II_dom_sf       
IPR002833   PTH2       

SUPFAM

SSF47072   SSF47072        + More
SSF102462   SSF102462       

Gene 3D

3.40.1490.10    

CDD

cd02430  PTH2

ProteinModelPortal

A0A2W1BFT0   A0A212EWF9   A0A194Q122   A0A0L7KZL4   A0A0N1I8G9   S4PTI5   + More
A0A0B4KFX0   Q6XHQ9   A0A0P8Y7B6   E2A0J6   A0A195DA16   F4WZ26   B4R1Y2   A0A195BQS2   A0A158NDM5   A0A1I8PQ79   A0A088A800   A0A195F427   A0A0N0U542   A0A195CLA5   B4J4A7   B4HGC9   A0A0Q9XAP1   E0VR98   A0A1I8NE49   A0A1W4X2A1   A0A0Q9W2P6   A0A3B4YFF2   W5NN28   A0A232EN12   Q16H46   Q16ZN0   A0A1W4X270   A0A1D2ME77   B5X8U5   I3L004   A0A3B4HDI9   A0A3P8NSD8   A0A146ZNN6   A0A3Q1B5Z5   A0A3P8TV76   A0A2U9B7H6   A0A3Q2NNG8   A0A3Q2WM41   A0A3Q3ID44   A0A3P9JQZ5   F7E535   A0A182YMG7   A0A060YGR5   W5K721   A0A1A9YBG7   A0A1B0B2F3   A0A3Q4GRX0   F7E380   F7GHJ0   G4VQU1   A0A0B7A3W9   A0A0B7A4D5   A0A3B5A1K2   A0A3P8XKT3   K7F1N9   A0A1Y3BJP2   A0A2P4SPG0   R7TUV3   E7F2T5   A0A1U7RRR1   A0A151PJZ9   A0A210QB14   A0A3P8CPK7   A0A183A2K3   A0A3B4UVH7   M3WVV8   A0A0R3T9S8   A0A3Q7Y159   A0A384DEX1   D2H1F3  

KEGG

101738248    K18177 cytochrome c oxidase assembly factor 4 | (RefSeq) cytochrome c oxidase assembly factor 4 homo

GO

GO:0033617   GO:0005758   GO:0016021   GO:0005783   GO:0033108   GO:0004045  

PANTHER

PTHR13639   PTHR12731   PTHR12649  

Length:

69

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.49241

outside

1  -  69

 

 

Pi

180.636468

Theta

201.780178

Tajima's D

-0.329842

CLR

1.037769

CSRT

0.28063596820159

Interpretation

Uncertain