SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14790  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012221
Annotation
transferin_[Helicoverpa_armigera]
Full name
Transferrin      
Location in the cell
Extracellular   Reliability : 1.805 PlasmaMembrane   Reliability : 1.924
 

Sequence

CDS
ATGTTCGCGAAGCTTCTCATTCTATGCCTCGTGTTCGGCGCTAGCCGTGCCCAAAGTCATCGTGTGTGCATTTTGTCATCTTCATCGTCACTATGCCAGAGTTTAGACAAAGACGGGAGCCAGGCGACGTGCAGCAGAGTGGAAACTAGAATTGACTGCGCTTTGAGACTGGCCCGCGGAGAAGCGGACATTGGCTTCTTCACCGAGGAGGAGCTACTGTTATTATCACAGCAACAGCCAAACGACAATAGGGTCATCGCAACCGTCAGAGACGTCAGTAGATTGGAGACGTTCTCCTTCGAAGCTGTGGCTGTAGTTCCGAATAACCACACCGGAGGACTTGATGGGTTGCGTGGTGGTAGATATTGTCATCCCGGATTCGACCAGTCCGACCTGAGATGGTCCCCAAGAGTGCTCAAGACTTTGGAAGAAGTGGCCGCGCGCACCGACCGTTGCCCCGACGTGGACACGAACAGAAAAACGGCCGAGGAAATCGAAGTGGAAACATTAAGCTCCTTCTTCTCAGCTGCCTGCAGACCTGGGACCTGGAGTTCAAACTCTACAGTTGACGCCGACTTAAAAACGCGTTTCCCCTCTCTGTGCTCCCTATGCGGTGGGAGCTCCGGCTGCACAGGATACAGCATAGACATGGGCATCAGCGTCGCCGGAGTCAATAACCAGAACCGCCACATCCAGGCGTTGGAGTGCTTGAGGGTCAGCACGAATGACAGCGTCCCCACAGTGGCGTACGCGGCCTGGCTTCACGTCCGGAACTATTTTAATATCCGCAATCCACAAGACGCAGCCTCATTCTCCCTGCTGTGTCCGGATGGAACTCTTCAGGCGTTGACCCCTGAGATCTTGAGTAACCCTGTGGCACCTTGTTCGTTCGTGAAACAACCCTGGGGAGCTATTGTCGCGTCTACGGCTGCAGCTTCCACTGTCCTCACCAATCTCCAGGCCTGGTGGCCGACTGGAACTGATCCCGGAGCGAACTCTTGGCAGTCGGTATTGTTCAGCGGTCTCATTGGGGGCGCGAACGCGAGGGTTGTCTTCGAGCAAGCCCCCATTGCTCCAGCCAATTATACTGCTCCGATACGCAGCATTCCCGCTATAGACTCAACGGCGTCCTGTCTTCCGGCTCAACGCTGGTGTACCACGAACTTAAACGAGCAAACCAAGTGCTCTTGGGTTAGAGCATCAGCCTACACCCTCGGAATTCAGCCGGCAATCTCCTGTCAGCAGAGGAGCTCGGTCTTCGACTGCCTCACCGACATCAAGGAATCAAGAGCCGATTTTATTGCCACTCCCTCCAATTATGGATATATCGCAAGGCAACATTACCGCCTCTCGCCCGTGAAACTGGTTCAGAACACCAGATCTGGAGCGTCTCGGGTCGCGGCCTTCGTCAAGGAAACGGCCGCAGCGCAGGAGAACATCACGCGCTTCGAGAACCTTCGAGGAAAGAAGGCCTGCTTCCCAGAATTTGGAGGGCTTGCGTACGTCGCGTTCGTGCGCACCGCCCAGCTGCGGGGCGTGATCAGCGAGACAGAATGCGATTATGTGAAAGCTGTGGGAGAGTTTTTCGACGGCGCCTGCGCCCCGGGAGCATTGGACGCCTCTCACACCATCACGGAAACCACCTTCAACGCGACCTCGTTGTGTTCTGTATGCAGGCCACTCATCCCCACACCTGATAACTTTACCTGCGCTTATGATTATACGAACGTTTATTATGGCAACAACGGTACTCTAGCGTGTCTGAACGATCCGACCACGGACATCGCAGTGCTGAGCACGGAGAACATCAATGTTCACTTACAAGCGTTAGGACTGCAAGCCAATCAGTTCCGTGCCCTCTGTCAGAACAACACGCTCGCCGCGACGCCTGGCGTGTTCATTGACGACAACTGTCTCCTAGCTTACGTTGTCGACGCGGAGGTTCTGTCCAGAAGAGGCGACCCGCTGAACAACGCTTTGAACGTTTTATTCGATTCGCTGGACGCGTACTTCGGTTACAACACGGCGGCCGCGAACCAGCTCATCAATTTGGATTTGTTCTCGTCTTTCAACGGGATCAGCGATTTGTTGTTCAAGGACTCGACTATAGGCCTAACGGAGCCCACGGGCGAGGCTCCTCACGAACCCGCCAGGAACTACATGGAATTGTTCAGACACTTGGACGCGTGCAGCCGGGCGACCCCACAAGTGCCCGATATAGCGAACCGCGCCGCCTTCTCCGTTATAACGATGCTCGTTATGAGTTTCTTAACGAGATTTGTCGTTTATTAA
Protein
MFAKLLILCLVFGASRAQSHRVCILSSSSSLCQSLDKDGSQATCSRVETRIDCALRLARGEADIGFFTEEELLLLSQQQPNDNRVIATVRDVSRLETFSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQSDLRWSPRVLKTLEEVAARTDRCPDVDTNRKTAEEIEVETLSSFFSAACRPGTWSSNSTVDADLKTRFPSLCSLCGGSSGCTGYSIDMGISVAGVNNQNRHIQALECLRVSTNDSVPTVAYAAWLHVRNYFNIRNPQDAASFSLLCPDGTLQALTPEILSNPVAPCSFVKQPWGAIVASTAAASTVLTNLQAWWPTGTDPGANSWQSVLFSGLIGGANARVVFEQAPIAPANYTAPIRSIPAIDSTASCLPAQRWCTTNLNEQTKCSWVRASAYTLGIQPAISCQQRSSVFDCLTDIKESRADFIATPSNYGYIARQHYRLSPVKLVQNTRSGASRVAAFVKETAAAQENITRFENLRGKKACFPEFGGLAYVAFVRTAQLRGVISETECDYVKAVGEFFDGACAPGALDASHTITETTFNATSLCSVCRPLIPTPDNFTCAYDYTNVYYGNNGTLACLNDPTTDIAVLSTENINVHLQALGLQANQFRALCQNNTLAATPGVFIDDNCLLAYVVDAEVLSRRGDPLNNALNVLFDSLDAYFGYNTAAANQLINLDLFSSFNGISDLLFKDSTIGLTEPTGEAPHEPARNYMELFRHLDACSRATPQVPDIANRAAFSVITMLVMSFLTRFVVY

Summary

Description
Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.
Similarity
Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
Belongs to the transferrin family.
Feature
chain  Transferrin
EMBL
BABH01040835    BABH01040836    KC456662    AGZ62936.1    GDQN01000894    JAT90160.1    + More
GDQN01004606    JAT86448.1    KQ459580    KPI99233.1    KZ150499    PZC70669.1    ODYU01002337    SOQ39702.1    RSAL01000132    RVE46379.1    ODYU01001191    SOQ37063.1    GFDL01000282    JAV34763.1    GFDL01000267    JAV34778.1    GFDL01000284    JAV34761.1    AXCM01000254    CVRI01000047    CRK97686.1    ATLV01022347    KE525331    KFB47544.1    AAAB01008966    EAA12967.4    ADMH02000540    ETN66054.1    GAMD01001295    JAB00296.1    GL452135    EFN77822.1    AXCN02002114    KK107135    QOIP01000006    EZA58009.1    RLU21675.1    CH477781    EAT36265.1    ADTU01014841    KQ976662    KYM78568.1    APCN01001939    KQ981864    KYN34235.1    KQ979568    KYN20902.1    GL768221    EFZ11734.1    GBYB01011524    JAG81291.1    GL440813    EFN65396.1    NNAY01003269    OXU19707.1    UFQS01000099    UFQT01000099    SSW99518.1    SSX19898.1    AAZX01005059    AAZX01016347    SSW99516.1    SSX19896.1    KQ976780    KYN08345.1    GECU01028543    JAS79163.1    NEVH01005885    PNF38540.1    GL888818    EGI57911.1    UFQT01000715    SSX26709.1    SSX26708.1    KQ982314    KYQ57891.1    PYGN01000239    PSN50413.1    GECZ01009630    JAS60139.1    FX985455    BAX07468.1    GEZM01094052    JAV55971.1    GEZM01094051    JAV55972.1    GEZM01094049    JAV55974.1    GEZM01094050    JAV55973.1    AJWK01029837    PNF38542.1    GFDF01007655    JAV06429.1    GFDF01007657    JAV06427.1    GFDF01007656    JAV06428.1    GFDF01007658    JAV06426.1    GDKW01000354    JAI56241.1    GALX01004380    JAB64086.1    GBHO01021123    GDHC01021803    JAG22481.1    JAP96825.1    GBRD01006692    JAG59129.1    GFTR01007857    JAW08569.1    PNF38541.1    AJWK01005316    KQ971308    KYB29544.1    KYB29543.1    ACPB03017612    LJIG01009362    KRT83232.1    KK852636    KDR19744.1    KY653081    ATU47275.1    PNF38525.1    AF535146    AAN03488.1    PNF38524.1    GL732530    EFX86336.1    KYB29545.1   
Pfam
PF00405   Transferrin        + More
PF00858   ASC
PF00246   Peptidase_M14
PF14726   RTTN_N
PF07528   DZF
PF11931   DUF3449
PF16837   SF3A3
PF12108   SF3a60_bindingd
Interpro
IPR001156   Transferrin-like_dom        + More
IPR001873   ENaC       
IPR016357   Transferrin       
IPR034223   IGCP-like_CPD       
IPR000834   Peptidase_M14       
IPR029249   Rotatin_N       
IPR030791   Rotatin       
IPR006561   DZF_dom       
IPR006116   2-5-oligoadenylate_synth_N       
IPR000690   Matrin/U1-C_Znf_C2H2       
IPR031774   SF3A3_dom       
IPR024598   DUF3449       
IPR031776   SF3A3       
IPR021966   SF3a60_bindingd       
IPR018195   Transferrin_Fe_BS       
PDB
1JW1     E-value=1.64534e-17,     Score=222

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.995356
 
 
Length:
763
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
8.49233
Exp number, first 60 AAs:
0.00285
Total prob of N-in:
0.00032
outside
1  -  763
 
 

Population Genetic Test Statistics

Pi
221.667529
Theta
151.769522
Tajima's D
1.548414
CLR
0.184594
CSRT
0.797910104494775
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 TLEEVAAR 100.00 2e-19
28556443 DSTIGLTEPTGEAPHEPAR 100.00 7e-07
28556443 DSTIGLTEPTGEAPHEPAR 100.00 7e-07
28556443 ASAYTLGIQPAISCQQR 100.00 7e-07
28556443 ASAYTLGIQPAISCQQR 100.00 7e-07
28556443 SSVFDCLTDIK 100.00 2e-05
28556443 SSVFDCLTDIK 100.00 2e-05
28556443 ADFIATPSNYGYIAR 100.00 7e-05
28556443 ADFIATPSNYGYIAR 100.00 7e-05
28556443 NYMELFR 100.00 3e-04
28556443 GVISETECDYVK 100.00 3e-04
28556443 SIPAIDSTASCLPAQR 100.00 8e-04
28556443 SIPAIDSTASCLPAQR 100.00 8e-04
28556443 SIDMGISVAGVNNQNR 100.00 8e-04
28556443 SIDMGISVAGVNNQNR 100.00 8e-04
24402669 ADEISQQTQTNFDKIEDIGQQTQK 100.00 0.001
28556443 ADFIATPSNYGYIAR 100.00 0.001
28556443 ADFIATPSNYGYIAR 100.00 0.001
28556443 ACFPEFGGLAY 100.00 0.001
28556443 ADFIATPSNYGY 100.00 0.001
28556443 YCHPGFDQSDLR 100.00 0.002
28556443 WCTTNLNEQTK 100.00 0.002
28556443 WCTTNLNEQTK 100.00 0.002
28556443 TLGIQPAISCQQR 100.00 0.005
28556443 ASAYTLGIQPA 100.00 0.032
24402669 TDPYMCSPHASCIK 100.00 0.048
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号