Gene

KWMTBOMO14776

Pre Gene Modal

BGIBMGA003804

Annotation

PREDICTED:_caltractin-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr24(-):14904966-14909696      View in EpiBrowser

Full name

Caltractin       + More
Centrin-1      

Alternative Name

Centrin

Location in the cell

Cytoplasmic   Reliability : 3.715

CDS

ATGGAGGAAACTGTAGTTTCCGGAACAATCGCTTATTCCAATAGCGAAGAGGATTTGAACCAGTCGTCTAAAGTAAATGAAATAAAAGCTAAATTGACCTTAACGAACGCACAGGAGCAAGATCTACGCGAGGCATTCAACCTTCTAGACTATACAGGAGAAGGGAAAATAAGAGCCGAGGATTTTCGTGTTGCCATCAAAGCATTAGGTTACGAGCCAACTAACGAGGAGCTGCAGACAATGATAAGAGCGGTGGACAAAGGAGACACCGGGAAATTGAGCTTCGAAAATTTCGAAACGGCCATAATGAGAAAGATCATGGCCCTGGACAGCGACGGCGATATCATGAAGAGCTTCCGACTCTTCGATGACGATGACAGTGGTTTCATAAATTTCGAAAACGTCAAGAAAGTATCTCAAATATTAGGTACTTATTTAACGGACGAGGAGATTGAAGAAATGATTGACGATGCCGATAAAGATTTCGACGGACTGATATCGGTCGAAGAATTTATGAAAATGATAAAAAATAGTGTTCACATAGAAACTCTGTAG

Protein

MEETVVSGTIAYSNSEEDLNQSSKVNEIKAKLTLTNAQEQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDTGKLSFENFETAIMRKIMALDSDGDIMKSFRLFDDDDSGFINFENVKKVSQILGTYLTDEEIEEMIDDADKDFDGLISVEEFMKMIKNSVHIETL

Description

Plays a fundamental role in microtubule-organizing center structure and function (By similarity). Plays a role in sperm cilia formation (By similarity).

Subunit

Monomer.
Monomer (By similarity). Interacts with PIFO (By similarity).

Miscellaneous

Binds two moles of calcium per mole of protein.

Similarity

Belongs to the centrin family.

Keywords

Calcium   Cell cycle   Cell division   Cytoplasm   Cytoskeleton   Metal-binding   Mitosis   Repeat   Complete proteome   Reference proteome  

Feature

chain  Caltractin

Uniprot

H9J2R7   A0A3S2NEJ9   A0A2W1BIZ1   A0A2A4J3V5   A0A0N1IIH0   A0A212FBI6   + More
A0A194Q1M2   G5BTS6   U4UUI5   D2A0V1   H0W010   N6UKA8   A0A3B3BNH9   A0A1Y1JWA6   D2VXQ7   P53441   Q179F4   A0A182H2A0   A0A091D4T8   H2LPJ9   A0A3P9IVJ7   A0A3Q3A0T6   A0A1A7YRH1   A0A3B4E3C3   A0A2I4B191   A0A2Y9IW44   A0A3P4S490   A0A384AWK4   Q28HC5   A0A3B4ZXH9   A0A026W4I8   M3WB11   A0A2I4B175   A0A0A0A700   A0A091WF35   W5L4P9   A0A091X492   A0A1Q3FEH8   B0WFF6   A0A2Y9GRJ1   A0A2U3WPZ7   A0A093NCW4   A0A087QQR1   A0A2F0BEU9   A0A3B4EPF0   Q5XHJ4   A0A384C1L3   A0A3Q7UT25   A0A3Q7Q9Q9   Q91643   A0A3Q4HLF1   A0A3Q2W9H1   A0A3B4E3B4   I3L7N8   T1J1R6   A0A093GYM0   F6R406   Q4R3S0   A0A1W4WIG3   F6Z9R8   A0A1B6CM56   A0A091TFE1   A0A091NJT5   A0A099ZUF2   A0A0D9SB69   A0A2U9C7S6   G3QG53   A0A2K6JRR3   A0A0R4IVN1   A0A1B6JQD8   A0A2R9AQL0   A0A2K6JQ77   A0A2K6NM19   Q4SJS6   A5A3G2   H2NW00   A0A2K5XR76   A0A096N013   A0A2K5KWD4   A0A091KIP0   A0A147B5N1   A0A2K6JRP5   A0A2K6NYZ5   A0A2K5HSP1   A0A094KU40   H3CU91   A0A091IDW2   A0A3N0YN57   A0A091Q9J0   G3U355   A0A2Y9E9Y2   L8IF28   Q32LE3   F6RHT8   A0A0D9R3S7   A0A2K5LE64   F7HKU5   A0A3Q2EJH6   A0A3Q4B1G0  

Pubmed

19121390    28756777    26354079    22118469    21993625    23537049    + More
18362917    19820115    21993624    29451363    28004739    20211133    8801035    17510324    26483478    17554307    20431018    24508170    30249741    17975172    25329095    27762356    24813606    25186727    30723633    19892987    15944441    17495919    22398555    23594743    22722832    25362486    15496914    18751886    22751099    17431167   

EMBL

BABH01036989    BABH01036990    RSAL01000072    RVE49061.1    KZ150120    PZC73207.1    + More
NWSH01003217    PCG66745.1    KQ460246    KPJ16380.1    AGBW02009314    OWR51101.1    KQ459580    KPI99223.1    JH171770    GEBF01000866    EHB12687.1    JAO02767.1    KB632374    ERL93831.1    KQ971338    EFA02905.2    AAKN02020676    APGK01005693    APGK01005750    APGK01015356    APGK01015617    KB739627    KB739555    KB736406    KB736386    ENN82190.1    ENN82223.1    ENN83206.1    ENN83211.1    GEZM01098974    JAV53599.1    GG738908    EFC38333.1    U21725    CH477353    EAT42852.1    JXUM01104930    KQ564927    KXJ71562.1    KN123014    KFO27109.1    HADW01009522    HADX01010925    SBP33157.1    CYRY02045598    VCX41096.1    AAMC01065358    CR760940    CAJ82036.1    KK107429    QOIP01000014    EZA50938.1    RLU14901.1    AANG04003548    KL870974    KGL89846.1    KK735465    KFR14169.1    KL411511    KFR08331.1    GFDL01009089    JAV25956.1    DS231917    EDS26193.1    KL224695    KFW62758.1    KL225814    KFM03565.1    NTJE010163984    MBW01534.1    BC084063    CM004480    AAH84063.1    OCT67657.1    U37538    AAA79194.1    AEMK02000045    DQIR01028669    DQIR01097159    HCZ84144.1    JH431789    KL205624    KFV72230.1    AB179195    BAE02246.1    GEDC01022833    JAS14465.1    KK448846    KFQ72445.1    KL384202    KFP89337.1    KL897387    KGL84430.1    AQIB01129190    CP026255    AWP12263.1    CABD030107441    CR753843    GECU01006242    JAT01465.1    AJFE02052171    CAAE01014573    CAF99106.1    EF523473    ABP57024.1    ABGA01205428    NDHI03003366    PNJ81163.1    AHZZ02012371    KK741988    KFP39045.1    GCES01000244    JAR86079.1    KL354027    KFZ60847.1    KL218474    KFP05688.1    RJVU01036043    ROL47178.1    KK672668    KFQ06264.1    JH881470    ELR54149.1    BC109624    AQIB01155220    JSUE03047092   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000007151    UP000053268    + More
UP000006813    UP000030742    UP000007266    UP000005447    UP000019118    UP000261560    UP000006671    UP000008820    UP000069940    UP000249989    UP000028990    UP000001038    UP000265180    UP000265200    UP000264800    UP000261440    UP000192220    UP000248482    UP000261681    UP000008143    UP000261400    UP000053097    UP000279307    UP000011712    UP000053858    UP000053605    UP000018467    UP000053283    UP000002320    UP000248481    UP000245340    UP000054081    UP000053286    UP000261460    UP000186698    UP000261680    UP000291021    UP000286642    UP000286641    UP000261580    UP000264840    UP000008227    UP000053584    UP000002281    UP000192223    UP000002280    UP000053641    UP000029965    UP000246464    UP000001519    UP000233180    UP000000437    UP000240080    UP000233200    UP000001595    UP000233140    UP000028761    UP000233060    UP000265000    UP000233080    UP000007303    UP000054308    UP000007646    UP000248480    UP000009136    UP000008225    UP000006718    UP000265020    UP000261620   

PRIDE

H9J2R7    I3L7N8    Q32LE3   

Pfam

PF13499   EF-hand_7        + More
PF13833   EF-hand_8

Interpro

IPR002048   EF_hand_dom        + More
IPR011992   EF-hand-dom_pair       
IPR018247   EF_Hand_1_Ca_BS       
IPR000629   RNA-helicase_DEAD-box_CS       
IPR037629   Centrin_2       

SUPFAM

SSF47473   SSF47473       

CDD

cd00051  EFh

ProteinModelPortal

H9J2R7   A0A3S2NEJ9   A0A2W1BIZ1   A0A2A4J3V5   A0A0N1IIH0   A0A212FBI6   + More
A0A194Q1M2   G5BTS6   U4UUI5   D2A0V1   H0W010   N6UKA8   A0A3B3BNH9   A0A1Y1JWA6   D2VXQ7   P53441   Q179F4   A0A182H2A0   A0A091D4T8   H2LPJ9   A0A3P9IVJ7   A0A3Q3A0T6   A0A1A7YRH1   A0A3B4E3C3   A0A2I4B191   A0A2Y9IW44   A0A3P4S490   A0A384AWK4   Q28HC5   A0A3B4ZXH9   A0A026W4I8   M3WB11   A0A2I4B175   A0A0A0A700   A0A091WF35   W5L4P9   A0A091X492   A0A1Q3FEH8   B0WFF6   A0A2Y9GRJ1   A0A2U3WPZ7   A0A093NCW4   A0A087QQR1   A0A2F0BEU9   A0A3B4EPF0   Q5XHJ4   A0A384C1L3   A0A3Q7UT25   A0A3Q7Q9Q9   Q91643   A0A3Q4HLF1   A0A3Q2W9H1   A0A3B4E3B4   I3L7N8   T1J1R6   A0A093GYM0   F6R406   Q4R3S0   A0A1W4WIG3   F6Z9R8   A0A1B6CM56   A0A091TFE1   A0A091NJT5   A0A099ZUF2   A0A0D9SB69   A0A2U9C7S6   G3QG53   A0A2K6JRR3   A0A0R4IVN1   A0A1B6JQD8   A0A2R9AQL0   A0A2K6JQ77   A0A2K6NM19   Q4SJS6   A5A3G2   H2NW00   A0A2K5XR76   A0A096N013   A0A2K5KWD4   A0A091KIP0   A0A147B5N1   A0A2K6JRP5   A0A2K6NYZ5   A0A2K5HSP1   A0A094KU40   H3CU91   A0A091IDW2   A0A3N0YN57   A0A091Q9J0   G3U355   A0A2Y9E9Y2   L8IF28   Q32LE3   F6RHT8   A0A0D9R3S7   A0A2K5LE64   F7HKU5   A0A3Q2EJH6   A0A3Q4B1G0  

PDB

5D43     E-value=1.18866e-23,     Score=267

KEGG

101746941    K16465 centrin-1 | (RefSeq) caltractin-like

GO

GO:0005509   GO:0008017   GO:0005813   GO:0034605   GO:0032795   GO:0005814   GO:0031683   GO:0032391   GO:0000922   GO:0000278   GO:0007099   GO:0005815   GO:0005737   GO:0007049   GO:0051301   GO:0006289   GO:0070390   GO:0032465   GO:0071942   GO:0044615   GO:0036064   GO:0007283   GO:0006413   GO:0043565   GO:0008152   GO:0016746   GO:0006355   GO:0003824   GO:0016491   GO:0015930  

PANTHER

PTHR23050:SF305  

Subcellular location

  

Length:

184

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08501

outside

1  -  184

 

 

Pi

237.566439

Theta

126.392438

Tajima's D

2.145429

CLR

0.171946

CSRT

0.903204839758012

Interpretation

Uncertain