SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14789
Pre Gene Modal
BGIBMGA012218
Annotation
PREDICTED:_probable_C-mannosyltransferase_DPY19L1_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.351
 

Sequence

CDS
ATGGGTGTTCTCATGGGGGACTGGGGAAAGATGAACCAAAAGAGCGTCAACAGACTGAGAGAACAGGGTCCAGTCCGCCTTCGACAAATTAAATTTAAGTCGAGGGTTGCGAGGAGGGAGTATATAATTAGAGGAGTCAGGAAAGGACATAAGGATGGGGAAATGATCACTACCATGCGTATTGCACAGCGTAAGCCATTTAACATTAAAATGGAGGAAAATACTGTTGCAGTTGAAAAAGTTGTGAAACAAAAAAGTTTTCCTAAGAATAAGTTCCTATTTAGCATCACAATCGTTTCTATCGCAACTCTAGTCGGCTACGTTCACTACCGTTACGTTTCCCATCTCTTTGAGAATGACAGGAACTTTGCATACCTCTCTGAGCTGGAGAGGGAGATGTCATTCCGTACCGAAATGGGTTTCTATTACTCTTATTACAAAACACTGGTTCATGAGAAGCCATTTGTAGCTGGGATATCTAAATTGATGTTCGACAAGAGTGTGGAGCATCCAAAAGAAGTGAATGCATTCAATCGATTTAATATACATCCTGAGGTATTGATTGCAGCATTGTACCGATACTTTGAGGTTTGGCTCAACACAACCGAGCACAGACAATGCCACATTATAGACAGAGGGCACGATTTGAGTCCGGTTGAGAGCTGCGTCGGCCTGGGTCAGCCAATCTACTTTTATCTTGAGGCCATCTGGTTGTTAGCCGGTTTAAATGTGACCGCATTGTTTTTACATGCTACAGCATTGAGTAACAGCATATTGGGAGGGATCTTCACTGTGATGCAATATTTTGCGAATCACAGCGAATGCACTAGAGTAATGTGGGCACCAAACGAGAGGGAGAACATGGCCGGTCCCCTGCTGATCCTGCAATGCTGGCTGGTCAGCATGCAGCTAAGGGATAGAGAGAGAAAATCCACGTTTCCACTCCAGATCTCGATATTTCTATTGAACTGTCTCTGCTTACTATGCTGGCAGTTCACCCAGTTCATATTCCTGACTCAGACCGCCATATTCTTCGTAATGGAACAGATAAGGGTGATCGACACGAAGACATTGTGTGTTCTCCTGCATTCACACTTCTGCGGGCTCCACACCGCTATACTGTTACTTCAGGGCAACGACATGCTAAAATCGTCCTTATACGCATCGTTCTTCGCGGTCGTTTCGGTTTACGCTCTACTCTTCAGCTCGTTTAGGCTTAAGGTCGAGAATCGCTTGGACGTGTTCGTCGAGGCGTGGCTAGTGCTGTTGAGGTTATCGATAGTGACGTGCCTCTCTGTGTACTTGAAGAGCGCGATCGGGGATTTCTTCGAGATGAAAGAGGACGGTCACGTATGGGAGCTTCTCGCCTCAAAGCTCACCGACTACAAGAGCTTTCACACTATGATCTATACTTGTTCCGAGGTTTTCGATTTTTTGCCCCTCGGCAGTTTCGTTCGTTCGGTAGGGGGCGCTTTGCTGCCGAGCGCCCTGACCGCGATCGCTTTGGCCACTAATTACACGATAAAAGAAACTCGATCGAAAATCGAACGGAAAATCGATAAGGAAATCGATGTTAATTCGGACGACGGCAGCGATAGTGGTATCGATAGTTCAGACGTTAAGACAAAGAAGTCGGGCGTTACGATAAAAGAAGAAGAAAGGGATAGCGATATCGATGAGATCAGAGATGGGTTGGTCCGTTACGTGAAGGGCTTGTCAATAGATCCGGCGGTATGTTACAATCTGATGCAGTTGGTCGCTTACGGCCTCATGGCCGGTCTGGTTATGAGGCTGAAGCTGCTATTTGTGCCTCAACTATGCATAATCTCATCGCTGCTGTTCAACACCGAGTACCACAGATACACAAAACCATATTATTTGAAATACGTAATAATCATATGCAATATATGGTCTTTGGTGAATACTATGTATTTGAATGTGACGAAGGAATTGTCGCACATAGGTGAATTCAGTGATCCGCCCTTAGAGGAGTTGCTGAATTGGATAATGAGGGAGACATCGCCGAGCGCGGCTTTCGCGGGCTCGATGCCGCTGCTAGCGACTGTGCTGCTGTCCACACGCCGACCTGTAGTCGCGCACCCGCACTACGAACACTACGAGGCCAGAGAACGCGCCTATTCTGTCTATAAAATGTACGGGCGTTTCTCAGCCGAGGAGATCTATGAGGAGCTGAATAAATTGAAAGTGACGTATGTCGTTGTGGAAACAAAATACTGCTACGGAAGGAGCAACCATTTAGAGTTTAAAATGATGGAGTGA
Protein
MGVLMGDWGKMNQKSVNRLREQGPVRLRQIKFKSRVARREYIIRGVRKGHKDGEMITTMRIAQRKPFNIKMEENTVAVEKVVKQKSFPKNKFLFSITIVSIATLVGYVHYRYVSHLFENDRNFAYLSELEREMSFRTEMGFYYSYYKTLVHEKPFVAGISKLMFDKSVEHPKEVNAFNRFNIHPEVLIAALYRYFEVWLNTTEHRQCHIIDRGHDLSPVESCVGLGQPIYFYLEAIWLLAGLNVTALFLHATALSNSILGGIFTVMQYFANHSECTRVMWAPNERENMAGPLLILQCWLVSMQLRDRERKSTFPLQISIFLLNCLCLLCWQFTQFIFLTQTAIFFVMEQIRVIDTKTLCVLLHSHFCGLHTAILLLQGNDMLKSSLYASFFAVVSVYALLFSSFRLKVENRLDVFVEAWLVLLRLSIVTCLSVYLKSAIGDFFEMKEDGHVWELLASKLTDYKSFHTMIYTCSEVFDFLPLGSFVRSVGGALLPSALTAIALATNYTIKETRSKIERKIDKEIDVNSDDGSDSGIDSSDVKTKKSGVTIKEEERDSDIDEIRDGLVRYVKGLSIDPAVCYNLMQLVAYGLMAGLVMRLKLLFVPQLCIISSLLFNTEYHRYTKPYYLKYVIIICNIWSLVNTMYLNVTKELSHIGEFSDPPLEELLNWIMRETSPSAAFAGSMPLLATVLLSTRRPVVAHPHYEHYEARERAYSVYKMYGRFSAEEIYEELNKLKVTYVVVETKYCYGRSNHLEFKMME

Summary

EMBL
BABH01040837    BABH01040838    BABH01040839    BABH01040840    BABH01040841    NWSH01002862    + More
PCG67423.1    ODYU01002408    SOQ39847.1    GDQN01000837    JAT90217.1    RSAL01000072    RVE49065.1    KQ460246    KPJ16375.1    KQ459580    KPI99228.1    KK852473    KDR23145.1    GDIP01050900    JAM52815.1    GDIP01169813    JAJ53589.1    GDIP01193537    JAJ29865.1    LRGB01000966    KZS14349.1    GDIQ01006321    JAN88416.1    GDIP01169812    JAJ53590.1    GL732600    EFX72333.1    AERX01023998    AERX01023999    PYGN01000124    PSN53497.1    GCES01039750    JAR46573.1    AL935296    AFYH01162944    AFYH01162945    AFYH01162946    AFYH01162947    AFYH01162948    AFYH01162949    AFYH01162950    AFYH01162951    AFYH01162952    AFYH01162953    NOWV01000109    RDD40199.1    CM004466    OCT99930.1    HADW01001026    HADX01005258    SBP27490.1    BC163516    BC163534    AY648728    AAI63516.1    AAT68046.1    AYCK01013216    AYCK01013217    HAEI01008337    SBS04746.1    HADY01010152    SBP48637.1    HAEB01007270    HAEC01011455    SBQ79672.1    HADZ01017817    SBP81758.1    HAEH01003675    SBR71877.1    HAEJ01008072    SBS48529.1    GCES01005928    JAR80395.1    HAED01009484    HAEE01006336    SBQ95696.1    HACA01023847    CDW41208.1    HAEA01004330    SBQ32810.1    GDRN01065697    JAI64653.1    HAEF01008036    HAEG01013199    SBR45837.1    KB199806    ESP04314.1    HACA01023846    CDW41207.1    CP026258    AWP15703.1    JW864783    AFO97300.1    GG666577    EEN52845.1    RJVU01051648    ROL41368.1    AABR07069506    JH166119    EHA98448.1    NHOQ01000085    PWA33139.1    AAGJ04001253    AAGJ04001254    AAGJ04001255    GL379834    EGT51533.1    GFWV01013972    MAA38701.1    GCES01129007    JAQ57315.1    GCES01039751    JAR46572.1    DS235317    EEB14644.1    GDIQ01211402    JAK40323.1    ABKE03000122    PDM62802.1    GCES01039752    JAR46571.1    ABQF01014269    ABQF01014270   
Pfam
PF10034   Dpy19        + More
PF00069   Pkinase
Interpro
IPR018732   Dpy-19/Dpy-19-like        + More
IPR030038   Dpy-19       
IPR030041   DPY19L1       
IPR000719   Prot_kinase_dom       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
SUPFAM
SSF56112   SSF56112       

Ontologies

Topology

Length:
759
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
193.43479
Exp number, first 60 AAs:
0
Total prob of N-in:
0.62839
inside
1  -  91
TMhelix
92  -  114
outside
115  -  235
TMhelix
236  -  258
inside
259  -  314
TMhelix
315  -  337
outside
338  -  383
TMhelix
384  -  406
inside
407  -  417
TMhelix
418  -  440
outside
441  -  485
TMhelix
486  -  508
inside
509  -  624
TMhelix
625  -  647
outside
648  -  759
 
 

Population Genetic Test Statistics

Pi
297.381316
Theta
192.062103
Tajima's D
1.663546
CLR
0.219962
CSRT
0.818109094545273
Interpretation
Uncertain
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