Gene

KWMTBOMO14745

Pre Gene Modal

BGIBMGA003823

Annotation

PREDICTED:_EP300-interacting_inhibitor_of_differentiation_3-like_[Bombyx_mori]

Location

Bomo_Chr24(-):14055233-14065411      View in EpiBrowser

Full name

Non-structural maintenance of chromosomes element 4      

Location in the cell

Cytoplasmic   Reliability : 2.398

CDS

ATGAGTACCGCGGAATTAAACTCATCTCAGCGGAAAAGCAAGTACATTAGTATGTACGAAACTGTAACTGCTCTAGAAGATCAAAATGCGAGCAATCAAGAATGTCTAGATGTTACACACAAAGTTGTGAAAGAGGCAAAGCAACTGGTCCAGGAAGGAGGTGTTGACCATCGCAGCAAACATCCTGGTGAGGGATTGCTGGACGCTCGGGTCCTCCACGCATCTTCGAACCTAGCGAAGATGTGCCTCGAGACAGTTGATGTGAACATGCATTTATATGACAAGAACCAATTAGCACAGCACATTAAAAATAAACCTGATTTCTGGGATTTCACGTATCCATTAGAAGTCCCAGCGGTTTCATATTTATATGGCGCCGGGACGTTACAAGTCAGCTTACCATCAAGTACACGGTCTAGTCAATCGAGATCCCGGGTCGTAGTTCAACACGCCCAGATGAGGGTTCCAAAAAATGTGGACAAAGTTCAACAGATCGAGAACGGCCCAGAACTTGTGAGCCGAGTCGATCACTTCATCAAGAAGCAATATAAGCTGAACGGTCGCCGTCCGCTGAGCTATTACAGCGTGGTCCTCGATCCGGATTCGTTCAGCAAGACCGTCGAGAACATATACTACGTGTCGTTTCTTGTGCACGACGGCTTGGTGGCTGTCGAATTAGATGAAACTTACGGTCTCCCGTTCATATCGCCACGCGAAGCGCCCAGGGACAACGACGGCGCGCTTCACGACAACCAGATGATCATGTCAATAGATATGAAAATGTGGAAGGAATTAATCGAAGTATTTCAGATCAGTAAACCGCTGATGGTGATCAAGAGGCTGTGA

Protein

MSTAELNSSQRKSKYISMYETVTALEDQNASNQECLDVTHKVVKEAKQLVQEGGVDHRSKHPGEGLLDARVLHASSNLAKMCLETVDVNMHLYDKNQLAQHIKNKPDFWDFTYPLEVPAVSYLYGAGTLQVSLPSSTRSSQSRSRVVVQHAQMRVPKNVDKVQQIENGPELVSRVDHFIKKQYKLNGRRPLSYYSVVLDPDSFSKTVENIYYVSFLVHDGLVAVELDETYGLPFISPREAPRDNDGALHDNQMIMSIDMKMWKELIEVFQISKPLMVIKRL

Description

Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.

Subunit

Component of the SMC5-SMC6 complex.

Similarity

Belongs to the NSE4 family.

Uniprot

A0A194Q724   A0A2H1WAW9   A0A2W1BEU3   A0A194R694   S4PH42   A0A212F591   + More
A0A2J7RH68   D6WD31   A0A067QSC2   Q17L74   A0A1S4EYX6   A0A1B6K1M1   U4UXW4   A0A1A8EIG0   A0A1A8SCS9   A0A1A8APY1   A0A1A8J9C6   A0A1Q3F028   A0A1A8QVI1   J3JVL8   B0WSU2   N6TF08   A0A1A8PG85   A0A0M9A8S1   A0A154P1D9   A0A210R2F1   A0A0L0CF60   A0A088AMD1   R7TXV7   A0A3Q3IUE9   A0A023EMZ8   A0A2P2I9A4   A0A3B4BTE0  

Pubmed

26354079    28756777    23622113    22118469    18362917    19820115    + More
24845553    17510324    23537049    22516182    28812685    26108605    23254933    24945155   

EMBL

KQ459580    KPI99195.1    ODYU01007136    SOQ49644.1    KZ150209    PZC72224.1    + More
KQ460685    KPJ12760.1    GAIX01005930    JAA86630.1    AGBW02010216    OWR48908.1    NEVH01003746    PNF40183.1    KQ971312    EEZ98330.2    KK853657    KDR02398.1    CH477218    EAT47421.1    GECU01002354    JAT05353.1    KB632410    ERL95206.1    HADZ01010723    HAEA01016389    SBQ44870.1    HAEI01013583    SBS16052.1    HADY01018609    HAEJ01016649    SBP57094.1    HAED01019810    HAEE01016199    SBR06302.1    GFDL01014135    JAV20910.1    HAEH01013485    SBR97522.1    BT127286    AEE62248.1    DS232076    EDS34052.1    APGK01040556    KB740983    ENN76353.1    HAEF01020584    HAEG01007832    SBR80276.1    KQ435711    KOX79537.1    KQ434796    KZC05746.1    NEDP02000715    OWF55260.1    JRES01000575    KNC30139.1    AMQN01010430    KB307802    ELT98574.1    GAPW01002840    JAC10758.1    IACF01004988    LAB70575.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000235965    UP000007266    UP000027135    + More
UP000008820    UP000030742    UP000002320    UP000019118    UP000053105    UP000076502    UP000242188    UP000037069    UP000005203    UP000014760    UP000261600    UP000261440   

Pfam

PF08743   Nse4_C        + More
PF15412   Nse4-Nse3_bdg

Interpro

IPR014854   Nse4_C        + More
IPR027786   Nse4/EID       
IPR029225   Nse4_Nse3-bd       

ProteinModelPortal

A0A194Q724   A0A2H1WAW9   A0A2W1BEU3   A0A194R694   S4PH42   A0A212F591   + More
A0A2J7RH68   D6WD31   A0A067QSC2   Q17L74   A0A1S4EYX6   A0A1B6K1M1   U4UXW4   A0A1A8EIG0   A0A1A8SCS9   A0A1A8APY1   A0A1A8J9C6   A0A1Q3F028   A0A1A8QVI1   J3JVL8   B0WSU2   N6TF08   A0A1A8PG85   A0A0M9A8S1   A0A154P1D9   A0A210R2F1   A0A0L0CF60   A0A088AMD1   R7TXV7   A0A3Q3IUE9   A0A023EMZ8   A0A2P2I9A4   A0A3B4BTE0  

KEGG

101744464    K22825 non-structural maintenance of chromosomes element 4 | (RefSeq) EP300-interacting inhibitor of

GO

GO:0006310   GO:0030915   GO:0006281   GO:0005634   GO:2001022  

PANTHER

PTHR16140  

Subcellular location

Nucleus  

Length:

281

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0366600000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04446

outside

1  -  281

 

 

Pi

253.708738

Theta

169.245568

Tajima's D

1.876258

CLR

0.188688

CSRT

0.859757012149392

Interpretation

Uncertain