Gene

KWMTBOMO14738

Pre Gene Modal

BGIBMGA003826

Annotation

PREDICTED:_ubiquitin-associated_domain-containing_protein_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr24(-):13914749-13916051      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.441 Nuclear   Reliability : 1.607

CDS

ATGCTGGTACCCGATACCGGTCTGAGCAACGAGATCCTAGTCAAGGTCATCAGTCCCGAAGGGCAGACGTACGTGGCGAACTTCCAAGAGAACACCCTTATAGAAGAGGTGAAATTGAAAGCCATCGGTCATTTCTATCCCGATGGAGAAACCAGTTTGGGCCGATACAAAATAATTCGCGTACTCGACGCGAAGACCCTACATGAGTTCCTGACGCTTTTCCAAGAAGAAATCACTACACAGGAGGAACTAATGCTTGTTGAGAGGCGGATACCGGACGCGGGAGCGCTGTGGGATCTTGGGGCGGTCAGGGCGCCGCAACAGAGCACTATAGCGGCAGTCACGGCCTCATTACCGACCCCACAGAGCACGGTGAGGCAACCTAACCTACAATCATTGTTATCGACAAACGAACTATCCTTCGAGCTACGAAAGATCCTGATATCCCTCATCGAAGCCGGCGCAAGACTGGCGGCGGCCGGCCGTAATTACGAGTCGTCTTTGGCTCAACTCTGCGCGGCTCTGGACCAGCCGAAGAGAGCTCAACAGACCCTGATTCAAGTGATTACTCCAGAAGAAATAGCGGCCCGACTCAGCGAACAACAATCGCGCGAAGAAGAACCCTCGACCTCTGAGAAATCGAACGCGAACGACCTATACGAGCGAGCCGGACATTTGCAACGGTTTTTGGAGAAGTTTCGAGAATGGAGGGTCAAGATCGCCGATCCTCCTACTCCGGAAGCGATGGCCGCGTTGATGGACCTGGGTTTTTCACACGATGACGCAGATAGAGCGTTGAGGAACACGGGGTGTAATGTGGCCGCCGCTGCTTCTTGGCTGGTCGGGGATAGGGGGTCAAGTGTCTTTGAGTTAGTAGACGGCCTGCCCGATGGTCCTATACTGCAGTCTTTACTAAAGCAGCCTCAGATCCAACGAGGTCTGCTTAATACGAGGATGCTGATAGCTTTCATAGCTATGGTCGGTCAAAGCGGAAGCGCGACGCTGTGGCTGAACTCCCCTCACGGGAGTCCGCTGCTGTCTCAAATCTCGAGAACATATCATTCCGAGAAGTACTGCTCGGCCGTGAATCAGTTCTCGAACGAGATGGAACAGATTAATCCGTCGACTTCTAGAATGTGA

Protein

MLVPDTGLSNEILVKVISPEGQTYVANFQENTLIEEVKLKAIGHFYPDGETSLGRYKIIRVLDAKTLHEFLTLFQEEITTQEELMLVERRIPDAGALWDLGAVRAPQQSTIAAVTASLPTPQSTVRQPNLQSLLSTNELSFELRKILISLIEAGARLAAAGRNYESSLAQLCAALDQPKRAQQTLIQVITPEEIAARLSEQQSREEEPSTSEKSNANDLYERAGHLQRFLEKFREWRVKIADPPTPEAMAALMDLGFSHDDADRALRNTGCNVAAAASWLVGDRGSSVFELVDGLPDGPILQSLLKQPQIQRGLLNTRMLIAFIAMVGQSGSATLWLNSPHGSPLLSQISRTYHSEKYCSAVNQFSNEMEQINPSTSRM

Similarity

Belongs to the CAMSAP1 family.

Uniprot

H9J2T9   A0A2W1B939   A0A212F543   A0A2A4IYK9   A0A194R5H3   A0A2H1X398   + More
A0A067RRF0   E0VFN3   E2BAA7   A0A2J7R702   A0A1B6FPC1   A0A1B6I6Q6   A0A1B6KU45   A0A195DMW9   A0A195BHE2   A0A195F0E4   A0A1B0CN76   U5EZR9   K7IM17   K1R293   W8ALZ2   A0A0A1XS20   A0A0L0CME3   A0A0J7KI88   A0A0K8ULK8   A0A034WAF0   A0A0A1WNG0   A0A1I8PEA4   A0A0K8U6U2   A0A026W529   A0A034W6U6   A0A1I8PEI9   A0A1I8MHI5   A0A3L8E2C4   A0A1A9UZE4   A0A154PIC7   A0A1B6M4H6   A0A1A9X9R5   A0A1B0ARS1   A0A1A9WV13   A0A1W7RBY6   A0A2P8Y4Q7   A0A1B0FPJ6   A0A2Y9NIR6   H0XB85   B4JWC2   A0A3Q7WAQ7   B5E007   A0A1A9ZR58   A1ZBP3   G3WN49   A0A3Q7QWX1   Q8IHD7   A0A3B0JQ67   M3WE42   B3NJU0   L8YDJ0   A0A3B0J2Q5   E2QZU3   B4KRJ9   A0A2Y9T2J0   A0A1S2ZM85   A0A384B4H0   A0A2A3E0Z5   A0A3Q7NB07   L8J1Y6   A0A0B4KFW5   Q86LF0   B4PB53   B4HPR4   A0A3B0J275   B4LPZ7   A0A0J9RGX5   B4QE55   A0A1W4VGW0   A0A1W4V4M9   A0A2Y9J9E2   A0A2U3WNV5   F6V767   G1L9Z7   K9IXM8   A0A2K6MEM8   A0A195CER0   A0A2C9LWK4   V9KNI0   A0A2K6MEL8   B4MRT3   F7E1G0  

Pubmed

19121390    28756777    22118469    26354079    24845553    20566863    + More
20798317    20075255    22992520    24495485    25830018    26108605    25348373    24508170    25315136    30249741    26358130    29403074    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    21709235    17975172    23385571    16341006    22751099    26109357    26109356    17550304    22936249    18464734    20010809    15562597    24402279    17495919   

EMBL

BABH01036869    KZ150209    PZC72219.1    AGBW02010257    OWR48855.1    NWSH01005009    + More
PCG64498.1    KQ460685    KPJ12764.1    ODYU01013087    SOQ59769.1    KK852470    KDR23195.1    DS235123    EEB12189.1    GL446696    EFN87362.1    NEVH01006738    PNF36614.1    GECZ01029802    GECZ01017906    JAS39967.1    JAS51863.1    GECU01025119    JAS82587.1    GEBQ01025203    JAT14774.1    KQ980713    KYN14250.1    KQ976467    KYM84189.1    KQ981905    KYN33589.1    AJWK01019876    GANO01000275    JAB59596.1    JH817068    EKC35250.1    GAMC01021075    GAMC01021072    JAB85483.1    GBXI01000515    JAD13777.1    JRES01000195    KNC33377.1    LBMM01007190    KMQ89954.1    GDHF01024727    GDHF01000055    JAI27587.1    JAI52259.1    GAKP01007675    JAC51277.1    GBXI01014081    JAD00211.1    GDHF01029937    GDHF01010393    JAI22377.1    JAI41921.1    KK107483    EZA50134.1    GAKP01007676    JAC51276.1    QOIP01000001    RLU26844.1    KQ434924    KZC11611.1    GEBQ01009151    JAT30826.1    JXJN01002559    GDAY02002813    JAV48654.1    PYGN01000933    PSN39238.1    CCAG010011595    AAQR03116416    AAQR03116417    CH916375    EDV98260.1    CM000071    EDY69267.2    AE013599    AAM68425.1    AEFK01023028    AEFK01023029    AEFK01023030    BT001297    AAN71052.1    OUUW01000001    SPP75486.1    AANG04001725    CH954179    EDV55241.2    KB362898    ELV13149.1    SPP75485.1    AAEX03006765    CH933808    EDW10425.2    KZ288467    PBC25395.1    JH880428    ELR61644.1    AGB93630.1    BT004899    AAF57527.2    AAO47877.1    CM000158    EDW91466.2    CH480816    EDW48632.1    SPP75484.1    CH940648    EDW60320.2    CM002911    KMY95172.1    CM000362    EDX07842.1    ACTA01100476    GABZ01006379    JAA47146.1    KQ977935    KYM98711.1    JW867252    AFO99769.1    CH963850    EDW74822.2   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000027135    UP000009046    + More
UP000008237    UP000235965    UP000078492    UP000078540    UP000078541    UP000092461    UP000002358    UP000005408    UP000037069    UP000036403    UP000095300    UP000053097    UP000095301    UP000279307    UP000078200    UP000076502    UP000092443    UP000092460    UP000091820    UP000245037    UP000092444    UP000248483    UP000005225    UP000001070    UP000286642    UP000001819    UP000092445    UP000000803    UP000007648    UP000286640    UP000268350    UP000011712    UP000008711    UP000011518    UP000002254    UP000009192    UP000248484    UP000079721    UP000261681    UP000242457    UP000286641    UP000002282    UP000001292    UP000008792    UP000000304    UP000192221    UP000248482    UP000245340    UP000002279    UP000008912    UP000233180    UP000078542    UP000076420    UP000007798    UP000002280   

PRIDE

H9J2T9    A1ZBP3    Q8IHD7    Q86LF0   

Pfam

PF00627   UBA        + More
PF00160   Pro_isomerase
PF17095   CAMSAP_CC1
PF10523   BEN
PF08683   CAMSAP_CKK
PF00651   BTB
PF11971   CAMSAP_CH

Interpro

IPR009060   UBA-like_sf        + More
IPR015940   UBA       
IPR029000   Cyclophilin-like_dom_sf       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR041927   UBA2_UBAC1       
IPR029071   Ubiquitin-like_domsf       
IPR000626   Ubiquitin_dom       
IPR041926   UBA1_UBAC1       
IPR006636   STI1_HS-bd       
IPR038209   CKK_dom_sf       
IPR001715   CH-domain       
IPR036872   CH_dom_sf       
IPR014797   CKK_domain       
IPR032940   CAMSAP       
IPR022613   CAMSAP_CH       
IPR011333   SKP1/BTB/POZ_sf       
IPR011033   PRC_barrel-like_sf       
IPR018379   BEN_domain       
IPR031372   CAMSAP_CC1       
IPR000210   BTB/POZ_dom       

SUPFAM

SSF46934   SSF46934        + More
SSF50891   SSF50891       
SSF54236   SSF54236       
SSF47576   SSF47576       
SSF50346   SSF50346       
SSF54695   SSF54695       

Gene 3D

2.40.100.10     3.10.20.360    

CDD

cd14304  UBA2_KPC2
cd14303  UBA1_KPC2

ProteinModelPortal

H9J2T9   A0A2W1B939   A0A212F543   A0A2A4IYK9   A0A194R5H3   A0A2H1X398   + More
A0A067RRF0   E0VFN3   E2BAA7   A0A2J7R702   A0A1B6FPC1   A0A1B6I6Q6   A0A1B6KU45   A0A195DMW9   A0A195BHE2   A0A195F0E4   A0A1B0CN76   U5EZR9   K7IM17   K1R293   W8ALZ2   A0A0A1XS20   A0A0L0CME3   A0A0J7KI88   A0A0K8ULK8   A0A034WAF0   A0A0A1WNG0   A0A1I8PEA4   A0A0K8U6U2   A0A026W529   A0A034W6U6   A0A1I8PEI9   A0A1I8MHI5   A0A3L8E2C4   A0A1A9UZE4   A0A154PIC7   A0A1B6M4H6   A0A1A9X9R5   A0A1B0ARS1   A0A1A9WV13   A0A1W7RBY6   A0A2P8Y4Q7   A0A1B0FPJ6   A0A2Y9NIR6   H0XB85   B4JWC2   A0A3Q7WAQ7   B5E007   A0A1A9ZR58   A1ZBP3   G3WN49   A0A3Q7QWX1   Q8IHD7   A0A3B0JQ67   M3WE42   B3NJU0   L8YDJ0   A0A3B0J2Q5   E2QZU3   B4KRJ9   A0A2Y9T2J0   A0A1S2ZM85   A0A384B4H0   A0A2A3E0Z5   A0A3Q7NB07   L8J1Y6   A0A0B4KFW5   Q86LF0   B4PB53   B4HPR4   A0A3B0J275   B4LPZ7   A0A0J9RGX5   B4QE55   A0A1W4VGW0   A0A1W4V4M9   A0A2Y9J9E2   A0A2U3WNV5   F6V767   G1L9Z7   K9IXM8   A0A2K6MEM8   A0A195CER0   A0A2C9LWK4   V9KNI0   A0A2K6MEL8   B4MRT3   F7E1G0  

PDB

3IHP     E-value=0.0446095,     Score=86

KEGG

101742145    no KO assigned | (RefSeq) uncharacterized LOC101742145

GO

GO:0003755   GO:0005794   GO:0005829   GO:0005886   GO:0005516   GO:0031175   GO:0030507   GO:0005874   GO:0008017   GO:0005515   GO:0006457   GO:0006605   GO:0006886   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR21595  

Length:

379

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.6374

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.01745

outside

1  -  379

 

 

Pi

254.548747

Theta

216.849451

Tajima's D

0.518914

CLR

0.127976

CSRT

0.522273886305685

Interpretation

Uncertain