Gene

KWMTBOMO14786

Annotation

endonuclease-reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr24(-):15080754-15081195      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.294

CDS

ATGAGAACCAATGTCTCCATCCTCGAAGAGCTGAAGGTCACCAAGCGCCTGCTGACTATGTGCCAGGAAAGGATCCGGAGTTTCTTTGGGCACATAATGCGATCCTCATTGCACAGCCTGGAGAAACTCACAATTCTCGGACAGATGGAGGGGAAGCGCGCTAGAGGAAGAGCGCCAGCTAGATGGGTTGACCAACTCAAGGAGGTGACTGGAGGCCAGATATGGGGAGCGGTACATATGGCGCAGAACCGGACCGAGTGGAGAAGATTGACATACAGTCACGATCCTCCTCAGCATTGA

Protein

MRTNVSILEELKVTKRLLTMCQERIRSFFGHIMRSSLHSLEKLTILGQMEGKRARGRAPARWVDQLKEVTGGQIWGAVHMAQNRTEWRRLTYSHDPPQH

Similarity

Belongs to the UDP-glycosyltransferase family.

Uniprot

A0A2W1BGD9   D5LB39   D7F174   A0A3S2L0R7   A0A2H1VU13   D7F163   + More
A0A2W1B3R1   A0A2H1V742   A0A2H1VNK5   D7F161   S4NYG9   D7F162   D7F175   A0A2H1W7G4   A0A194PHS9   D7F172   D7F167   A0A2W1BHL0   W4Y921   H2YWZ5   X1D4L4   H2YWZ6   A0A2W1BLZ6   A0A0N1IJY3   W4YPU3   A0A0J7JU58   A0A2G8K796   H3B2Y3   A0A2G8K183   A0A0N1I2R8   A0A2G8K327   A0A2G8KTJ4   A0A2G8JVI4   A0A2G8JE23   A0A2G8JVA1   A0A2G8LJK7   A0A2G8L6P4   W4Z831   A0A212F3L8   A0A3S1HJZ0   A0A3S0ZU31   A0A085NA37   A0A3S1AY56   A0A183FRG3   A0A3P8CJY9   A0A0P4W0B7   D5LB38   A0A2S2NMQ2   A0A183FFT0   A0A3P7XWD0   A0A3S3NR17   A0A0A9VZT6   A0A3S3RLW1   W4ZFR8   W5NMM5   A0A3S3P648   A0A3S1AYP8   A0A2W1BN03   A0A183F5Q6   A0A3P7TFN0   A0A151IIH7   A0A3S1AZH6   W4XV24   W4ZJA4   A0A085LZ21   A0A2W1BM48   A0A146L0Z1   A0A2A4J795   W5NAB6   A0A3S0ZE77   J9LTW9   W4Z5A1   A0A2G9TUJ2   A0A2W1BR99   A0A085N9X5  

Pubmed

28756777    20470440    23622113    26354079    24624126    29023486    + More
9215903    22118469    24929829    25401762    26823975   

EMBL

KZ150203    PZC72267.1    GU815090    ADF18553.1    FJ265559    ADI61827.1    + More
RSAL01000289    RVE42931.1    ODYU01004401    SOQ44236.1    FJ265548    ADI61816.1    KZ150366    PZC71172.1    ODYU01001007    SOQ36619.1    ODYU01003523    SOQ42419.1    FJ265546    ADI61814.1    GAIX01008594    JAA83966.1    FJ265547    ADI61815.1    FJ265560    ADI61828.1    ODYU01006805    SOQ48998.1    KQ459603    KPI92872.1    FJ265557    ADI61825.1    FJ265552    ADI61820.1    KZ150087    PZC73751.1    AAGJ04161766    BART01031562    GAH15691.1    KZ150088    PZC73730.1    LADJ01058192    KPJ21589.1    AAGJ04055194    LBMM01032604    KMQ81702.1    MRZV01000817    PIK43880.1    AFYH01119920    MRZV01000994    PIK41715.1    KQ459547    KPJ00048.1    MRZV01000940    PIK42365.1    MRZV01000378    PIK51329.1    MRZV01001207    PIK39730.1    MRZV01002322    PIK33998.1    MRZV01001216    PIK39650.1    MRZV01000056    PIK60437.1    MRZV01000196    PIK55924.1    AAGJ04154883    AGBW02010540    OWR48330.1    RQTK01000360    RUS81011.1    RQTK01000752    RUS75316.1    KL363266    KL367526    KFD49675.1    KFD66333.1    RQTK01001448    RUS70261.1    UZAH01026759    VDO85005.1    GDRN01098129    JAI59014.1    GU815089    ADF18552.1    GGMR01005851    MBY18470.1    UZAH01025466    VDO64497.1    NCKU01012182    RWS00163.1    GBHO01041897    JAG01707.1    NCKU01008836    RWS01655.1    AAGJ04055057    AHAT01022938    NCKU01004395    RWS06003.1    RQTK01001364    RUS70632.1    KZ150034    PZC74657.1    UZAH01001657    VDO19881.1    KQ977522    KYN02133.1    RQTK01000685    RUS76136.1    AAGJ04068581    AAGJ04021158    KL363256    KL367985    KFD50217.1    KFD59415.1    KZ150032    PZC74715.1    GDHC01017214    JAQ01415.1    NWSH01002736    PCG67606.1    AHAT01015554    RQTK01000625    RUS76894.1    ABLF02023718    AAGJ04128321    KZ353189    PIO61683.1    KZ150002    PZC75290.1    KFD49622.1    KFD66271.1   

Proteomes

UP000283053    UP000053268    UP000007110    UP000007875    UP000053240    UP000036403    + More
UP000230750    UP000008672    UP000007151    UP000271974    UP000050761    UP000285301    UP000018468    UP000078542    UP000218220    UP000007819   

PRIDE

D5LB39    D7F174    D7F163    D7F161    D7F162    D7F175    + More
D7F172    D7F167    D5LB38   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF05699   Dimer_Tnp_hAT
PF00201   UDPGT
PF00351   Biopterin_H

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR000477   RT_dom       
IPR005135   Endo/exonuclease/phosphatase       
IPR008906   HATC_C_dom       
IPR027124   Swc5/CFDP2       
IPR002213   UDP_glucos_trans       
IPR035595   UDP_glycos_trans_CS       
IPR000637   HMGI/Y_DNA-bd_CS       
IPR019774   Aromatic-AA_hydroxylase_C       
IPR036951   ArAA_hydroxylase_sf       
IPR036329   Aro-AA_hydroxylase_C_sf       
IPR001273   ArAA_hydroxylase       

SUPFAM

SSF56219   SSF56219        + More
SSF56534   SSF56534       

Gene 3D

3.60.10.10     1.10.800.10    

ProteinModelPortal

A0A2W1BGD9   D5LB39   D7F174   A0A3S2L0R7   A0A2H1VU13   D7F163   + More
A0A2W1B3R1   A0A2H1V742   A0A2H1VNK5   D7F161   S4NYG9   D7F162   D7F175   A0A2H1W7G4   A0A194PHS9   D7F172   D7F167   A0A2W1BHL0   W4Y921   H2YWZ5   X1D4L4   H2YWZ6   A0A2W1BLZ6   A0A0N1IJY3   W4YPU3   A0A0J7JU58   A0A2G8K796   H3B2Y3   A0A2G8K183   A0A0N1I2R8   A0A2G8K327   A0A2G8KTJ4   A0A2G8JVI4   A0A2G8JE23   A0A2G8JVA1   A0A2G8LJK7   A0A2G8L6P4   W4Z831   A0A212F3L8   A0A3S1HJZ0   A0A3S0ZU31   A0A085NA37   A0A3S1AY56   A0A183FRG3   A0A3P8CJY9   A0A0P4W0B7   D5LB38   A0A2S2NMQ2   A0A183FFT0   A0A3P7XWD0   A0A3S3NR17   A0A0A9VZT6   A0A3S3RLW1   W4ZFR8   W5NMM5   A0A3S3P648   A0A3S1AYP8   A0A2W1BN03   A0A183F5Q6   A0A3P7TFN0   A0A151IIH7   A0A3S1AZH6   W4XV24   W4ZJA4   A0A085LZ21   A0A2W1BM48   A0A146L0Z1   A0A2A4J795   W5NAB6   A0A3S0ZE77   J9LTW9   W4Z5A1   A0A2G9TUJ2   A0A2W1BR99   A0A085N9X5  

KEGG

NA   

GO

GO:0004519   GO:0003964   GO:0016021   GO:0046983   GO:0016758   GO:0006355   GO:0005506   GO:0016714   GO:0009072  

PANTHER

PTHR23227   PTHR11473  

Length:

99

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0014

Exp number, first 60 AAs:

0.0012

Total prob of N-in:

0.27104

outside

1  -  99

 

 

Pi

193.274156

Theta

152.067946

Tajima's D

0.851874

CLR

0.266964

CSRT

0.618369081545923

Interpretation

Uncertain