SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14774  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003805
Annotation
putative_phosphatidylethanolamine-binding_protein_isoform_1_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 1.907 Nuclear   Reliability : 1.521
 

Sequence

CDS
ATGTCAAACGTACAGACAATGTTCCAGAAGCACTGCATAGTGCCAGATATTATTACAACACCCCCGTCTGAGTTGTTGAATATTCAGTATTCTAACGGCATAAATGTTGATTTGGGAAAAGAGTTGACTCCAACTCAAGTAAAAGACGCTCCGACTGTCAAGTGGGCTAGTAAGGAAAATGAATATTATACACTTGCAATGGTGGATCCGGACGCGCCGAGTCGGGAGAATCCAAAGTTCCGAGAATGGCATCACTGGTTAGTCGGGAATATCTCCGGTGGAAATATTGGTAAAAGTGAAATTTTATCGGAATATATTGGATCGGGGCCACCGAAAGGAACCGGCCTTCATAGGTACATATTTTTAATTTACAAGCAACCAGAAAAATGTGATTTTTCGAAAGTTCCAAAATTACCAAACAATTCCGGTGAAAAGAGAGGAAAGTTTTCTATCTCTCAATTTGCTCAGCAGTATAAACTTGGGATTCCAGTTGCGGGAAATTTCTTCGTTGCTCAGTACGATTCTTATGTTCCAAAATTCGTTTCGTTGAAACAAAGAGACCCTACGTTCAATCGTATGTCCATCCAGAATCTCAACACATTCGACCCATTCGCCGATGCTATCAAAAGCTCGGAGGACGACGTTCAAGATGGTTTAGTCCACGTCCGTATCCAGCAACGAAACGGGCGTAAGACGCTGACTACGGTGCAAGGCCTTTCCTCGGAATATGACCTGAAGAAGATCGTGCGGGCATGCAAGAAGGAGTTCGCGTGCAACGGTACGGTCGTGGAGCACCCGGAGTACGGCGAGGTGCTGCAGCTTCAGGGCGACCAGCGAGAGAATATTTGCCAGTGGCTCACCAAATCCGGCTTAGTGAAGCCTGAACAACTCAAGGTGCACGGTTTCTAA
Protein
MSNVQTMFQKHCIVPDIITTPPSELLNIQYSNGINVDLGKELTPTQVKDAPTVKWASKENEYYTLAMVDPDAPSRENPKFREWHHWLVGNISGGNIGKSEILSEYIGSGPPKGTGLHRYIFLIYKQPEKCDFSKVPKLPNNSGEKRGKFSISQFAQQYKLGIPVAGNFFVAQYDSYVPKFVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF

Summary

Pfam
PF01161   PBP        + More
PF01253   SUI1
Interpro
IPR036877   SUI1_dom_sf        + More
IPR001950   SUI1       
IPR008914   PEBP       
IPR005874   SUI1_euk       
IPR036610   PEBP-like_sf       
IPR035810   PEBP_euk       
SUPFAM
SSF55159   SSF55159        + More
SSF49777   SSF49777       
Gene 3D
PDB
5TVD     E-value=1.8072e-54,     Score=536

Ontologies

Topology

Length:
302
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02382
Exp number, first 60 AAs:
0.00021
Total prob of N-in:
0.06410
outside
1  -  302
 
 

Population Genetic Test Statistics

Pi
224.275721
Theta
196.70415
Tajima's D
0.441172
CLR
0.223223
CSRT
0.494725263736813
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 SGLVKPEQLK 100.00 7e-05
28556443 SIQNLNTFDPFADAIK 100.00 0.001
28556443 FEIPYFTTSGIQVR 100.00 0.001
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号