SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14805
Pre Gene Modal
BGIBMGA012139
Annotation
hypothetical_protein_KGM_01195_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 2.605
 

Sequence

CDS
ATGCAGAATATTCGCAAGATGATTACAATCTCCTTGAGCATCATGGTTCTACTCTGCAACGTGCCTTTGTCGCAAGCCATCGACTGTTTCAAATGCGTTTCAATGAACGGGAAATTCCCGCCATGCGACGATCCCTTCCACAACAATCATTCGCTGCAAATGCTGGAGGCGTCCTGTATGGGGGGCAGGAAGGGAAGGGACGGCCTGTTCCCTGCAACTTCGTGCATTAAAATAGCCGGTGTCTTCGATGACACAGGCGAAACCATAACAGTGCGAGGTTGTGGTTTAGACTCTGGTACGGCCACTACTGACACTGAAATCATAAGGATGTCTCATTGCGGAAGATTCTATTACAATAACAGATACGTCCATGGCTGTCTTCAGAGCTGCAACGACGCTGACGCCTGCAACTCGGCGAAGGAATATGGACCTTATGTGACAGTCTTGTCGCTCATTTACCTCGCGCTCATAATGTTCATGAGCTAA
Protein
MQNIRKMITISLSIMVLLCNVPLSQAIDCFKCVSMNGKFPPCDDPFHNNHSLQMLEASCMGGRKGRDGLFPATSCIKIAGVFDDTGETITVRGCGLDSGTATTDTEIIRMSHCGRFYYNNRYVHGCLQSCNDADACNSAKEYGPYVTVLSLIYLALIMFMS

Summary

EMBL
BABH01031898    NWSH01000049    PCG80213.1    ODYU01002186    SOQ39355.1    KQ458863    + More
KPJ04693.1    KQ460648    KPJ13144.1    KZ150302    PZC71529.1    CCAG010017775    AJVK01068041    AXCN02000004    JXJN01016665    JXJN01016666    AXCM01012478    KQ971380    EEZ97572.1    AAAB01008859    APCN01000320    EAA07696.4    CH902617    EDV42949.1    KPU80009.1    KPU80010.1    KPU80011.1    CH477243    EAT46341.1    GAMC01003259    GAMC01003258    GAMC01003257    JAC03298.1    UFQS01000097    UFQT01000097    SSW99384.1    SSX19764.1    GAKP01004862    JAC54090.1    GBXI01011301    JAD02991.1    CVRI01000050    CRK99266.1    CM000364    EDX14534.1    AY071413    AE014297    AAL49035.1    AAN14379.1    CH480828    EDW45098.1    JRES01000664    KNC29450.1    JXUM01015376    JXUM01015377    JXUM01015378    JXUM01015379    KQ560428    KXJ82461.1    CM000160    EDW98645.1    OUUW01000007    SPP83274.1    CM000070    EAL28301.1    CH479182    EDW33980.1    CH954182    EDV53563.1    AGBW02010436    OWR48519.1    CH964272    EDW84155.1    AJWK01016186    CH940650    EDW67018.1    KRF83056.1    KRF83057.1    KRF83058.1    KRF83059.1    CH916369    EDV93703.1    GECZ01012205    JAS57564.1    ATLV01026662    KE525416    KFB53242.1    CH933806    EDW15220.1    KRG01447.1    KRG01448.1    GECU01026843    JAS80863.1    GL448636    EFN84062.1    GEBQ01002147    JAT37830.1    GEBQ01011699    JAT28278.1    KQ414915    KOC59466.1    GECU01004796    JAT02911.1    GL888341    EGI62453.1    KQ982335    KYQ57651.1    ADTU01014953    ACPB03007662    KQ979568    KYN20995.1    KQ981864    KYN34152.1    GL442209    EFN63799.1    KQ976580    KYM79947.1    GL768174    EFZ11852.1    KK107020    EZA62525.1    CP012526    ALC45280.1    KQ977721    KYN00358.1    LNIX01000001    OXA63439.1    GL732565    EFX77025.1    GDIQ01103651    JAL48075.1    GEDC01019996    JAS17302.1    KX950847    ARU12057.1    GDIP01145961    JAJ77441.1    GDIQ01032885    JAN61852.1    QOIP01000006    RLU21801.1    GGMS01002714    MBY71917.1    AK342049    BAH72231.1    ABLF02028833    ABLF02028838    GGMR01011417    MBY24036.1    GGMR01011739    MBY24358.1    MWRG01001069    PRD34786.1   
Pfam
PF05199   GMC_oxred_C        + More
PF00732   GMC_oxred_N
Interpro
IPR036188   FAD/NAD-bd_sf        + More
IPR007867   GMC_OxRtase_C       
IPR000172   GMC_OxRdtase_N       
SUPFAM
SSF51905   SSF51905       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 26,         Likelihood:  0.998107
 
 
Length:
161
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.67574
Exp number, first 60 AAs:
2.61759
Total prob of N-in:
0.94492
inside
1  -  141
TMhelix
142  -  159
outside
160  -  161
 
 

Population Genetic Test Statistics

Pi
188.760057
Theta
2.868234
Tajima's D
1.614342
CLR
0.377339
CSRT
0.844457777111144
Interpretation
Uncertain
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