SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14788  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012217
Annotation
hemolymph_protein_14_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 4.103
 

Sequence

CDS
ATGTCCAGATGCCAGAGCAATTGGTTCCGCTGTACGTATGGCGCGTGCGTGGATGGTACGGCGCCCTGCAACGGAATCCAGGAGTGCGCCGATAACTCTGATGAGCTGCTACCTCAGTGTCGGGGGAATGAGGTCGCGGACGCGACGAACTTGAGAGACAAGTTCAAGTGTGCTGACGGTAACGTTATACCGGCCACCGCGTTCTGTGACGGCGTAGCCGACTGCCCGGACGGGTCTGACGAGACGGTCCAGGCGTGCGCGGGCAGGACGTGCCCGGCGTACTTGTTCCAGTGCGCGTATGGAGCTTGCGTAGACGCCGGATCAGACTGTAACGGGATAAAAGAATGCGCTGACGGCTCGGATGAGTCGGACGAGCTCTGTGATAGAGTCCTGTCCGGGAAGCCGACGCAAAAGCCTTCAGCATCAGGCGGATGCGTCCTGCCCCAGTACCCAGCTCACGGCTCGTACGTGGTCCTGAACACGCCGAACGCTACTCCCGGCCAGACCTTCGACTCGATCCAAGTGAACGTGACCTGCAAGCCGGGGTACGGCGTGATGGGCAGGAACGACGTCTTCTGCTTGAACGGGTGGTGGTCGGACAAGCTGCCTCAGTGCGTCCGTTTCTGCACGCTCAACAGTCATGCTAGCGTCGAGTACAAATGTCTGCTCACCAATGGTAACGAGGGTACCAGACCCTGCGGCTCCCTGGAGCCGACCGGCACAATAGTCCAGCCGCAGTGCAGGTCCCCCAACTATTACTCGACCGTGCCGCTCGGCTACATGCGGTGCATCGAGGGGAACTGGGACTACGTGGCCACATGCACTCCAGAATGCGGCAGAGTCACGCCTGACGGTGAAGAGTTGGTGTTCGGCGGGAGATCAGCGAAAAGAGGAGAACTACCCTGGCATGCTGGCATATATAGGAAGACTAGCACACCGTACATGCAGATCTGCGGTGGATCTCTCGTTAGCACCACCGTCGTCATATCAGCCGCTCACTGCTTCTGGAGCAACCTCAACCAGCAGCTACCCACAACTGACTATGCCGTTGCCGTCGGTAAGATTTACAGACCCTGGAACAATCCGAAGGACTTGGACGTCCAGAAATCGGATGTGAGGGATATAAAAATCCCGATAAGATTCCAAGGGAGGACGGCGAACTTTCAAGAGGACATAGCGATCGTGATACTGGCGACAAGGATCGAGTACCGCACCTACGTCAGGCCGGCCTGTCTGGACTTCGACATCAGCTTTGAGAGGCAGCAACTACAAGACGGGAAACCGGGCAAGGTGGCCGGTTGGGGTTTGACTTCGGAAAACGGCAACGCCTCGCAAATACTGAAAGTCGTTGATTTGCCATACATCGACATAGATAGGTGCATCGGCATGGCGCCTCCCGGGTTCAGGGAGTACATTAATGGCGACAAGATCTGCGCTGGCGACGGAGAAGGCAAAGCTTTATGCAAAGGGGACAGCGGCGGGGGCCTAGCTTTTTCCACTTACGACAAGGGAGTCGAAAGATACTATTTACGCGGAATCGTGTCAACGGCTTCGACGAACGAGAATCTGTGCAACACAAACACATTCACAACATTCACACAAGTCTCGAAACACGAACATTTCATCAAGCAATATCTGCACGTGGTTCAGACTTAG
Protein
MSRCQSNWFRCTYGACVDGTAPCNGIQECADNSDELLPQCRGNEVADATNLRDKFKCADGNVIPATAFCDGVADCPDGSDETVQACAGRTCPAYLFQCAYGACVDAGSDCNGIKECADGSDESDELCDRVLSGKPTQKPSASGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQCVRFCTLNSHASVEYKCLLTNGNEGTRPCGSLEPTGTIVQPQCRSPNYYSTVPLGYMRCIEGNWDYVATCTPECGRVTPDGEELVFGGRSAKRGELPWHAGIYRKTSTPYMQICGGSLVSTTVVISAAHCFWSNLNQQLPTTDYAVAVGKIYRPWNNPKDLDVQKSDVRDIKIPIRFQGRTANFQEDIAIVILATRIEYRTYVRPACLDFDISFERQQLQDGKPGKVAGWGLTSENGNASQILKVVDLPYIDIDRCIGMAPPGFREYINGDKICAGDGEGKALCKGDSGGGLAFSTYDKGVERYYLRGIVSTASTNENLCNTNTFTTFTQVSKHEHFIKQYLHVVQT

Summary

Similarity
Belongs to the peptidase S1 family.
Belongs to the mitochondrial carrier (TC 2.A.29) family.
EMBL
JQ954757    AFK93534.1    ODYU01002842    SOQ40824.1    AY380790    AAR29602.1    + More
KZ150174    PZC72580.1    NWSH01003130    PCG66903.1    NWSH01002430    PCG68315.1    NWSH01000454    PCG76303.1    AY829818    AAV91432.2    KQ459580    KPI99230.1    KQ460246    KPJ16373.1    KZ150237    PZC71960.1    KQ460735    KPJ12635.1    KPI99211.1    KPJ12638.1    RSAL01000132    RVE46370.1    ODYU01003240    SOQ41738.1    KPJ12637.1    PYGN01000456    PSN46002.1    JTDY01001173    KOB74658.1    NEVH01005885    PNF38537.1    KK852636    KDR19731.1    AXCM01003686    AXCN02000208    KPJ16374.1    GANO01004615    JAB55256.1    GFDL01006237    JAV28808.1    JXUM01056539    JXUM01056540    KQ561915    KXJ77171.1    CH477252    EAT46012.1    DS232317    EDS39906.1    GGFK01006544    MBW39865.1    GGFK01006333    MBW39654.1    ADMH02001351    ETN62915.1    JXUM01028537    KQ560824    KXJ80737.1    APCN01005945    AAAB01008987    EAA01121.5    GGFJ01003008    MBW52149.1    GGFJ01003009    MBW52150.1    GBHO01011848    GBHO01011846    GBRD01011126    JAG31756.1    JAG31758.1    JAG54698.1    GDHC01007812    JAQ10817.1    GFTR01007569    JAW08857.1    ACPB03011663    KY031267    ATU83018.1    KQ971311    EEZ99332.2    AB363982    BAG14264.1    GEZM01049076    JAV76122.1    EEZ98916.1    GEMB01002039    JAS01140.1    GEZM01049075    JAV76123.1    ATLV01017677    ATLV01017678    ATLV01017679    KE525181    KFB42386.1    PCG68316.1    FX985348    BAX07361.1    ABLF02017553    KQ434887    KZC10211.1    GFDF01005380    JAV08704.1    CVRI01000063    CRL04521.1    KQ765323    KQ759877    OAD53988.1    OAD62273.1    APGK01017806    APGK01017807    APGK01017808    KB740053    ENN81797.1    KB632093    ERL88690.1    KZ288195    PBC33792.1    GEDC01004111    JAS33187.1    ABLF02038724    ABLF02038736    KQ414599    KOC69793.1    GDHC01009430    JAQ09199.1    CCAG010010748    CCAG010010749    CCAG010010750    CCAG010010751   
Pfam
PF00084   Sushi        + More
PF00057   Ldl_recept_a
PF00089   Trypsin
PF00153   Mito_carr
PF00004   AAA
PF01416   PseudoU_synth_1
PF00439   Bromodomain
Interpro
IPR023415   LDLR_class-A_CS        + More
IPR000436   Sushi_SCR_CCP_dom       
IPR018114   TRYPSIN_HIS       
IPR001254   Trypsin_dom       
IPR009003   Peptidase_S1_PA       
IPR002172   LDrepeatLR_classA_rpt       
IPR036055   LDL_receptor-like_sf       
IPR035976   Sushi/SCR/CCP_sf       
IPR001314   Peptidase_S1A       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR013032   EGF-like_CS       
IPR000742   EGF-like_dom       
IPR001879   GPCR_2_extracellular_dom       
IPR003593   AAA+_ATPase       
IPR001487   Bromodomain       
IPR020095   PsdUridine_synth_TruA_C       
IPR003959   ATPase_AAA_core       
IPR020103   PsdUridine_synth_cat_dom_sf       
IPR036427   Bromodomain-like_sf       
IPR001406   PsdUridine_synth_TruA       
IPR020097   PsdUridine_synth_TruA_a/b_dom       
IPR041708   PUS1/PUS2-like       
IPR027417   P-loop_NTPase       
IPR003960   ATPase_AAA_CS       
IPR033116   TRYPSIN_SER       
SUPFAM
SSF50494   SSF50494        + More
SSF57535   SSF57535       
SSF57424   SSF57424       
SSF103506   SSF103506       
SSF55120   SSF55120       
SSF47370   SSF47370       
SSF52540   SSF52540       
PDB
4IGD     E-value=2.25354e-22,     Score=262

Ontologies

Topology

Length:
551
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.4177
Exp number, first 60 AAs:
0.0002
Total prob of N-in:
0.01991
outside
1  -  551
 
 

Population Genetic Test Statistics

Pi
248.187166
Theta
154.522514
Tajima's D
1.804845
CLR
0
CSRT
0.846857657117144
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 CIEEVGIDPESYR 100.00 5e-07
29197581 GNEVADATNIRDK 100.00 5e-07
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