Gene
KWMTBOMO14801
Pre Gene Modal
BGIBMGA014357
Annotation
gag-pol_polyprotein?_partial_[Lasius_niger]
Location in the cell
Nuclear Reliability : 3.385
Sequence
CDS
ATGGATTCTACAGTTTATGCAGCCAATGATGAAAAAATGAAAGCACAAGGATCAGGTACTGTCCATGGAATCTCATGTGATTTACAAAAGACTTTATTTATACCAGACCTAGCACAAAACCTTTTGTCTGTAAATTGTGTTACCAACAATGATGGCTCTGTTGTGTTCACAAAGAATAAAGTGGAGATTTACAAAAATTCAAAATTAATTTTAACCGGCAAAAAAGAAAATGGCTTATACAGGGTGAATTTAGTACAAGACCTGAAAAATAAAAATAAATCTTTACTTACACAAGTAAATGGAACAGCATTGGAATGGCATGCAAAACTGGGACACCCAGGTAAATCAGTACTAGAAACACTAACAAAAGTTGCAGACGGCATAAATATACAAGGACCAAAAGTATTACAAGAACAGTGTAAAATATGTGCTGAAGCAAAACAGTCAAGACTACCATTTACTACAATCAGAACTCGTGCTGAAAGATACCTACAAATAATACACACAGACATATGTGGTCCCTTCGAGGAAAAGACTCATGATGGATATAGATATGTATTAACAATAATGGACGACTACAGTCATTTTACAAAAATCTATTTACTTAAAAACAAGAGCGATGCAAAAGCAGAAATTAAAAATTATATTGAAGAAACGGAGCGAGAGAAAAATAGTAAAGTATCAATTATAAGATGCGACAACGGAGGTGAATATACAAGTAACGATTTTAAAGCATTTTGTCAACAAAAAGGCATAAAATTAGACTACACAGTGCCCTACTCACCACAATTAAATGGAAAAGCTGAACGCCTAAACCGGACATTATTAGAAAAAACAAGAGCATTACTCTTTGATTCTAAATTGAACAAAGAAATGTGGGGTGAAGCAATATATTGTGCTACTTATATTTTAAACAGACTACCAAGTGATGCCCTGAAAAACAAAACACCATATGAAATGTGGGTTGGAAAAAAGCCTAATATATCTAATATGCAAAAGTTTGGTTCTACTGTCTATGCAAAACAGTTACATCCAAATGTAAAGAAACTGGATCCTAGAAGCAAGAAACTAATAATGATTGGATACACTAATAATGGGTACAGACTGTGGAATGACAAGGAGAGAAAAATAGAGATATCAAGGGACATAGTGATAGTAAAAAGTGAAACTGAACAAAAGAAAGAAAACTATAAGAAAATAAATAATAATAAAAGTGAAAATGATGAAAAAGAGACAACAGAAAACCAGGAAGAGACTATAGAAAACCAGGAACAGATTATAGAACAGCAGGAAGAGACAACAGAAGATACCAGAACAGAAGATAATAAAAATGATGAGACTTTTGAAGATGTAGTATCAGAAACTGAATCAGAAGACACAGAAAGAGAAAGAAACAGACATCATGAAGAAAACGGTTACCTAAGAAGAAGCAAGAGAATTAAACACATACCAATACATTTAAGAGACTACAGTTTACTTACTTACAGAGAGGCTGTAACATCTAAAGAGGGAGAAAACTGGGAGAAGGCCATAAATTCGGAGAAGGAATCCCTAAAAATCAATAATACCTGGGAAATAGTAGACAAGAAAGAGGCAAAAGATAGTAAAATACTTACAAACAAATGGGTATTCCGTGTGAAAGATAATGGGACTTATAAAGCTAGACTTGTCGTACGAGGATTTGAACAAAATAGTATTGACTACAATGAAATATACAGTCCAGTTGTCAGTCAGTCAACTTTAAAATCTTTATTTGCACTTGCTGCTTCTAAAGACTATAACATGATGACATTTGATGTTAAGACTGCATTTTTATATGGAGAGCTGGATGAAAATGTGTATATGAATATACCGGATGATGATGGACTTGCTTTGGCTAAAGAAAAGCAAACATTAAAAAACATTTTAAACTGCTTAGAAAAGGAATTTGAAATAAAAGTATACAATGATCCTACTACTTTTATTGGATTTGAAGTCAAAAAGACTGAGAAAGGTATAACACTGAAACAAGAAAGCTACATTGGAAACTTATTAAAGAAATTCAGTATGGAAGATTCTCAACCTGTTAATACACCCTGCAATACAGAAAATAAAACAGAAACGCAAAACACAGATTCTATAAATTTTCCATATAGAGAACTGATTGGAGGACTTCTATATGTATCTACAAGAACAAGACCAGACATAAGTCAAGCTGTAAATGAAGCAAGCAGAAAAATAGAAAACCCTACGAAAGATGATGTGATAGCTGCAAAGAAAATACTAAAATATTTAAATGGAACAAGACAGAAAGGAATCATGTACAAGAAAGGAGGAGATATGTCAAAACTAAATGCATACTGTGATGCAGACTATGCCAATTGTATCAAGACAAGACGCAGTACAACCGGATTTGTGATAATGTTAGCAGAAGGACCTGTCTTGGTGTTCAAAACGACAACCAATCGTTGCATTATCATCAACTGA
Protein
MDSTVYAANDEKMKAQGSGTVHGISCDLQKTLFIPDLAQNLLSVNCVTNNDGSVVFTKNKVEIYKNSKLILTGKKENGLYRVNLVQDLKNKNKSLLTQVNGTALEWHAKLGHPGKSVLETLTKVADGINIQGPKVLQEQCKICAEAKQSRLPFTTIRTRAERYLQIIHTDICGPFEEKTHDGYRYVLTIMDDYSHFTKIYLLKNKSDAKAEIKNYIEETEREKNSKVSIIRCDNGGEYTSNDFKAFCQQKGIKLDYTVPYSPQLNGKAERLNRTLLEKTRALLFDSKLNKEMWGEAIYCATYILNRLPSDALKNKTPYEMWVGKKPNISNMQKFGSTVYAKQLHPNVKKLDPRSKKLIMIGYTNNGYRLWNDKERKIEISRDIVIVKSETEQKKENYKKINNNKSENDEKETTENQEETIENQEQIIEQQEETTEDTRTEDNKNDETFEDVVSETESEDTERERNRHHEENGYLRRSKRIKHIPIHLRDYSLLTYREAVTSKEGENWEKAINSEKESLKINNTWEIVDKKEAKDSKILTNKWVFRVKDNGTYKARLVVRGFEQNSIDYNEIYSPVVSQSTLKSLFALAASKDYNMMTFDVKTAFLYGELDENVYMNIPDDDGLALAKEKQTLKNILNCLEKEFEIKVYNDPTTFIGFEVKKTEKGITLKQESYIGNLLKKFSMEDSQPVNTPCNTENKTETQNTDSINFPYRELIGGLLYVSTRTRPDISQAVNEASRKIENPTKDDVIAAKKILKYLNGTRQKGIMYKKGGDMSKLNAYCDADYANCIKTRRSTTGFVIMLAEGPVLVFKTTTNRCIIIN
Summary
Uniprot
ProteinModelPortal
PDB
3S3N
E-value=3.06521e-09,
Score=151
Ontologies
GO
Topology
Length:
821
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.22592
Exp number, first 60 AAs:
0.00024
Total prob of N-in:
0.00016
outside
1 - 821
Population Genetic Test Statistics
Pi
475.090113
Theta
201.982968
Tajima's D
4.210261
CLR
0.283152
CSRT
0.99950002499875
Interpretation
Uncertain
