Gene

KWMTBOMO14810

Pre Gene Modal

BGIBMGA012206

Annotation

PREDICTED:_beta-TrCP_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(-):15596501-15616679      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.362

CDS

ATGGAGACTGAAAAGATGATAGAGGATACAATACCACCTCAGGTGACGTCACTGACAAGTTTGGACAGCGGCGTCAGACCGGTGCCCAGCAGCCCTGCGTACGCGGCGGAAAGGGACGCATGCCTCAACTACTTCACAAGATGGAACGAGACAGATCAGGTGGAATTCGTGGAGCAACTCCTGGCTAGGATGTGCCACTACCAGCACGGTCACATCAATGCCTACCTCAAACCGATGCTACAAAGGGATTTCATCAGTATGCTGCCCAAAAAAGGCCTGGACCACGTCGCAGAGAACATACTGTCGTACCTGGACGCGAGCTCTCTATGTGCGGCCGAGTTGGTTTGCCGCGAGTGGTTGAGGGTGATATCGGAAGGGATGCTGTGGAAGAAGCTCATCGAGAGGAAGGTCCGTACGGATTCGCTGTGGCGCGGCCTCGCCGAGCGGAGGGGATGGATACAGTACCTGTTCAAACCGAAGCCTGGCTGCCAACATCCGTCACACTCATTCTACAGACAACTATATCCCAAGATAATAAAGGACATACAATCTATAGAGGACAATTGGAGAATGGGAAAACATAATTTACAGAGGATAAACTGCAGATCGGAGAATTCCAAAGGCGTATATTGCTTACAGTACGACGACAATAAGATAGTATCGGGCCTTAGAGATAACACAATAAAAATATGGGACAGAAAGACACTGCAGTGCGTCAGAGAGCTGCAAGGTCACACGGGGTCGGTTCTGTGCCTGCAGTACGACGAGCGCGCCATCATATCCGGCTCGTCGGACTCCACCGTGCGCGTGTGGGACGTGTCCACGGGCGCCATGCTCAACACGCTCATCCACCACTGCGAGGCGGTGCTGCACCTGCGCTTCTGCAACGGGATGATGGTCACTTGCAGCAAGGATCGTTCGATAGCCGTGTGGGATATGACGTCGACGACGGAGATAATGCTGAGGCGAGTGCTGGTGGGACACAGGGCCGCTGTCAATGTCGTTGACTTTGACGAGAAATATATTGTCAGTGCGTCCGGTGATAGAACTATAAAAGTGTGGAACACGTCGTCGTGCGAGTTCGTGCGCACGCTGAACGGGCACAAGCGCGGGATCGCGTGCCTGCAGTACCGGGACCGGCTCGTCGTGTCGGGGTCCTCGGACAACACCATCCGGCTGTGGGACATCGAGTGCGGCTCGTGCATCCGGGTGCTCGAGGGGCACGAGGAGCTCGTGCGCTGCATACGGTTTGACAATAAGCGAATCGTGAGCGGCGCTTACGACGGGAAGATCAAGGTGTGGGACCTGCCGGCCGCGCTGGACGTGCGGACGCCGCACCAGGACCTCTGTCTGCGGACCTTAGTCGAGCACACGGGACGCGTGTTCCGTCTTCAGTTCGACGAGTTCCAGATCGTGTCCTCGTCGCACGACGACACCATCCTCGTGTGGGACTTCCTCAACTACAGCGGCGCCTCGCCCCCGCCGCGCGCGCGCTCGCCCGCAGATAGGGACCTGTTCGACTAG

Protein

METEKMIEDTIPPQVTSLTSLDSGVRPVPSSPAYAAERDACLNYFTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENILSYLDASSLCAAELVCREWLRVISEGMLWKKLIERKVRTDSLWRGLAERRGWIQYLFKPKPGCQHPSHSFYRQLYPKIIKDIQSIEDNWRMGKHNLQRINCRSENSKGVYCLQYDDNKIVSGLRDNTIKIWDRKTLQCVRELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVSTGAMLNTLIHHCEAVLHLRFCNGMMVTCSKDRSIAVWDMTSTTEIMLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGSCIRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLPAALDVRTPHQDLCLRTLVEHTGRVFRLQFDEFQIVSSSHDDTILVWDFLNYSGASPPPRARSPADRDLFD

Uniprot

A0A2A4KAJ7   A0A212FH45   B0LD01   A0A3S2NFP0   H9JRP6   A0A1B6KLX4   + More
A0A1B6MRL7   A0A1B6ES90   A0A1W4W7I9   A0A026WFB0   A0A1B6CC84   A0A1Y1KGE5   A0A067R8E5   A0A1I8PA79   T1PL36   T1PN63   A0A1I8ND78   A0A1L8DH31   A0A1Q3EYT9   A0A0T6B2M8   A0A2R7WET0   A0A1Q3EYK2   A0A158NB94   A0A1B0GJW1   A0A1I8PA01   A0A151IL99   D3TQV9   A0A1A9YK70   A0A1A9UN95   A0A1B0AAD3   A0A1A9WJK9   A0A0A1XCR0   A0A0L0BWW9   A0A0K8W2K5   A0A034WA21   E9IHL0   B0XD69   A0A0A9XZW6   A0A151WEI1   W8CDX0   A0A0K8TRD5   A0A151IZN9   A0A195BER5   A0A2M4CHY4   F4X395   A0A2M4CII9   A0A182F894   A0A2M4CI32   B4KCB7   A0A146M9S9   T1HWK9   U5ERW5   A0A195FGU1   A0A0C9S100   A0A2H8TUZ4   B4LZ71   A0A336LPF4   B4NIQ3   K7INY6   A0A0M4F279   A0A336LKG4   Q17FK5   A0A1W4VZN1   B4JUH1   A0A182GTT4   B4IKK5   A0A1B0G6V2   B3M2V7   A0A0V0GC22   A0A023F5S4   A0A182XBH4   A0A0B4KHK1   D6WA15   A0A182I0B4   Q7PYH7   A0A182IPG3   T1JH37   A0A182N618   B4GEK6   Q9VDE3   A0A182RXK6   A0A3B0KEI6   B5DX68   B3P056   A0A0L7QYS1   A0A088AF87   B4R143   A0A182VHE3   A0A182VR23   A0A182U0P5   A0A182GL27   O44382   A0A1W4VLH4   A0A224XP08   A0A232F8B2   A0A2H8TH75   X1WJC1   W5JHR0   A0A0M9AA13   A0A2M4AJC9  

Pubmed

22118469    18184036    18183285    19121390    24508170    30249741    + More
28004739    24845553    25315136    21347285    20353571    25830018    26108605    25348373    21282665    25401762    24495485    26369729    21719571    17994087    26823975    20075255    17510324    26483478    25474469    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    18362917    19820115    12364791    14747013    17210077    10781936    26109357    26109356    15632085    9461217    28648823    20920257    23761445   

EMBL

NWSH01000015    PCG80813.1    AGBW02008539    OWR53066.1    EF649713    ABV22506.1    + More
RSAL01000132    RVE46359.1    BABH01031887    GEBQ01027529    JAT12448.1    GEBQ01001419    JAT38558.1    GECZ01028989    JAS40780.1    KK107250    QOIP01000002    EZA54371.1    RLU25362.1    GEDC01026220    JAS11078.1    GEZM01086215    JAV59668.1    KK852636    KDR19729.1    KA649429    AFP64058.1    KA649393    AFP64022.1    GFDF01008389    JAV05695.1    GFDL01014574    JAV20471.1    LJIG01016197    KRT81325.1    KK854722    PTY18174.1    GFDL01014663    JAV20382.1    ADTU01000258    ADTU01000259    ADTU01000260    AJWK01022422    AJWK01022423    KQ977151    KYN05261.1    EZ423811    ADD20087.1    GBXI01005561    GBXI01005304    JAD08731.1    JAD08988.1    JRES01001304    KNC23739.1    GDHF01026513    GDHF01007199    JAI25801.1    JAI45115.1    GAKP01006537    GAKP01006531    GAKP01006529    JAC52421.1    GL763289    EFZ19930.1    DS232744    EDS45323.1    GBHO01018683    GBRD01017019    JAG24921.1    JAG48808.1    KQ983238    KYQ46279.1    GAMC01001211    GAMC01001209    JAC05345.1    GDAI01000669    JAI16934.1    KQ980685    KYN14533.1    KQ976509    KYM82655.1    GGFL01000784    MBW64962.1    GL888609    EGI59076.1    GGFL01000783    MBW64961.1    GGFL01000785    MBW64963.1    CH933806    EDW13726.2    GDHC01002126    JAQ16503.1    ACPB03006429    GANO01003530    JAB56341.1    KQ981606    KYN39608.1    GBYB01006906    GBYB01014341    GBYB01014928    JAG76673.1    JAG84108.1    JAG84695.1    GFXV01001714    GFXV01001752    GFXV01003713    GFXV01004864    GFXV01005826    MBW13519.1    MBW13557.1    MBW15518.1    MBW16669.1    MBW17631.1    CH940650    EDW67078.2    UFQT01000038    SSX18449.1    CH964272    EDW83767.1    CP012526    ALC45500.1    SSX18450.1    CH477270    EAT45338.1    CH916374    EDV91141.1    JXUM01087889    JXUM01087890    JXUM01087891    JXUM01087892    KQ563664    KXJ73522.1    CH480853    EDW51609.1    CCAG010013874    CH902617    EDV43487.2    GECL01000460    JAP05664.1    GBBI01002189    JAC16523.1    AE014297    AGB96182.1    KQ971312    EEZ99274.1    APCN01002058    APCN01002059    AAAB01008987    EAA01159.5    JH432222    CH479182    EDW34041.1    AF222923    AF222924    AY118898    AAF55853.1    AAF63213.1    AAF63214.1    AAM50758.1    AGB96181.1    OUUW01000007    SPP83461.1    CM000070    EDY68228.2    CH954181    EDV48292.1    KQ414688    KOC63697.1    CM000364    EDX12130.1    JXUM01071135    JXUM01071136    JXUM01071137    JXUM01071138    JXUM01071139    JXUM01071140    JXUM01071141    KQ562646    KXJ75418.1    AF032878    AAC38852.1    GFTR01006697    JAW09729.1    NNAY01000749    OXU26699.1    GFXV01001659    MBW13464.1    ABLF02022108    ABLF02022109    ADMH02001488    ETN62344.1    KQ435706    KOX80285.1    GGFK01007526    MBW40847.1   

Proteomes

UP000218220    UP000007151    UP000283053    UP000005204    UP000192223    UP000053097    + More
UP000279307    UP000027135    UP000095300    UP000095301    UP000005205    UP000092461    UP000078542    UP000092443    UP000078200    UP000092445    UP000091820    UP000037069    UP000002320    UP000075809    UP000078492    UP000078540    UP000007755    UP000069272    UP000009192    UP000015103    UP000078541    UP000008792    UP000007798    UP000002358    UP000092553    UP000008820    UP000192221    UP000001070    UP000069940    UP000249989    UP000001292    UP000092444    UP000007801    UP000076407    UP000000803    UP000007266    UP000075840    UP000007062    UP000075880    UP000075884    UP000008744    UP000075900    UP000268350    UP000001819    UP000008711    UP000053825    UP000005203    UP000000304    UP000075903    UP000075920    UP000075902    UP000215335    UP000007819    UP000000673    UP000053105   

PRIDE

H9JRP6    Q9VDE3    O44382   

Pfam

PF12125   Beta-TrCP_D        + More
PF00400   WD40
PF12937   F-box-like

Interpro

IPR001810   F-box_dom        + More
IPR021977   Beta-TrCP_D       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR036047   F-box-like_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       

SUPFAM

SSF81383   SSF81383        + More
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A2A4KAJ7   A0A212FH45   B0LD01   A0A3S2NFP0   H9JRP6   A0A1B6KLX4   + More
A0A1B6MRL7   A0A1B6ES90   A0A1W4W7I9   A0A026WFB0   A0A1B6CC84   A0A1Y1KGE5   A0A067R8E5   A0A1I8PA79   T1PL36   T1PN63   A0A1I8ND78   A0A1L8DH31   A0A1Q3EYT9   A0A0T6B2M8   A0A2R7WET0   A0A1Q3EYK2   A0A158NB94   A0A1B0GJW1   A0A1I8PA01   A0A151IL99   D3TQV9   A0A1A9YK70   A0A1A9UN95   A0A1B0AAD3   A0A1A9WJK9   A0A0A1XCR0   A0A0L0BWW9   A0A0K8W2K5   A0A034WA21   E9IHL0   B0XD69   A0A0A9XZW6   A0A151WEI1   W8CDX0   A0A0K8TRD5   A0A151IZN9   A0A195BER5   A0A2M4CHY4   F4X395   A0A2M4CII9   A0A182F894   A0A2M4CI32   B4KCB7   A0A146M9S9   T1HWK9   U5ERW5   A0A195FGU1   A0A0C9S100   A0A2H8TUZ4   B4LZ71   A0A336LPF4   B4NIQ3   K7INY6   A0A0M4F279   A0A336LKG4   Q17FK5   A0A1W4VZN1   B4JUH1   A0A182GTT4   B4IKK5   A0A1B0G6V2   B3M2V7   A0A0V0GC22   A0A023F5S4   A0A182XBH4   A0A0B4KHK1   D6WA15   A0A182I0B4   Q7PYH7   A0A182IPG3   T1JH37   A0A182N618   B4GEK6   Q9VDE3   A0A182RXK6   A0A3B0KEI6   B5DX68   B3P056   A0A0L7QYS1   A0A088AF87   B4R143   A0A182VHE3   A0A182VR23   A0A182U0P5   A0A182GL27   O44382   A0A1W4VLH4   A0A224XP08   A0A232F8B2   A0A2H8TH75   X1WJC1   W5JHR0   A0A0M9AA13   A0A2M4AJC9  

PDB

1P22     E-value=0,     Score=1892

KEGG

101738795    K03362 F-box and WD-40 domain protein 1/11 | (RefSeq) beta-TrCP

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)
04310    Wnt signaling pathway - Bombyx mori (domestic silkworm)
04341    Hedgehog signaling pathway - fly - Bombyx mori (domestic silkworm)
04624    Toll and Imd signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0046983   GO:0045475   GO:0090090   GO:0090162   GO:0030708   GO:2000114   GO:0045849   GO:0060623   GO:0046599   GO:0032436   GO:0019005   GO:0030727   GO:0046843   GO:0046627   GO:1904801   GO:0030713   GO:0000209   GO:0030720   GO:1903688   GO:0032007   GO:0045451   GO:0007088   GO:0006508   GO:0045879   GO:0060253   GO:0051219   GO:0043066   GO:0007309   GO:0007623   GO:0030162   GO:0016567   GO:0031146   GO:0007304   GO:0008285   GO:0030707   GO:0007293   GO:0030687   GO:0070545   GO:0016322   GO:0004842   GO:0005654   GO:0005829   GO:0016021   GO:0005515   GO:0015937   GO:0008270   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

507

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00121

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00434

outside

1  -  507

 

 

Pi

246.340099

Theta

16.983371

Tajima's D

1.598396

CLR

0.680778

CSRT

0.819259037048148

Interpretation

Uncertain