Gene

KWMTBOMO14813

Pre Gene Modal

BGIBMGA012204

Annotation

RSM22-like_protein?_mitochondrial_[Operophtera_brumata]

Location

Bomo_Chr24(-):15648401-15649879      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.34 Nuclear   Reliability : 1.808

CDS

ATGTTTCGTAAACTCAAATATTCACATATTTCGTCTTTAAGCGCCAACTACTCAACCAAAGTCTCAATAGATCCAAATTTAAAGGAAAGCTTTGACGCGCAGATCTATAAGCCACGGAAACATCCAGGAACCAATCGTGTAAAAATAGCATCAATACCTGCGGATATTCGGAAGGCAATTAAAATAATCCTAGACGATGCACGAGCTAAATCTTTACATCAGGAGAGCATTAAGCTCAAAAACCATCTGCAGTCTAGGCTACTGCCGCCAGAAGAAAAGGAAATTAATTTGAAAGCCGCGCAAATTCACGACAGCATTTCACAACGGACATTCTCTAAAATAAACAAAGAATTGAGCCAGGAGGAGTTGCAAAACATGAAAAAACAGGTACAGAATACTGTATTTAATATATTAAAAACGAACGTGTACCGTTGGGGTAATATATCGTACGATAAACCTACTAGTCTTCAATATTTGATGACCAGGGCTGCCCCGGAATACGCTGTCTTGGTTCGCGTATTAGATGAGATCAGAAGGGTTTTACCAGATTACAAGCCACGAAGCTTTTTTGACTTTGGTTCCGGCGTCGGAACCGGTACATGGGCACTGAACACATATTGGAAAGGAGAAATTTATGAATATTTTTGTGTCGATACATCGGCTCACATGCACGATTTGGCACGCTTAATTTTGTGTGAAGGCAAGGACAACGTCGAATTACCGTATAAATGTTATTACCAGCGTCAATTTCTACCTGCTTCCACAGATCTGAGGTACAATATAGTTTTGTCCGCGTACTCATTATTTGAACTACCCTCGATGAAATCAAGATTAGAAACAATACAAAAACTATGGAACAAGACCGAAGATTTCCTAATAATCATCGAACACGGAACAAATGCCGGATTCAGAGCTGTAAACGAAGCCAGAGAATTCATTTTGAATCTCCCAAAAGACAGCAGTAATAGAGGTTACGCATTCTCTCCGTGTCCAAACGACAGTGTTTGTCCAAGATACCTCGACCATCAAACTCCATGTAACTTCTTAATGAAGTACGAATCGCTAGGCTACCATTCAAAGTCTGAAGTTTTAGCAGATTTGTACACATATGTTATTTTAAGGAAAGGTGATCGACCAAATGACGATCCACAGTGGCCTAGGATTGTAAGGGCTCCGATTGTCAGGTCCGGACACACGATCTGTCGGATGTGTACAGCACAAGGAGAGTTAAAAGAAATTATATTTTCTAAAGGGAAGCACGATCAGACTATGTACAGATGTGCTAGGTCTGCTAATTGGGGAGATCTTTTACCTATAAAATAA

Protein

MFRKLKYSHISSLSANYSTKVSIDPNLKESFDAQIYKPRKHPGTNRVKIASIPADIRKAIKIILDDARAKSLHQESIKLKNHLQSRLLPPEEKEINLKAAQIHDSISQRTFSKINKELSQEELQNMKKQVQNTVFNILKTNVYRWGNISYDKPTSLQYLMTRAAPEYAVLVRVLDEIRRVLPDYKPRSFFDFGSGVGTGTWALNTYWKGEIYEYFCVDTSAHMHDLARLILCEGKDNVELPYKCYYQRQFLPASTDLRYNIVLSAYSLFELPSMKSRLETIQKLWNKTEDFLIIIEHGTNAGFRAVNEAREFILNLPKDSSNRGYAFSPCPNDSVCPRYLDHQTPCNFLMKYESLGYHSKSEVLADLYTYVILRKGDRPNDDPQWPRIVRAPIVRSGHTICRMCTAQGELKEIIFSKGKHDQTMYRCARSANWGDLLPIK

Uniprot

H9JRP4   A0A1E1WB91   A0A2W1BGH6   A0A2H1VP70   A0A0L7L006   A0A2A4KAK7   + More
A0A0N1PH39   A0A194Q1S9   A0A1W4X7B9   A0A2J7QJV5   A0A067QP49   A0A182HCK1   A0A182GI75   N6UGG0   A0A139WKD9   A0A1S4F5R1   Q17ED0   A0A2P8Z603   A0A336MME2   A0A1B6D0H8   B0W2N5   A0A1Q3F4Z2   X1WIV5   A0A1B6KGD8   A0A088AG90   A0A1B0ABA6   A0A1B0C547   A0A1A9WHI7   A0A1A9YGN5   T1JKY4   A0A1Y1NKX5   A0A151X6N9   A0A1B0G0H3   A0A1J1IL91   A0A1I8PCM7   W8C6G2   A0A0P4VSF8   R4G459   A0A0J7L4U1   A0A195FDX9   A0A0L0CGS4   A0A1B0CI71   A0A158NT12   F4WY74   A0A3L8D9Q8   A0A026WX61   A0A151I3Z8   A0A1A9VE64   E9JB90   A0A293MTC1   A0A034VQJ4   A0A2H8TNB9   A0A195EHH4   A0A0A1WVI0   A0A0K8TXX6   A0A1Z5KWS7   A0A226F1H8   A0A0A9W281   A0A1D2NIC2   A0A069DUL8   A0A232F246   B4MX31   A0A1W4UF49   A0A195CDA5   A0A224XCX0   B4HWD6   A0A146KPW7   B4Q8A6   A0A0M4EH63   A0A0M3QTJ9   A0A3B0JU49   A0A0J9QZ60   B4M9F8   A0A1I8MQF1   A0A0C9QQX9   A0A023F790   B4JCG3   B3MPB9   Q29NF2   B4NYQ1   B4G7U4   A0A3Q0JJ30   A0A1I8PCX4   A0A0K8RLK2   A0A2R5L7K8   A0A131YAG9   Q9VL60   E2AZT0   B4KH31   A0A2L2YJ90   G3MS09   A0A2L2YH28   B3N8L2   A0A131XRG8   E9G9G8   W4Z116   A0A1E1XFU8   A0A087TYU0   A0A224Z466   A0A131Z0P3  

Pubmed

19121390    28756777    26227816    26354079    24845553    26483478    + More
23537049    18362917    19820115    17510324    29403074    28004739    24495485    27129103    26108605    21347285    21719571    30249741    24508170    21282665    25348373    25830018    28528879    25401762    27289101    26334808    28648823    17994087    26823975    22936249    25315136    25474469    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20798317    26561354    22216098    28049606    21292972    28503490    28797301    26830274   

EMBL

BABH01031877    GDQN01006857    JAT84197.1    KZ150242    PZC71900.1    ODYU01003634    + More
SOQ42631.1    JTDY01004098    KOB68604.1    NWSH01000015    PCG80823.1    KQ460396    KPJ15353.1    KQ459580    KPI99283.1    NEVH01013549    PNF28864.1    KK853117    KDR11155.1    JXUM01127565    KQ567205    KXJ69558.1    JXUM01065665    KQ562359    KXJ76071.1    APGK01026943    APGK01026944    APGK01026945    KB740648    KB632054    ENN79731.1    ERL88343.1    KQ971328    KYB28386.1    CH477283    EAT44846.1    PYGN01000180    PSN51932.1    UFQT01001740    SSX31604.1    GEDC01018165    JAS19133.1    DS231827    EDS29343.1    GFDL01012428    JAV22617.1    ABLF02009804    GEBQ01029492    JAT10485.1    JXJN01025826    JH431850    GEZM01003500    JAV96766.1    KQ982476    KYQ56061.1    CCAG010007529    CVRI01000055    CRL00928.1    GAMC01001132    JAC05424.1    GDKW01001726    JAI54869.1    ACPB03000223    GAHY01001630    JAA75880.1    LBMM01000722    KMQ97636.1    KQ981636    KYN38875.1    JRES01000418    KNC31436.1    AJWK01013066    ADTU01025470    GL888439    EGI60831.1    QOIP01000011    RLU17217.1    KK107078    EZA60433.1    KQ976472    KYM83978.1    GL770938    EFZ09912.1    GFWV01003134    GFWV01018621    MAA43349.1    GAKP01015119    JAC43833.1    GFXV01002963    MBW14768.1    KQ978957    KYN27309.1    GBXI01011874    JAD02418.1    GDHF01033178    JAI19136.1    GFJQ02007552    JAV99417.1    LNIX01000001    OXA63328.1    GBHO01044629    GBHO01044628    JAF98974.1    JAF98975.1    LJIJ01000037    ODN04716.1    GBGD01001383    JAC87506.1    NNAY01001263    OXU24569.1    CH963857    EDW76670.1    KQ978023    KYM98058.1    GFTR01006179    JAW10247.1    CH480818    EDW52331.1    GDHC01020065    JAP98563.1    CM000361    EDX04428.1    CP012523    ALC40217.1    ALC39043.1    OUUW01000010    SPP85634.1    CM002910    KMY89372.1    CH940654    EDW57834.2    GBYB01003067    JAG72834.1    GBBI01001605    JAC17107.1    CH916368    EDW03117.1    CH902620    EDV32238.1    CH379060    EAL33390.2    CM000157    EDW88715.1    CH479180    EDW28442.1    GADI01001838    JAA71970.1    GGLE01001324    MBY05450.1    GEFM01000314    JAP75482.1    AE014134    AY070900    AAF52836.1    AAL48522.1    AHN54301.1    GL444277    EFN61059.1    CH933807    EDW12242.1    IAAA01027933    LAA07440.1    JO844660    AEO36277.1    IAAA01027934    LAA07442.1    CH954177    EDV58435.1    GEFH01000305    JAP68276.1    GL732536    EFX83878.1    AAGJ04067069    GFAC01001038    JAT98150.1    KK117371    KFM70279.1    GFPF01009726    MAA20872.1    GEDV01004195    JAP84362.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000192223    + More
UP000235965    UP000027135    UP000069940    UP000249989    UP000019118    UP000030742    UP000007266    UP000008820    UP000245037    UP000002320    UP000007819    UP000005203    UP000092445    UP000092460    UP000091820    UP000092443    UP000075809    UP000092444    UP000183832    UP000095300    UP000015103    UP000036403    UP000078541    UP000037069    UP000092461    UP000005205    UP000007755    UP000279307    UP000053097    UP000078540    UP000078200    UP000078492    UP000198287    UP000094527    UP000215335    UP000007798    UP000192221    UP000078542    UP000001292    UP000000304    UP000092553    UP000268350    UP000008792    UP000095301    UP000001070    UP000007801    UP000001819    UP000002282    UP000008744    UP000079169    UP000000803    UP000000311    UP000009192    UP000008711    UP000000305    UP000007110    UP000054359   

PRIDE

H9JRP4    Q9VL60   

Pfam

PF09243   Rsm22        + More
PF01223   Endonuclease_NS

Interpro

IPR029063   SAM-dependent_MTases        + More
IPR015324   Ribosomal_Rsm22-like       
IPR001604   DNA/RNA_non-sp_Endonuclease       
IPR020821   Extracellular_endonuc_su_A       
IPR001083   Cu_fist_DNA-bd_dom       

SUPFAM

SSF53335   SSF53335       

ProteinModelPortal

H9JRP4   A0A1E1WB91   A0A2W1BGH6   A0A2H1VP70   A0A0L7L006   A0A2A4KAK7   + More
A0A0N1PH39   A0A194Q1S9   A0A1W4X7B9   A0A2J7QJV5   A0A067QP49   A0A182HCK1   A0A182GI75   N6UGG0   A0A139WKD9   A0A1S4F5R1   Q17ED0   A0A2P8Z603   A0A336MME2   A0A1B6D0H8   B0W2N5   A0A1Q3F4Z2   X1WIV5   A0A1B6KGD8   A0A088AG90   A0A1B0ABA6   A0A1B0C547   A0A1A9WHI7   A0A1A9YGN5   T1JKY4   A0A1Y1NKX5   A0A151X6N9   A0A1B0G0H3   A0A1J1IL91   A0A1I8PCM7   W8C6G2   A0A0P4VSF8   R4G459   A0A0J7L4U1   A0A195FDX9   A0A0L0CGS4   A0A1B0CI71   A0A158NT12   F4WY74   A0A3L8D9Q8   A0A026WX61   A0A151I3Z8   A0A1A9VE64   E9JB90   A0A293MTC1   A0A034VQJ4   A0A2H8TNB9   A0A195EHH4   A0A0A1WVI0   A0A0K8TXX6   A0A1Z5KWS7   A0A226F1H8   A0A0A9W281   A0A1D2NIC2   A0A069DUL8   A0A232F246   B4MX31   A0A1W4UF49   A0A195CDA5   A0A224XCX0   B4HWD6   A0A146KPW7   B4Q8A6   A0A0M4EH63   A0A0M3QTJ9   A0A3B0JU49   A0A0J9QZ60   B4M9F8   A0A1I8MQF1   A0A0C9QQX9   A0A023F790   B4JCG3   B3MPB9   Q29NF2   B4NYQ1   B4G7U4   A0A3Q0JJ30   A0A1I8PCX4   A0A0K8RLK2   A0A2R5L7K8   A0A131YAG9   Q9VL60   E2AZT0   B4KH31   A0A2L2YJ90   G3MS09   A0A2L2YH28   B3N8L2   A0A131XRG8   E9G9G8   W4Z116   A0A1E1XFU8   A0A087TYU0   A0A224Z466   A0A131Z0P3  

PDB

3G5L     E-value=0.0178583,     Score=90

KEGG

101738387    no KO assigned | (RefSeq) methyltransferase-like protein 17, mitochondrial

GO

GO:0006412   GO:0008168   GO:0016021   GO:0003676   GO:0046872   GO:0016787   GO:0003735   GO:0005763   GO:0003700   GO:0005507   GO:0003677   GO:0005634   GO:0008270   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

440

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01195

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00859

outside

1  -  440

 

 

Pi

172.44418

Theta

174.002426

Tajima's D

-0.171468

CLR

371.960219

CSRT

0.328183590820459

Interpretation

Uncertain