Gene

KWMTBOMO14804  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012211

Annotation

PREDICTED:_programmed_cell_death_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr24(-):15470981-15495039      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.198

CDS

ATGGAAGTCGATCGCATCGCTTCCGACTCTGAAAACGTGGCGATGGACGAAAAGCCGGTCGTAGAACAGGGCGCCGGAGACGCTGCGACGTCCAATCCCGAGCGATTACGTCGCAAGAACAAGAAATACGCTCGTTCTAACAGCAAGGACGGGCCGAGCGCTGTGACGCCGCTCCCGAAATATCGTAGCTGGAAGAACAGCCGAAGACCACGCAATGGCCACGGCAGGGGGTTACCGAAGAAAGGTGGGGCGGGAGGCAAAGGCGTGTGGGGTCTGCCCGGATCTGAGATGCTCGAGGAGTACGTGGAGGACCAGAACGATCCGAACTACGATTCGGAGGCGGTCACCAACGGCGACATCGAATTCAAGCAGGTCATAGTCGAAGCGGAGCCCGAGGATATTATCCGTAAATCCGAGCCTGTGATATTAGAGTATTTTGAGCATGGAGACACGAACGCGGCCGCCGAGGAGTTCCTAGACTTTGTGACGGCGGCGAGGAGTCATCTGGTGTGCGAGACAATTGTGGAGATAGCGTTGGATCACAAGGCGATGCACTGCGAAATGGCCTCGGTCCTCATATCCGATCTGTATGGAAGAGTTTTTTCAGCCAAAGACATCGGCTACGCGTTCGAGCGTCTGCTGGAGAAGCTGCCGGACCTGGTGCTGGACACGCCGGACGCGGCGCTGCTGCTGTCCAACTTCATAGCGCGCTGCGTGGCCGACGACTGCCTGCCGCCGCGCTTCGTGCAGGCGCAGGCCGCCGCCGCGCTCTCCGCGCCCGCCAGACAAGCTATACACAGAGCTGAGACTCTACTGTCTATGAAGCAAGGGCTAGTGAGGCTGGACAACATATGGGGCGTCGGCGGAGGTATCAGGCCGGTCAAGTCTCTCATCCGTCAGATCCAGTTGCTGCTGAAGGAGTACCTGACTTCGGGCGAGCTCGCGGAGGCGATGCGCTGCGTGCGGGAGTTGGAGGTTCCTCACTTCCACCACGAGCTGGTCTACGAGACAATACTCCTGGCTTTGGAGACCATAAATTCTGGTGTTGAAGAACAGCTTTGCACGTTTCTTGCTGAATTGCGGAGGTGCTGTATAGTCACGCCCGACCAAATGGACAGGGGCTTCATCCGCGTGCTCGAGGATATGAATGATATCGTCCTGGACGTGCCTCTCGCTTACATCATGCTGGACAGGTTCTTGGAGCGGTGCCAGACGAGGTTCAGGCTCGGGGACAACGTGCTGAAGCGTGTGCCGACGAGAGGTCGCAAGCGCTTCGTGTCCGAAGGAGACGGGGGCGCCATCAAGGATCACGCGCTGAAGCTGCGCGAGTGA

Protein

MEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKKYARSNSKDGPSAVTPLPKYRSWKNSRRPRNGHGRGLPKKGGAGGKGVWGLPGSEMLEEYVEDQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVTAARSHLVCETIVEIALDHKAMHCEMASVLISDLYGRVFSAKDIGYAFERLLEKLPDLVLDTPDAALLLSNFIARCVADDCLPPRFVQAQAAAALSAPARQAIHRAETLLSMKQGLVRLDNIWGVGGGIRPVKSLIRQIQLLLKEYLTSGELAEAMRCVRELEVPHFHHELVYETILLALETINSGVEEQLCTFLAELRRCCIVTPDQMDRGFIRVLEDMNDIVLDVPLAYIMLDRFLERCQTRFRLGDNVLKRVPTRGRKRFVSEGDGGAIKDHALKLRE

Uniprot

A0A2A4K7K2   A0A1E1W475   S4PC15   A0A212FIK6   A0A212F461   A0A0N0PAF5   + More
A0A2J7QSG0   A0A0L7L1Q6   A0A067QIK1   A0A0V0G3E2   A0A1W4WT55   A0A069DZ08   A0A224XGH1   A0A0T6B278   A0A0A9WWJ2   A0A1B6D254   A0A0K8TJ43   A0A0P4VUE5   R4FPP6   T1I1S7   A0A0K8TJP3   A0A034VEW0   A0A1L8DLU4   A0A1B6FUN2   A0A1Y1K444   A0A1B6LV66   A0A139WNU3   A0A1I8PVG0   A0A0K8VCS3   W8AY20   A0A0A1WK73   T1PCP1   A0A1I8MS75   D6WCT0   A0A0L0C0V7   D3TLD2   A0A023ESW1   U5ER32   A0A0K8TR71   A0A170Z2Q9   Q178N5   A0A1S4FBU7   A0A139WNA9   A0A182YCV3   A0A1Q3F416   A0A0A9WN83   N6T432   A0A0M4F8Y5   A0A1Q3F450   B4L2D8   A0A1Q3F435   A0A182MEH7   A0A1Q3F496   B4JL70   B4N1Z3   A0A1Q3F498   A0A0K8T7B4   B4M1I6   A0A3B0J7L6   A0A0P9AB19   B3MW12   A0A182QIS6   B0X887   B4Q2F7   A0A1W4VGL6   B5DM27   B4GY82   B3NVZ4   A0A182XJZ8   A0A1B0CHF0   A0A182VB79   A0A2M4BLG1   A0A1A9XZZ5   A0A1A9Z209   A0A336MNK8   A0A1A9VD60   A0A1A9WAQ5   A0A1B0B3Z7   W5JS62   Q9VY91   Q7QFA1   A0A1B0G2U4   E0VG43   A0A3R7NZL3   A0A182RHN7   A0A2M4A997   A0A1D2N058   A0A2M3Z1F2   A0A2M3Z1D0   A0A2M3Z1A1   V5I0L4   A0A182N8I4   L7MAM7   A0A182IPZ4   A0A023FIX2   A0A224Z6H7   A0A131YUA9  

Pubmed

23622113    22118469    26354079    26227816    24845553    26334808    + More
25401762    27129103    25348373    28004739    18362917    19820115    24495485    25830018    25315136    26108605    20353571    24945155    26369729    17510324    25244985    23537049    17994087    18057021    17550304    15632085    23185243    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    12364791    20566863    27289101    25765539    25576852    28797301    26830274   

EMBL

NWSH01000049    PCG80211.1    GDQN01009266    JAT81788.1    GAIX01004356    JAA88204.1    + More
AGBW02008362    OWR53570.1    AGBW02010436    OWR48520.1    KQ458863    KPJ04696.1    NEVH01011876    PNF31524.1    JTDY01003547    KOB69365.1    KK853313    KDR08650.1    GECL01003621    JAP02503.1    GBGD01001465    JAC87424.1    GFTR01006292    JAW10134.1    LJIG01016163    KRT81426.1    GBHO01034394    JAG09210.1    GEDC01017516    JAS19782.1    GBRD01000209    JAG65612.1    GDKW01000940    JAI55655.1    GAHY01000113    JAA77397.1    ACPB03016273    GBRD01000205    JAG65616.1    GAKP01018647    JAC40305.1    GFDF01006703    JAV07381.1    GECZ01015938    JAS53831.1    GEZM01097804    JAV54096.1    GEBQ01012406    JAT27571.1    KQ971311    KYB29481.1    GDHF01015662    GDHF01013713    JAI36652.1    JAI38601.1    GAMC01020816    GAMC01020815    GAMC01020814    GAMC01020813    GAMC01020812    JAB85741.1    GBXI01015377    GBXI01003097    JAC98914.1    JAD11195.1    KA646537    KA649545    AFP61166.1    EEZ99057.2    JRES01001065    KNC25876.1    EZ422234    ADD18510.1    GAPW01001215    JAC12383.1    GANO01002991    JAB56880.1    GDAI01000731    JAI16872.1    GEMB01002669    JAS00524.1    CH477361    EAT42655.1    KYB29480.1    GFDL01012733    JAV22312.1    GBHO01034395    JAG09209.1    APGK01053429    APGK01053430    APGK01053431    APGK01053432    KB741223    KB631623    ENN72393.1    ERL84761.1    CP012528    ALC48570.1    GFDL01012703    JAV22342.1    CH933810    EDW07799.1    GFDL01012748    JAV22297.1    AXCM01001073    GFDL01012661    JAV22384.1    CH916370    EDW00323.1    CH963925    EDW78382.2    GFDL01012660    JAV22385.1    GBRD01004515    JAG61306.1    CH940651    EDW65540.1    OUUW01000003    SPP78097.1    CH902625    KPU75458.1    EDV35157.1    KPU75457.1    AXCN02002231    DS232478    EDS42356.1    CM000162    EDX01618.1    CH379064    EDY72544.1    KRT06432.1    CH479197    EDW27738.1    CH954180    EDV47159.1    AJWK01012304    AJWK01012305    AJWK01012306    AJWK01012307    AJWK01012308    GGFJ01004744    MBW53885.1    UFQS01000843    UFQT01000749    UFQT01000843    SSX07225.1    SSX26939.1    SSX27568.1    JXJN01008132    ADMH02000256    ETN67227.1    AE014298    BT023835    AAF48312.2    AAZ86756.1    ABW09411.1    AGB95374.1    AGB95375.1    AAAB01008846    EAA06267.4    CCAG010022379    DS235131    EEB12349.1    QCYY01002318    ROT71268.1    GGFK01004052    MBW37373.1    LJIJ01000339    ODM98620.1    GGFM01001517    MBW22268.1    GGFM01001573    MBW22324.1    GGFM01001525    MBW22276.1    GANP01001876    JAB82592.1    GACK01004821    JAA60213.1    AXCP01007732    GBBK01002611    JAC21871.1    GFPF01010784    MAA21930.1    GEDV01006821    JAP81736.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000235965    UP000037510    UP000027135    + More
UP000192223    UP000015103    UP000007266    UP000095300    UP000095301    UP000037069    UP000008820    UP000076408    UP000019118    UP000030742    UP000092553    UP000009192    UP000075883    UP000001070    UP000007798    UP000008792    UP000268350    UP000007801    UP000075886    UP000002320    UP000002282    UP000192221    UP000001819    UP000008744    UP000008711    UP000076407    UP000092461    UP000075903    UP000092443    UP000092445    UP000078200    UP000091820    UP000092460    UP000000673    UP000000803    UP000007062    UP000092444    UP000009046    UP000283509    UP000075900    UP000094527    UP000075884    UP000075880   

PRIDE

Q9VY91   

Pfam

PF02847   MA3

Interpro

IPR039778   PDCD4        + More
IPR016021   MIF4-like_sf       
IPR016024   ARM-type_fold       
IPR003891   Initiation_fac_eIF4g_MI       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.40.180    

ProteinModelPortal

A0A2A4K7K2   A0A1E1W475   S4PC15   A0A212FIK6   A0A212F461   A0A0N0PAF5   + More
A0A2J7QSG0   A0A0L7L1Q6   A0A067QIK1   A0A0V0G3E2   A0A1W4WT55   A0A069DZ08   A0A224XGH1   A0A0T6B278   A0A0A9WWJ2   A0A1B6D254   A0A0K8TJ43   A0A0P4VUE5   R4FPP6   T1I1S7   A0A0K8TJP3   A0A034VEW0   A0A1L8DLU4   A0A1B6FUN2   A0A1Y1K444   A0A1B6LV66   A0A139WNU3   A0A1I8PVG0   A0A0K8VCS3   W8AY20   A0A0A1WK73   T1PCP1   A0A1I8MS75   D6WCT0   A0A0L0C0V7   D3TLD2   A0A023ESW1   U5ER32   A0A0K8TR71   A0A170Z2Q9   Q178N5   A0A1S4FBU7   A0A139WNA9   A0A182YCV3   A0A1Q3F416   A0A0A9WN83   N6T432   A0A0M4F8Y5   A0A1Q3F450   B4L2D8   A0A1Q3F435   A0A182MEH7   A0A1Q3F496   B4JL70   B4N1Z3   A0A1Q3F498   A0A0K8T7B4   B4M1I6   A0A3B0J7L6   A0A0P9AB19   B3MW12   A0A182QIS6   B0X887   B4Q2F7   A0A1W4VGL6   B5DM27   B4GY82   B3NVZ4   A0A182XJZ8   A0A1B0CHF0   A0A182VB79   A0A2M4BLG1   A0A1A9XZZ5   A0A1A9Z209   A0A336MNK8   A0A1A9VD60   A0A1A9WAQ5   A0A1B0B3Z7   W5JS62   Q9VY91   Q7QFA1   A0A1B0G2U4   E0VG43   A0A3R7NZL3   A0A182RHN7   A0A2M4A997   A0A1D2N058   A0A2M3Z1F2   A0A2M3Z1D0   A0A2M3Z1A1   V5I0L4   A0A182N8I4   L7MAM7   A0A182IPZ4   A0A023FIX2   A0A224Z6H7   A0A131YUA9  

PDB

3EIQ     E-value=6.77256e-69,     Score=663

KEGG

101743674    K16865 programmed cell death protein 4 | (RefSeq) programmed cell death protein 4-like

GO

GO:0045892   GO:0015018   GO:0005634   GO:0005829   GO:0030727   GO:2000738   GO:0005488   GO:0008270   GO:0015937   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR12626  

Length:

443

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00362

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00713

outside

1  -  443

 

 

Pi

302.266582

Theta

149.89562

Tajima's D

0.633711

CLR

158.344282

CSRT

0.551422428878556

Interpretation

Uncertain