Gene

KWMTBOMO14747  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003822

Annotation

PREDICTED:_protein_mahjong_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(-):14098073-14113731      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.393

CDS

ATGGATTCGCCACCGGCTCAAGAGGTAACAGAACTGTTGAGGCAATGGGAGGAACAACATACGCAGCCAAATTACGATCCTATACCCACTTTGACGAGGATAGCAGAGATCATAGAAGCAGAGACAGAGAACTTCATGAAAAAAGACCCAGACCCGTTTGACGAGAGACATCCATCCAGGACAGATCCGGAGTGTGCTCTGGGCCATGCACTCAAAGTTATGTTTAAGAAAGACAATTTTATGACTAAGTTAGTTAATGACTACGTCCGAGACACATACTACTCAAGGCAGAATATCACAGGACGAGATGTCCACAAGTTAAATGTTGCTGCGTGCAGACTGACCTTAGACCTGATGCCCGGATTAGAAATGAGCGTCGTATTTCAGGATAACGAGGCATTGATACAGAGGCTAGTGAACTGGGCGACCAGCTCCACGGAGCCGCTGCAGTGCTACGCCACGGGCCTGCTCGCAGCCGCGATGGAGGTGCAGGATATAGCTACTAATTTTAGGGACCTAAATGCAATGTTAGTTCCTCTCATGTTGAGGAGGCTGCACGGCTTGAGGAACAAAAACCAAGATGATAAGCAATGCAGTCAAGTAACGCCGCCCAGTCAGACGAGACACTTCGCGCGCTTCGACAAGAAACGCAATAACGATATAAAATGCAATGGACCGGGGTCAGAGAAAAATGGAGAACCAGATCGAGATAAAGACAAAGATGGGGGCGCCGAGGACATGGCGGTCGACGATCCGCCCACGACAGATCCCGAGACGCCGGTTAAAAATTACAATAACAGCGCCGCGTCCCCCCCCGCGTGGGGCATGATGTCCCCCCCGCCGCGCCCGCCGCCCCCCTCCGCGCACCACAACCACGAGACCTCCTCCAACTCGAGCTGGGCGGAGATGGAGACCTACGTCATAGGTAACATACAGATACACCCGCCGACCGACGCCACTAAGCAGATGCTCATACTCAGGTACCTGACACCGATGGGAGAATATCAAGAATTTCTGTCACATGTCTTCGAGCAGAACGCCCTAGGGCTGATCCTGGGGTACCTCAACGTACGGGAGTCCCGAGACTCCCGTCTGGCCTTCGAAGCCCTAAAGTACTTGGCGGCGCTCCTGTGCCACAAGAAGTTCTCGATAGACTTTATAAACATGGGAGGGTTGCAGAAATTCTTAGAAGTACCAAGGCCATCCGTCGCCGCCACCGGCGTCTCCATCTGCCTGTACTACCTGGCCTACTGCGAGGACGCAATGGAACGCGTCTGCCTCTTGCCGAGGAAGACTTTAGCGGACTTAGTGCAATACGCCCTGTGGCTTCTAGAATGTTCGCACGACTCCGGCCGCTGCCACGCGACCATGTTCTTCGGCCTCTCGTTCCAGTTCCGGGTCATTCTCGAGGAGTTCGATAACCAGGACGGTCTGAGGAAGCTGTACAACGTGATATCGACGCTCCCGATCCTCGGCTCCGACGAGGAGGAGTCCAGGGTGTCGGACGACGAGACCTGCGCCGCGCGGCAGATCGTCAGGCACGTCTGCGTCGCCCTCAGGAGGTACCTGGAGGCGCACCTCCGGCTAAAGGCGGCGCAGGTGTCCCGGCAGCACGGCGACAGCGTGCCCGACCCGCCACCCTACAAGGTTAGTGGACGTCGTCTCGCCAAGCTTTTAGTTGCCCATGGACATATGTATTGA

Protein

MDSPPAQEVTELLRQWEEQHTQPNYDPIPTLTRIAEIIEAETENFMKKDPDPFDERHPSRTDPECALGHALKVMFKKDNFMTKLVNDYVRDTYYSRQNITGRDVHKLNVAACRLTLDLMPGLEMSVVFQDNEALIQRLVNWATSSTEPLQCYATGLLAAAMEVQDIATNFRDLNAMLVPLMLRRLHGLRNKNQDDKQCSQVTPPSQTRHFARFDKKRNNDIKCNGPGSEKNGEPDRDKDKDGGAEDMAVDDPPTTDPETPVKNYNNSAASPPAWGMMSPPPRPPPPSAHHNHETSSNSSWAEMETYVIGNIQIHPPTDATKQMLILRYLTPMGEYQEFLSHVFEQNALGLILGYLNVRESRDSRLAFEALKYLAALLCHKKFSIDFINMGGLQKFLEVPRPSVAATGVSICLYYLAYCEDAMERVCLLPRKTLADLVQYALWLLECSHDSGRCHATMFFGLSFQFRVILEEFDNQDGLRKLYNVISTLPILGSDEEESRVSDDETCAARQIVRHVCVALRRYLEAHLRLKAAQVSRQHGDSVPDPPPYKVSGRRLAKLLVAHGHMY

Uniprot

H9J2T5   A0A3S2PEH5   S4PF91   A0A212F5C9   A0A194Q0X0   A0A069DY73   + More
K7IMJ1   A0A224XHV9   A0A146LRX2   A0A146KJI0   D6WJD4   A0A0P5Z8X9   A0A0P6D1V7   A0A0P5MKG0   A0A0N8AD33   A0A0P5K0R4   A0A0P5JXW4   A0A0N8BGJ6   A0A164KEF0   A0A0P6CVD7   A0A0P5QVM6   A0A0P6E9P6   A0A0P6FZA4   A0A0P5Q4R1   E9GVW2   A0A0P6CHP2   A0A0P5XZB4   A0A0P5N8F4   A0A0P5NAL5   A0A0P5YES2   A0A0P6E2L8   A0A0L7RH82   B0X6E2   W4VRK8   A0A182SUR4   A0A023EWE5   Q17PN7   A0A1S4EVD4   T1J9J0   A0A182KT44   Q7PZX5   A0A182VKI7   A0A182HPP5   A0A131XYM6   A0A182X032   A0A1A9WIG1   A0A182K226   A0A336LYJ1   A0A1S3K840   A0A1S3K7Q1   A0A182WD69   R7VL56   A0A1J1IC47   B4KS40   A0A3Q1BNF8   A0A0Q9XA42   B7PZ89   W5N7K9   A0A3Q3B1R8   B4JWH7   H3B9R8   A0A3B4WWW4   A0A3B4F330   A0A3P8R4X5   A0A0F8AIJ7   A0A3Q3BQQ8   A0A3Q1HXL7   A0A3P9DAF2   C3YPF6   A0A3Q3DWD7   A0A3Q3S4D7   A0A3Q2CXL5   A0A3B4DRT9   I3KLA0   A0A2Z2L0N8   A0A3N0XMC5   A0A087TRG9   A0A3P8YQZ6  

Pubmed

19121390    23622113    22118469    26354079    26334808    20075255    + More
26823975    18362917    19820115    21292972    24945155    17510324    20966253    12364791    23254933    17994087    9215903    25835551    25186727    18563158    25069045   

EMBL

BABH01036896    BABH01036897    BABH01036898    RSAL01000072    RVE49076.1    GAIX01004142    + More
JAA88418.1    AGBW02010216    OWR48909.1    KQ459580    KPI99196.1    GBGD01000098    JAC88791.1    GFTR01008795    JAW07631.1    GDHC01009469    JAQ09160.1    GDHC01021888    JAP96740.1    KQ971343    EFA04458.2    GDIP01047033    JAM56682.1    GDIQ01086381    JAN08356.1    GDIQ01158002    JAK93723.1    GDIP01159273    JAJ64129.1    GDIQ01217095    JAK34630.1    GDIQ01197784    JAK53941.1    GDIQ01179891    JAK71834.1    LRGB01003325    KZS03192.1    GDIQ01089727    JAN05010.1    GDIQ01118417    JAL33309.1    GDIQ01065835    JAN28902.1    GDIQ01051898    JAN42839.1    GDIQ01125662    JAL26064.1    GL732569    EFX76381.1    GDIP01008474    JAM95241.1    GDIP01066329    JAM37386.1    GDIQ01148413    JAL03313.1    GDIQ01148412    JAL03314.1    GDIP01058729    JAM44986.1    GDIQ01068688    JAN26049.1    KQ414592    KOC70220.1    DS232412    EDS41425.1    GANO01002028    JAB57843.1    GAPW01000013    JAC13585.1    CH477190    EAT48714.1    JH431975    AAAB01008986    EAA00204.4    APCN01003267    GEFM01004438    JAP71358.1    UFQT01000229    SSX22081.1    AMQN01016558    KB292190    ELU17976.1    CVRI01000047    CRK97853.1    CH933808    EDW10476.2    KRG05276.1    ABJB010013070    ABJB010083924    ABJB010383163    ABJB010751476    ABJB011073065    DS825131    EEC11911.1    AHAT01015168    CH916375    EDV98315.1    AFYH01041495    AFYH01041496    AFYH01041497    AFYH01041498    AFYH01041499    KQ041821    KKF22034.1    GG666538    EEN57740.1    AERX01002759    KX756656    ASA69199.1    RJVU01069130    ROI74347.1    KK116405    KFM67708.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000002358    UP000007266    + More
UP000076858    UP000000305    UP000053825    UP000002320    UP000075901    UP000008820    UP000075882    UP000007062    UP000075903    UP000075840    UP000076407    UP000091820    UP000075881    UP000085678    UP000075920    UP000014760    UP000183832    UP000009192    UP000257160    UP000001555    UP000018468    UP000264800    UP000001070    UP000008672    UP000261360    UP000261460    UP000265100    UP000264840    UP000265040    UP000265160    UP000001554    UP000264820    UP000261640    UP000265020    UP000261440    UP000005207    UP000054359    UP000265140   

PRIDE

H9J2T5   

Pfam

PF08513   LisH        + More
PF00501   AMP-binding
PF13193   AMP-binding_C

Interpro

IPR006594   LisH        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR016024   ARM-type_fold       
IPR033270   VPRBP/DCAF1       
IPR036322   WD40_repeat_dom_sf       
IPR011989   ARM-like       
IPR001680   WD40_repeat       
IPR000873   AMP-dep_Synth/Lig       
IPR020845   AMP-binding_CS       
IPR025110   AMP-bd_C       
IPR018247   EF_Hand_1_Ca_BS       

SUPFAM

SSF48371   SSF48371        + More
SSF50978   SSF50978       

Gene 3D

2.130.10.10     1.25.10.10    

ProteinModelPortal

H9J2T5   A0A3S2PEH5   S4PF91   A0A212F5C9   A0A194Q0X0   A0A069DY73   + More
K7IMJ1   A0A224XHV9   A0A146LRX2   A0A146KJI0   D6WJD4   A0A0P5Z8X9   A0A0P6D1V7   A0A0P5MKG0   A0A0N8AD33   A0A0P5K0R4   A0A0P5JXW4   A0A0N8BGJ6   A0A164KEF0   A0A0P6CVD7   A0A0P5QVM6   A0A0P6E9P6   A0A0P6FZA4   A0A0P5Q4R1   E9GVW2   A0A0P6CHP2   A0A0P5XZB4   A0A0P5N8F4   A0A0P5NAL5   A0A0P5YES2   A0A0P6E2L8   A0A0L7RH82   B0X6E2   W4VRK8   A0A182SUR4   A0A023EWE5   Q17PN7   A0A1S4EVD4   T1J9J0   A0A182KT44   Q7PZX5   A0A182VKI7   A0A182HPP5   A0A131XYM6   A0A182X032   A0A1A9WIG1   A0A182K226   A0A336LYJ1   A0A1S3K840   A0A1S3K7Q1   A0A182WD69   R7VL56   A0A1J1IC47   B4KS40   A0A3Q1BNF8   A0A0Q9XA42   B7PZ89   W5N7K9   A0A3Q3B1R8   B4JWH7   H3B9R8   A0A3B4WWW4   A0A3B4F330   A0A3P8R4X5   A0A0F8AIJ7   A0A3Q3BQQ8   A0A3Q1HXL7   A0A3P9DAF2   C3YPF6   A0A3Q3DWD7   A0A3Q3S4D7   A0A3Q2CXL5   A0A3B4DRT9   I3KLA0   A0A2Z2L0N8   A0A3N0XMC5   A0A087TRG9   A0A3P8YQZ6  

KEGG

101735741    K11789 HIV-1 Vpr-binding protein [EC:2.7.11.1] | (RefSeq) protein mahjong

GO

GO:0016567   GO:0080008   GO:0005634   GO:0003746   GO:0003824   GO:0035212   GO:1990245   GO:0030331   GO:1990244   GO:0005488   GO:0003676   GO:0008017   GO:0006886   GO:0005515   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR13129  

Length:

566

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2659

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00079

outside

1  -  566

 

 

Pi

324.821544

Theta

174.323713

Tajima's D

2.201421

CLR

0.132398

CSRT

0.911454427278636

Interpretation

Uncertain