Gene

KWMTBOMO14762

Pre Gene Modal

BGIBMGA003814

Annotation

PREDICTED:_glycerophosphodiester_phosphodiesterase_1-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr24(-):14578409-14587566      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.293 PlasmaMembrane   Reliability : 1.262

CDS

ATGTTTTCGAAACTGTACACGATGTGCCAAATGTTTTGGAACAATATGTACTATTTATTTTCGTTTATAAACCTTTTAATTATTTATGTACATTTAGTTTTGCCCTTTGGTCTGGATGTCGGCTTGGCTTTTGCTGCTATGTATTACATCACCGCCCTGGAACGTCCTGATAAAGAGAGGGTACAGAAAATTTTTGGACACGATCCCTGGAGTAAAGATGAGGTTAAAAATTCTGAGGAAGTGGTGCATTGCATCGCTCACCGAGGAGCTGCACTTGACGCGCCGGAGAACACAATCGAAGCATTTAAATATTGCGTTGAACAAAACTGCAAGTTCGTCGAGATGGACGTGCGTTCGTTGCGAGACGGACAGCTGGTGCTGCTGCACGACGAGGGTCTGCAGCGTCTGACTGGAACCACGATCAACAACGTGCAGTGCGTCGACTGGGACGCCATAAAGGATTACAACGTGGCCGCCAATCATCCGAACAGGGAGCATTTCAAAGATGTGCGCCTATGTCTCTTCGAGGATGCACTGGACTATTTGCTCGAGAATAAATTTAAAATGATTATCGACGTCAAAGGCGTAGATCAAGAGGTGATATCCGGTGTCCTGGACGCGTTCGCCACCCGACCGGCTCTGTACGAGTCCGCAGCCGTGACCTGCTTCAACCCTTACCCGCTGTACCTGATCCGTAAAACCGATCCGAAAATCATTGGAGCTTTAAGCTATCGTCCGTATTGCTTTAGCGCGCAGGATTATGACGCCGAGAATGGACCAACGAATCCTAGGTTCCCTGACAGCGTCGTGCACCGGGTCGCGATGCGTGCGTGCGACGCGCTCCACGGGGTCGCGTGGCGGCGGCTCGCCCGCTGGTGCGGGGTCAGCGCCGTGCTCCTGCACAAGGACATTGTCAGCCCGAGCGAGGTGGAGTATTGGCGCGGGCTGGGCGTGCGGTGCGTCGGCTGGGCGGTGAACCGGCCCGTCGAGAAGCTGTACTGGCGCGGCGTGCTGAGGGCCGCCTACCTCGCGAGCACGCTGCTCGGCGAACCGGCCGTGGAGAAACAGAGCAAAGATAAGACCAGCTCTGACTGCGCAGCCTCTTCACCCGAACAAATGCTGGACCCGGAACAGACTGAGCAGAACGTATCGTCTGGACGAAATTAA

Protein

MFSKLYTMCQMFWNNMYYLFSFINLLIIYVHLVLPFGLDVGLAFAAMYYITALERPDKERVQKIFGHDPWSKDEVKNSEEVVHCIAHRGAALDAPENTIEAFKYCVEQNCKFVEMDVRSLRDGQLVLLHDEGLQRLTGTTINNVQCVDWDAIKDYNVAANHPNREHFKDVRLCLFEDALDYLLENKFKMIIDVKGVDQEVISGVLDAFATRPALYESAAVTCFNPYPLYLIRKTDPKIIGALSYRPYCFSAQDYDAENGPTNPRFPDSVVHRVAMRACDALHGVAWRRLARWCGVSAVLLHKDIVSPSEVEYWRGLGVRCVGWAVNRPVEKLYWRGVLRAAYLASTLLGEPAVEKQSKDKTSSDCAASSPEQMLDPEQTEQNVSSGRN

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

H9J2S7   A0A2A4JC31   A0A194Q0U6   A0A2Z5U775   A0A212F4U2   A0A2H1WNG8   + More
A0A2W1BND0   A0A232ELT2   A0A0T6BC52   A0A067R7U7   A0A1B6LJD5   A0A1Y1N414   E2AT99   A0A1B6DZC9   A0A2J7PGR9   A0A026WZI2   A0A151IH07   E9IZ71   A0A0J7KYX9   E0V9S9   D6WBB2   A0A158NLD1   A0A154PTF7   A0A195B2C9   V5GN05   A0A0L7RIV3   A0A2A3EC29   A0A151XCC9   A0A146LD76   A0A195F2N9   A0A0N0U6W1   F4X6L8   K7JDI7   A0A2J7PGS8   A0A2P8ZBI1   A0A0A9X007   A0A195E6F0   A0A088AHI6   A0A1W4XD93   A0A3P8S7F3   A0A3Q1GJ84   A0A3Q1BFK7   A0A1V9XN02   A0A3B3I0F9   A8KBQ9   Q6P0H8   A0A3Q3CLX7   A0A3B4ZN46   A0A3P9JMQ6   A0A3P9L7L0   R4FLN1   A0A3P9MH18   T1HFM5   Q7ZUV3   A0A3P8Z4H1   A0A1D2NHR7   A0A3B4U3B0   A0A3B4XP93   A0A224XQU3   A0A2L2XW37   R7UV28   A0A023F6T3   A0A2L2XW40   A0A3Q1HX16   A0A3Q0S7W2   A0A3N0ZAH6   A0A3Q3SAY8   A0A2K5EEP4   H0X1U1   G1SK10   A0A3Q0SCU2   A0A250YFP8   A0A0S7GW15   A0A3B3QX43   A0A3B4U7M4   A0A3Q3XRW5   A0A3Q1JJV9  

Pubmed

19121390    26354079    22118469    28756777    28648823    24845553    + More
28004739    20798317    24508170    30249741    21282665    20566863    18362917    19820115    21347285    26823975    21719571    20075255    29403074    25401762    28327890    17554307    23594743    25069045    27289101    26561354    23254933    25474469    21993624    28087693    29240929   

EMBL

BABH01036940    BABH01036941    NWSH01002018    PCG69409.1    KQ459580    KPI99207.1    + More
AP017492    BBB06765.1    AGBW02010304    OWR48765.1    ODYU01009894    SOQ54615.1    KZ150120    PZC73183.1    NNAY01003499    OXU19323.1    LJIG01002110    KRT84830.1    KK852879    KDR14441.1    GEBQ01016207    JAT23770.1    GEZM01015913    JAV91425.1    GL442545    EFN63344.1    GEDC01006484    GEDC01006278    JAS30814.1    JAS31020.1    NEVH01025164    PNF15533.1    KK107063    QOIP01000005    EZA61238.1    RLU22587.1    KQ977647    KYN00849.1    GL767119    EFZ14113.1    LBMM01001916    KMQ95551.1    DS234996    EEB10135.1    KQ971312    EEZ98717.1    ADTU01019320    KQ435119    KZC14714.1    KQ976662    KYM78435.1    GALX01002987    JAB65479.1    KQ414583    KOC70738.1    KZ288310    PBC28601.1    KQ982314    KYQ58015.1    GDHC01013030    JAQ05599.1    KQ981864    KYN34359.1    KQ435727    KOX77924.1    GL888818    EGI57800.1    AAZX01000022    AAZX01000037    AAZX01008686    AAZX01012922    AAZX01024815    PNF15532.1    PYGN01000115    PSN53858.1    GBHO01030598    JAG13006.1    KQ979568    KYN20780.1    MNPL01007199    OQR74890.1    BC154208    AAI54209.1    AL953841    BC065614    AAH65614.1    GAHY01001313    JAA76197.1    ACPB03012557    BC047818    AAH47818.1    LJIJ01000041    ODN04516.1    GFTR01005494    JAW10932.1    IAAA01002116    LAA00296.1    AMQN01006037    KB297448    ELU10493.1    GBBI01001621    JAC17091.1    IAAA01002114    IAAA01002115    LAA00292.1    RJVU01000282    ROL55436.1    AAQR03077450    AAQR03077451    AAQR03077452    AAQR03077453    AAQR03077454    AAGW02057074    GFFW01002343    JAV42445.1    GBYX01450982    GBYX01450980    JAO30522.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000215335    UP000027135    + More
UP000000311    UP000235965    UP000053097    UP000279307    UP000078542    UP000036403    UP000009046    UP000007266    UP000005205    UP000076502    UP000078540    UP000053825    UP000242457    UP000075809    UP000078541    UP000053105    UP000007755    UP000002358    UP000245037    UP000078492    UP000005203    UP000192223    UP000265080    UP000257200    UP000257160    UP000192247    UP000001038    UP000000437    UP000264840    UP000261400    UP000265200    UP000265180    UP000015103    UP000265140    UP000094527    UP000261420    UP000261360    UP000014760    UP000265040    UP000261340    UP000261640    UP000233020    UP000005225    UP000001811    UP000261540    UP000261620   

PRIDE

H9J2S7   

Pfam

PF03009   GDPD        + More
PF00858   ASC
PF16794   fn3_4

Interpro

IPR030395   GP_PDE_dom        + More
IPR017946   PLC-like_Pdiesterase_TIM-brl       
IPR001873   ENaC       
IPR036116   FN3_sf       
IPR013783   Ig-like_fold       
IPR003961   FN3_dom       

SUPFAM

SSF51695   SSF51695        + More
SSF49265   SSF49265       

Gene 3D

3.20.20.190     2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

H9J2S7   A0A2A4JC31   A0A194Q0U6   A0A2Z5U775   A0A212F4U2   A0A2H1WNG8   + More
A0A2W1BND0   A0A232ELT2   A0A0T6BC52   A0A067R7U7   A0A1B6LJD5   A0A1Y1N414   E2AT99   A0A1B6DZC9   A0A2J7PGR9   A0A026WZI2   A0A151IH07   E9IZ71   A0A0J7KYX9   E0V9S9   D6WBB2   A0A158NLD1   A0A154PTF7   A0A195B2C9   V5GN05   A0A0L7RIV3   A0A2A3EC29   A0A151XCC9   A0A146LD76   A0A195F2N9   A0A0N0U6W1   F4X6L8   K7JDI7   A0A2J7PGS8   A0A2P8ZBI1   A0A0A9X007   A0A195E6F0   A0A088AHI6   A0A1W4XD93   A0A3P8S7F3   A0A3Q1GJ84   A0A3Q1BFK7   A0A1V9XN02   A0A3B3I0F9   A8KBQ9   Q6P0H8   A0A3Q3CLX7   A0A3B4ZN46   A0A3P9JMQ6   A0A3P9L7L0   R4FLN1   A0A3P9MH18   T1HFM5   Q7ZUV3   A0A3P8Z4H1   A0A1D2NHR7   A0A3B4U3B0   A0A3B4XP93   A0A224XQU3   A0A2L2XW37   R7UV28   A0A023F6T3   A0A2L2XW40   A0A3Q1HX16   A0A3Q0S7W2   A0A3N0ZAH6   A0A3Q3SAY8   A0A2K5EEP4   H0X1U1   G1SK10   A0A3Q0SCU2   A0A250YFP8   A0A0S7GW15   A0A3B3QX43   A0A3B4U7M4   A0A3Q3XRW5   A0A3Q1JJV9  

PDB

2PZ0     E-value=5.48036e-10,     Score=154

KEGG

101745184    K19179 glycerophosphoinositol glycerophosphodiesterase [EC:3.1.4.44] | (RefSeq) glycerophosphodieste

GO

GO:0006629   GO:0008889   GO:0016021   GO:0005272   GO:0008081   GO:0070291   GO:0004622   GO:0016020   GO:0006644   GO:0047395   GO:0045252   GO:0008152   GO:0016746   GO:0006355   GO:0003824   GO:0016491   GO:0015930  

PANTHER

PTHR11690  

Length:

388

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.67177

Exp number, first 60 AAs:

23.6605

Total prob of N-in:

0.99230

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  388

 

 

Pi

52.102499

Theta

51.139205

Tajima's D

0.162814

CLR

116.267681

CSRT

0.417979101044948

Interpretation

Possibly Positive selection