Gene

KWMTBOMO14803

Annotation

PREDICTED:_uncharacterized_protein_LOC106106229_isoform_X3_[Papilio_polytes]

Location

Bomo_Chr24(+):15455170-15456704      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.698

CDS

ATGGCGGAGAGCAAAAACGACGATAGCAAGAATTTATTTTACACGATGGACGCTGTGCCAAAGTTCACGGGTGATGACATCACGTACTCTTCTGCGAAGTGGACACAAGATCTCGACGATAATGCCGATATATTTGGGTGGAGCCAGCAGCAGAAACTCATTATAGCGCGACGATGTTTAGCTGGAACAGCAGAATTATGGCTAAAAAGCGAAAAAACTTTCAGAAGTTACGAAGAACTAAAAGTGGCTTTGATGAAGGAATTCCCTGAGGTGATAAACAGTAAACAAATGCATGAGACAATGAGCAGACGGAAAAAACAACCCAATGAGTCGTTTTATCAATATATGCTCGTAATGAAAGAACTCGGAAAAAGAGCTAAGTTTCCGGATTACGTCGCGATTCAGTATATAATCGACGGAATATCTGACTATGAATCTAACAAGTTGTTATTCTACGGGGTAACGTCGTATTCTGTGCTCAAGGAGAAATTAGTATTATATGAAAGTTTCAAAGAGAAGTCCAAAAAAAGTGTTGATACCATGAGACGAGGTCAGCGAGACACGGCGGTAATGCCTAGACAGGTTCATCGATGTTACAATTGTGGTGAAAGAGGGCACCTATCTAGTTCCTGCCGCAGAGGTATCAAATGCTTCAAGTGCAACGGGTTCGGGCACAAGGGTACGGAGTGCCGCGCATCACAAGGTATGGAAGCTAAAAAAGCATCAAATAATTATTATGGAGGAGGTGATGAACAAGATCGGCGATCTATGTTTGTTCGACAGCAGGAGGACGACGAGAAGAACGAGAACGAACTATACGAACGTGAGCAATGCGATTTAAAAGAGCAATAG

Protein

MAESKNDDSKNLFYTMDAVPKFTGDDITYSSAKWTQDLDDNADIFGWSQQQKLIIARRCLAGTAELWLKSEKTFRSYEELKVALMKEFPEVINSKQMHETMSRRKKQPNESFYQYMLVMKELGKRAKFPDYVAIQYIIDGISDYESNKLLFYGVTSYSVLKEKLVLYESFKEKSKKSVDTMRRGQRDTAVMPRQVHRCYNCGERGHLSSSCRRGIKCFKCNGFGHKGTECRASQGMEAKKASNNYYGGGDEQDRRSMFVRQQEDDEKNENELYEREQCDLKEQ

Uniprot

A0A2A4JPY0   A0A2A4K4A8   A0A2A4JH77   A0A2H1VAI8   A0A2A4K0J9   A0A2A4J1N2   + More
A0A2A4J7U9   A0A2A4J934   A0A2A4JBF8   A0A0J7K9X8   A0A023F013   A0A023EZG2   A0A023EYH9   A0A0J7KQL1   A0A023EYF0   A0A0J7KCU5   A0A0A1XB16   T1H9C0   A0A3L8DTV3   W8BB66   A0A0K8URI1   A0A0A1X9Z0   J9HJJ8   A0A034WUA4   D7ELA7   J9JZ77   A0A2M4BF33   A0A2M4BF27   A0A0K8U2D9   A0A1L8DIN4   A0A212FCW5   T1I533   A0A139WKB5   A0A0A1XFE9   W8APB2   X1X261   A0A023EY26   W8C8Q1   A0A1B0CR74   A0A2M4BFF1   A0A2M4BFM2   A0A2M4BDJ8   A0A1B0CKJ5   A0A2M4BF88   A0A139WE33   W8C3C0   A0A069DWV3   A0A034VAM6   A0A2M4BDL5   A0A224XHR1   J9JQ65   A0A0K8V149   A0A2M3Z2X0   J9JNX9   A0A0J7K0N3   A0A2M4AEU2   A0A0E4G8D8   A0A1S4HEU1   A0A2M3Z3Z7   A0A0K8U1E2   A0A182YRB3   A0A151IWN5   W8B0V9   A0A1I8NEC0   A0A1I8NEC4   A0A182W804   A0A1I8NJL7   A0A1W7R6L8   A0A1B0CGZ5   T1IC96   A0A0A9YCQ1  

Pubmed

25474469    25830018    30249741    24495485    17510324    25348373    + More
18362917    19820115    22118469    26334808    12364791    25244985    25315136    25401762   

EMBL

NWSH01000799    PCG74125.1    NWSH01000198    PCG78490.1    NWSH01001586    PCG70783.1    + More
ODYU01001505    SOQ37806.1    NWSH01000337    PCG77293.1    NWSH01004261    PCG65293.1    NWSH01002797    PCG67520.1    NWSH01002403    PCG68369.1    NWSH01002225    PCG68884.1    LBMM01010976    KMQ87102.1    GBBI01004613    JAC14099.1    GBBI01004551    JAC14161.1    GBBI01004550    JAC14162.1    LBMM01004258    KMQ92652.1    GBBI01004549    JAC14163.1    LBMM01009423    KMQ88147.1    GBXI01005773    JAD08519.1    ACPB03028153    QOIP01000004    RLU23736.1    GAMC01016174    JAB90381.1    GDHF01023027    JAI29287.1    GBXI01006173    JAD08119.1    CH478509    EJY58114.1    GAKP01001187    JAC57765.1    KQ972211    EFA11958.2    ABLF02014660    ABLF02042774    GGFJ01002513    MBW51654.1    GGFJ01002514    MBW51655.1    GDHF01031400    JAI20914.1    GFDF01007768    JAV06316.1    AGBW02009151    OWR51557.1    ACPB03006966    KQ971327    KYB28419.1    GBXI01004632    JAD09660.1    GAMC01020207    JAB86348.1    ABLF02005127    ABLF02005129    ABLF02007401    GBBI01004477    JAC14235.1    GAMC01007326    JAB99229.1    AJWK01024440    GGFJ01002621    MBW51762.1    GGFJ01002620    MBW51761.1    GGFJ01001974    MBW51115.1    AJWK01016333    GGFJ01002579    MBW51720.1    KQ971355    KYB26210.1    GAMC01002792    JAC03764.1    GBGD01000341    JAC88548.1    GAKP01019383    JAC39569.1    GGFJ01001952    MBW51093.1    GFTR01008753    JAW07673.1    ABLF02005846    GDHF01019733    JAI32581.1    GGFM01002109    MBW22860.1    ABLF02011059    LBMM01018094    KMQ83877.1    GGFK01005990    MBW39311.1    HACL01000135    CFW94429.1    AAAB01008984    GGFM01002486    MBW23237.1    GDHF01031998    JAI20316.1    KQ980852    KYN12192.1    GAMC01015907    JAB90648.1    GEHC01000930    JAV46715.1    AJWK01011772    ACPB03027146    GBHO01014721    JAG28883.1   

Proteomes

UP000218220    UP000036403    UP000015103    UP000279307    UP000008820    UP000007266    + More
UP000007819    UP000007151    UP000092461    UP000076408    UP000078492    UP000095301    UP000075920   

Pfam

PF00098   zf-CCHC        + More
PF00077   RVP
PF00078   RVT_1
PF00665   rve
PF17921   Integrase_H2C2
PF17919   RT_RNaseH_2
PF02037   SAP
PF17917   RT_RNaseH
PF03732   Retrotrans_gag
PF00067   p450
PF14392   zf-CCHC_4
PF09668   Asp_protease

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR000477   RT_dom       
IPR018061   Retropepsins       
IPR041577   RT_RNaseH_2       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR036361   SAP_dom_sf       
IPR003034   SAP_dom       
IPR041373   RT_RNaseH       
IPR005162   Retrotrans_gag_dom       
IPR002401   Cyt_P450_E_grp-I       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR036396   Cyt_P450_sf       
IPR025836   Zn_knuckle_CX2CX4HX4C       
IPR019103   Peptidase_aspartic_DDI1-type       

SUPFAM

SSF57756   SSF57756        + More
SSF50630   SSF50630       
SSF53098   SSF53098       
SSF68906   SSF68906       
SSF48264   SSF48264       

Gene 3D

2.40.70.10     3.30.420.10     1.10.720.30     1.10.630.10    

ProteinModelPortal

A0A2A4JPY0   A0A2A4K4A8   A0A2A4JH77   A0A2H1VAI8   A0A2A4K0J9   A0A2A4J1N2   + More
A0A2A4J7U9   A0A2A4J934   A0A2A4JBF8   A0A0J7K9X8   A0A023F013   A0A023EZG2   A0A023EYH9   A0A0J7KQL1   A0A023EYF0   A0A0J7KCU5   A0A0A1XB16   T1H9C0   A0A3L8DTV3   W8BB66   A0A0K8URI1   A0A0A1X9Z0   J9HJJ8   A0A034WUA4   D7ELA7   J9JZ77   A0A2M4BF33   A0A2M4BF27   A0A0K8U2D9   A0A1L8DIN4   A0A212FCW5   T1I533   A0A139WKB5   A0A0A1XFE9   W8APB2   X1X261   A0A023EY26   W8C8Q1   A0A1B0CR74   A0A2M4BFF1   A0A2M4BFM2   A0A2M4BDJ8   A0A1B0CKJ5   A0A2M4BF88   A0A139WE33   W8C3C0   A0A069DWV3   A0A034VAM6   A0A2M4BDL5   A0A224XHR1   J9JQ65   A0A0K8V149   A0A2M3Z2X0   J9JNX9   A0A0J7K0N3   A0A2M4AEU2   A0A0E4G8D8   A0A1S4HEU1   A0A2M3Z3Z7   A0A0K8U1E2   A0A182YRB3   A0A151IWN5   W8B0V9   A0A1I8NEC0   A0A1I8NEC4   A0A182W804   A0A1I8NJL7   A0A1W7R6L8   A0A1B0CGZ5   T1IC96   A0A0A9YCQ1  

PDB

2BL6     E-value=3.10498e-05,     Score=111

KEGG

NA   

GO

GO:0008270   GO:0003676   GO:0004190   GO:0015074   GO:0020037   GO:0016021   GO:0005506   GO:0016705   GO:0005634   GO:0015937   GO:0016701   GO:0006355   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

283

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00224

Exp number, first 60 AAs:

0.00033

Total prob of N-in:

0.10357

outside

1  -  283

 

 

Pi

311.100633

Theta

189.17493

Tajima's D

1.962552

CLR

12.620595

CSRT

0.88145592720364

Interpretation

Uncertain