SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14795
Pre Gene Modal
BGIBMGA012212
Annotation
PREDICTED:_charged_multivesicular_body_protein_7_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.492 Nuclear   Reliability : 2.133
 

Sequence

CDS
ATGATTTTTTTTATTGCAGATAAGGAACCCGCAGACGATTTGGATAATGCGAAGCAATCGAAGCCCTGGTACCCGCGCTTTGAGGAGTGCCTTAAAACGGACGCGGCATGGCGGGACGCGGACGCCGCGCACGAGATACGAACCGACGATAGACTTCATCCGGGTCAGAAGCTGGATGTGGATTACACGAAGCCCCCTCGGCTGTACAACTCTGACTTCGCCGTGAAGGACCACCGACTGGAGGCCGGGGTGTGGCTCTACAACAGGCGAGACGCCGACGACTTCGCCTGCAGCACGGAGTTCTTTAGTTCCGAGAGTCCCGGGAAAGCTCCGGTCGGTGGCTTCCAAATGGCACCCGGGGGCGAGAGGAAGAAGTCACAGCTCTCGCCTGACGAGGAGACCCCGGACGAGGAATTGGAACGAAGATTGAAGAATCTAAGGGGCTTTAACTAG
Protein
MIFFIADKEPADDLDNAKQSKPWYPRFEECLKTDAAWRDADAAHEIRTDDRLHPGQKLDVDYTKPPRLYNSDFAVKDHRLEAGVWLYNRRDADDFACSTEFFSSESPGKAPVGGFQMAPGGERKKSQLSPDEETPDEELERRLKNLRGFN

Summary

Pfam
PF03357   Snf7
Interpro
IPR005024   Snf7_fam       

Ontologies

Topology

Length:
150
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05978
outside
1  -  150
 
 

Population Genetic Test Statistics

Pi
186.117149
Theta
126.090939
Tajima's D
1.401888
CLR
0.051531
CSRT
0.763561821908905
Interpretation
Uncertain
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