Silkworm Genome Informatics Database

Gene

KWMTBOMO14760

Pre Gene Modal

BGIBMGA003816

Annotation

PREDICTED:_uncharacterized_protein_LOC106129319_[Amyelois_transitella]

Location

Bomo_Chr24(-):14543817-14557356 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.238

CDS

ATGCAGGCTCAAAAGAAAACGACGACGGAGAAAATTAAAAAAGAAAAATCCGGAGAGGCGGAAACAGCGAAAAAGTTGCCAGATGATAAAATAAAAAAAAATAATCACGGTGCTGCGACACCAAGAGCTTACCAACGGAAATCTACCGCCGCCGATATTTATACGCAAAAAAGTCAAACATCGCTAAGCAGCGTTAAAGCGCCCAGAAAATCTCTGAACACAACGAGAACTACAAAGGAATCTCCAATGAAAGACTTATTGAAATCGACTTCGAATGTGAGCGTTGTCAGTAAGTCTTCCATCGACAAAACGGCAGAGTCCAGCGCTGAAGCTAAACGAACTACAAGATTATCAAAAGAATTACCTTTTTTAAAAGCAAATTCACCTGTCACCCAAAAACGAAAAATTTTAGACGACAAACGAACCACAATTGTTGGCCGTTCGAAATTGGAACGTGAAGAATCTAGTGCTGCAAGCAAAAAGGAAATCGGCCGGCTTTTCAAGATTAACAGTGACAGTTTGAAAAACGAAGGCAGTGTTGCGAGATCAACAAAACGCGTTACAGTCCCGGAAAACGTCAAAGAAAGGCAAAGGAGTAAAACGCGAACTTTAGACGAGAATGAAGTGAAAATACTGACGGCCGACGTTGTTGATAACAACGCTGAGATGAGGAATCTATCGAAGAAGCTAACCGCTCAGCCTAAAGCGTTTTTTGTGGGTTTGGATGACGGCGAATCAAAGGAGAAAACAAGCGAAGATGAGGTAAGCTATGAAGATGACTTTGAAAGCTACGAATCGGATTTCGAGTCGTATCACAGTGATGCGTCACCGCCTGGTGATGGTAGTTCAGCTGATAGTGACGATCACACCGAACCTCATCACGAGGTTGGACATGACCGACTCGCGACCTCAAAGGAGGTCAGAGACGAAGAGAACATGTTGGATTCGGGCAGCTATGATCTTCGAGATCGGTCAGCCAAAGCCAAGGCTTCAACCATGGAGTTCATCGTTGAGGATTCAGAAGATCACAGCGACAAAAAGCCGTCCCTCACCGACGAGGGCTTCCAGGAGATGAGCTCTTCCAGCGCCGTGTCAAGTTTGCGAACCGTCCACGAATGCATTGATAGGCAAAACTTTATAGATTTCGGTACTAGATCGAGGGAATGGAAACGGAAGCGACGCGTTCTAGAGATGCTAAAACGGCGCGCTGCCGATATACTAGGCATGGTCAGTCTGCACGAAGTATCGTATGTTTTGTTCGAAGCGAAACCTATTGCCTACGAAAAGTACATGTCTAGTTTTGGTCGCAGCGGCCGCGCTCAGAACAGCTCTCAGACTTTTGATGACGGCGCGAATCAAGAGACACAAACCGATGAGATATTATTAAGTCATAAATGGACGCAGAACCCTGTGGATTTTACGTATAACGATATATACGTGTACCCGAGTGTTTGTTCTAGAAAATACAGCGAATGTACAGTAGATTATATGGCGAGGTTTAGTTTTTTGACGAAATCTAACGATTTTAATGCGAGCAACGTTGAGATCGAAATGGATGATGTTTATAAACGAAATCCTTTGAGGATTTATTTGGAACAGAGGAATGGCGTCGGTACCGGCGAAATGTTGCCATACGAAAAATACGAAAGCAGACTAAAAGGAATCGTTTACGAACGTAATCGTTTGAGGAGATTTTTGAAGAGAACCGAAAGTAAAATTTTTAGCGCTCTTAATAAGAACGCCGGTAAAAGAGAATTGATTGATTTAAATAGAAATACAAAATTGCCATTTAGCCAAGGATACGTTATGGTTAATTTTAATGTTGACGATGATAGATTAAACTTCATTGTACAATCAAAAGTAACGAAAATCATATATTCGAAAGCGAAAAGCAATTTAATCATGACGGTACACAGTCGAAAAGATTTAAACAACAAACGTGTTCTGTGTATTTGGGACGTCGGTGTTGCAAGATTCGAACCCATTAAAATACTAATTTCGATCGATGGTATTATTCTGGGACAGTTTCAAGGCAACACCGATGGTATTTTCGTGGCAGCGTTGGAAGACGGTTCAATACATCTCTGGGAATTATCCGAAGAGCCTACGTGGCGAAGCGATGTTGCCAGCGATCGAAAATCTACTAATTTAAAAGAACTAACCATCGACGAAATCACTCCCACTGAGAAAGATCGAGAATTAAATTTGAATAGTGATAGTATTGATAGCACTCAGGAAGCGATTCCTTGTGCCTTGCAAGCCTGCGCGTTCACGACCAGCGCTTTCAACTTATCGTGCGCGGAGAACGCTGACAGGATCATTGGCTTGGAGCTAACCGCGCATGAGACCCGAGAGGCGAACGGAAGAAGAGTCCTGGGACAGACGATCGTGCTTCAGCGCACAGGCAAACTTTGCGTGTGGCTGATAGTCCGAGATAAAAATAAAAGCAGCTTTACGGACATCGGCAAAGCTTACAGTTCGCGAACGAGCTTGGAAATGTTTCAAACGATTTTACTGTCGGATTACATTGATTCGACAATCGAAGAAGGTGTTGCCTTTGATTTGTGTGCAGCCAAACGTAGATTGACGTTGAGGCGGCGAGAGAGAATCGAATTTTCGCGCCCAAACACGGCCAAGAAGTTCGAATGTGACGTTACGCGCGCTAAAAGTAACACAGTGTTGCCAGCCGATAAAAGGACTCCTACTATATGGGAGAGTATGATTTGTTACGATTTGAAGATTGTTAATGTTGGCAACATCGATCATTATTTGGTAGCCAAAAATGTTGGCGAGGTATTGAGTTGTAAGAAGAGCGTTGGCGGTGTTAAAGTTAGAAGATTTCGTGTGACAAACGATAAGTCGTTAGTGACCAATGTGCAAGTCGCCCCGGCGCTGCCGTACTTCATGGCGTCCACTGAGTCGGGAACTGTAAACCTTTGTTCGTTACTGGAAAACAGGGTTCTGCTCACATTGGACTGCAGAAATATTTCTCCGGCTCGAGAACCGACTGAGAGGTGTCGGTCGGATAGCAAGGGCAGGTACATCAGCAGCGTCGCAGCCCCAGCGGTGTTCGGCTGTGATGCTGGAATGATGTCGGTGACGTCACTAATATGGCCGCCTTCGAACCCCTGTCAAATTTTCGCGCTTCTAAAGGACGGAAGCGTCGTCGCCTGGGATCTGACCACCAGTGACATCTACGGGAAAGTGTCAACGGAAAAATGTAGGTCTATAGCTGGCGGTCAAAATAGTTTGGCCTTATTAACACACGAAGGTAGCATTCAATTGCACAAGCTAAAGAGTGATACGCCAAGTGACGAGAATATGAAGATTTTCAACAAATACGTCGCTCTGCTGTGA

Protein

MQAQKKTTTEKIKKEKSGEAETAKKLPDDKIKKNNHGAATPRAYQRKSTAADIYTQKSQTSLSSVKAPRKSLNTTRTTKESPMKDLLKSTSNVSVVSKSSIDKTAESSAEAKRTTRLSKELPFLKANSPVTQKRKILDDKRTTIVGRSKLEREESSAASKKEIGRLFKINSDSLKNEGSVARSTKRVTVPENVKERQRSKTRTLDENEVKILTADVVDNNAEMRNLSKKLTAQPKAFFVGLDDGESKEKTSEDEVSYEDDFESYESDFESYHSDASPPGDGSSADSDDHTEPHHEVGHDRLATSKEVRDEENMLDSGSYDLRDRSAKAKASTMEFIVEDSEDHSDKKPSLTDEGFQEMSSSSAVSSLRTVHECIDRQNFIDFGTRSREWKRKRRVLEMLKRRAADILGMVSLHEVSYVLFEAKPIAYEKYMSSFGRSGRAQNSSQTFDDGANQETQTDEILLSHKWTQNPVDFTYNDIYVYPSVCSRKYSECTVDYMARFSFLTKSNDFNASNVEIEMDDVYKRNPLRIYLEQRNGVGTGEMLPYEKYESRLKGIVYERNRLRRFLKRTESKIFSALNKNAGKRELIDLNRNTKLPFSQGYVMVNFNVDDDRLNFIVQSKVTKIIYSKAKSNLIMTVHSRKDLNNKRVLCIWDVGVARFEPIKILISIDGIILGQFQGNTDGIFVAALEDGSIHLWELSEEPTWRSDVASDRKSTNLKELTIDEITPTEKDRELNLNSDSIDSTQEAIPCALQACAFTTSAFNLSCAENADRIIGLELTAHETREANGRRVLGQTIVLQRTGKLCVWLIVRDKNKSSFTDIGKAYSSRTSLEMFQTILLSDYIDSTIEEGVAFDLCAAKRRLTLRRRERIEFSRPNTAKKFECDVTRAKSNTVLPADKRTPTIWESMICYDLKIVNVGNIDHYLVAKNVGEVLSCKKSVGGVKVRRFRVTNDKSLVTNVQVAPALPYFMASTESGTVNLCSLLENRVLLTLDCRNISPAREPTERCRSDSKGRYISSVAAPAVFGCDAGMMSVTSLIWPPSNPCQIFALLKDGSVVAWDLTTSDIYGKVSTEKCRSIAGGQNSLALLTHEGSIQLHKLKSDTPSDENMKIFNKYVALL

Uniprot

A0A2H1WCT0 A0A3S2NJC7 A0A0N0PC98 A0A067RN08

Pubmed

26354079 24845553

EMBL

ODYU01007786 SOQ50847.1 RSAL01000072 RVE49050.1 KQ460735 KPJ12631.1 + More
KK852411 KDR24443.1

Proteomes

UP000283053 UP000053240 UP000027135

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf
IPR001680   WD40_repeat
IPR019775   WD40_repeat_CS

SUPFAM

SSF50978 SSF50978

Gene 3D

2.130.10.10

ProteinModelPortal

A0A2H1WCT0 A0A3S2NJC7 A0A0N0PC98 A0A067RN08

KEGG

101745037 K22869 WD repeat-containing protein 60 | (RefSeq) WD repeat-containing protein 60

GO

GO:0005515 GO:0016758 GO:0050482 GO:0009451 GO:0009982 GO:0006355 GO:0003824 GO:0008152 GO:0016491 GO:0015930

Length:

1118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02886

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00027

outside

1 - 1118

Pi

243.746047

Theta

152.936462

Tajima's D

2.281756

CLR

0.184179

CSRT

0.92210389480526

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics