Gene
KWMTBOMO14768
Pre Gene Modal
BGIBMGA003810
Annotation
PREDICTED:_homeobox_protein_Hox-B5a_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.602
Sequence
CDS
ATGATGGAGCAACGTCAGAATTCGGTGTATCCATCGAACCTAACGGACTTCCTGACTGCCTCCGCGTACCAGCAGAACGTGGAACGTCTCTCGAACCTCACGGAAGACGACAACTATGAGGCGGAGAATCTCGACAGGTCTTCGTCGCCGGTATCAGCGCTGGACGACGGAGACAGTAACCATTCGGCTTTCGGCGTGGATTTGACGGGAAAATCCACGAATTTGGGGGGGAAATCTTTTACGATAGCTGCCATTTTGGGCTTGACGGGCCCTGATGAGGACGTTATGAACTTAAGCGTCCAGGAACGACTGCAGAATCAGAGGAACCTGCACAATTACCTGTACTCTGGTCACGAGGTGCAGAGACTGAATGAAGGCTTCAGAGGCATTGTGACCGGACCGACCGGGCTAAGACAAGACAGTCCCCGACCTGAAATCCGGCAGCAGATTGGCCAGATGAAGAGCTCGAGGAGCCATACCTTATGTTCTACAAGCTCGGGCCGGAGTAAGAGGATAAGAACAATATTCACTCCTGAGCAACTGGAGCGGCTGGAGGCGGAATTCGAGAGGCAACAGTACATGGTCGGCCCCGAGAGGCTGTATTTAGCGCACGCGCTGCATCTCACGGAAGCTCAGGTGAAGGTGTGGTTCCAAAATCGGCGTATAAAATGGCGGAAGCACCATCTGGAAGTGACGCAGCAACGCTTGGCCGTACTCCAGCGACACCACCACGACCAAGAGGAAGACGCTTAG
Protein
MMEQRQNSVYPSNLTDFLTASAYQQNVERLSNLTEDDNYEAENLDRSSSPVSALDDGDSNHSAFGVDLTGKSTNLGGKSFTIAAILGLTGPDEDVMNLSVQERLQNQRNLHNYLYSGHEVQRLNEGFRGIVTGPTGLRQDSPRPEIRQQIGQMKSSRSHTLCSTSSGRSKRIRTIFTPEQLERLEAEFERQQYMVGPERLYLAHALHLTEAQVKVWFQNRRIKWRKHHLEVTQQRLAVLQRHHHDQEEDA
Summary
Uniprot
EMBL
Proteomes
Pfam
PF00046 Homeodomain
Interpro
SUPFAM
SSF46689
SSF46689
ProteinModelPortal
PDB
2ME6
E-value=3.65464e-12,
Score=170
Ontologies
GO
Topology
Subcellular location
Nucleus
Length:
250
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01759
Exp number, first 60 AAs:
0.00091
Total prob of N-in:
0.16395
outside
1 - 250
Population Genetic Test Statistics
Pi
262.266302
Theta
49.782188
Tajima's D
1.268449
CLR
10.25412
CSRT
0.731413429328534
Interpretation
Uncertain
