Silkworm Genome Informatics Database

Gene

KWMTBOMO14717

Pre Gene Modal

BGIBMGA007296

Annotation

reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr24(-):13576024-13612397 View in EpiBrowser

Full name

PiggyBac transposable element-derived protein 3       + More
Chimeric ERCC6-PGBD3 protein
PiggyBac transposable element-derived protein 1
PiggyBac transposable element-derived protein 4

Alternative Name

Chimeric CSB-PGBD3 protein
Cerebral protein 4

Location in the cell

Nuclear Reliability : 3.566

CDS

ATGTCTAAACGGTTGGCAGAGCAAGATATTGAAAATATTTTATCAGTTCTCGAAAATGGAGACATTTCTGAAGATGAAGAGTCTATAGGAGACGAAAATGACATAGATTACTACTCGACTGTACAAGATCTGATACAGGATTTAGAAGATGCAGAAGAAGATCAGTACAATGCAAATCCTGATGTACCTATTGAAGAAGACCATCTACCGGATGAGTTTTCAGTTCCAGGGCCTTCACTTAGTCGCCCACTATCAGGTGTCATTGGTGCAGCAGCCTTGAGGCAACGAAGTAGGCAACTTATATGGAAAAAAGGCAATTTGGAATTTAGTGAAGACCGCATAAGTTTTACAGGTAATACAGACCTTTCCCCAGAATTTGCCCAACTAGAAACACCATTTCAGTATTTTACGCTATTTTTAAACGATGATATATTAGTAAAAATCGTGAATGAGACCAATTTGTATATCACGCAAAAAGGCATCTCCAACTGCCCTCCTGTAAATGTCAAGGAAATTCGTCAGTTTCTTGGTATTATTATATTTATGTCAGTATATCACTTCCCAAATGTAAGATCATATTGGGGTAAGTATGGCTTCAAACATATAATGGAAACGATGACGCTAAATAGATTTGGAAAACTACGATCCGTCATTCACTTCAATGACAACTCATTACACAAGCCCGTTGGTCACCCAAACCACGACCGTCTGCATAAAATAAGACCTGTAGAGGCACATTTGAATAAATTATTTTTGAGTGTGGCACCATTTGAGCAGAGACTGTCCTTAGATGAACAGATGTGCTCTACGAAAGTAGCGCATTTCATGAAACAATACCTCCCCAACAAGCCCCATAAGTGGGGTTTCAAGCTATACGTTCTGTGCTCATTGTCTGGTTACGCTCACAATTTTGAAATTTATTCTGGAAAACAGGATATTCAATACTCAAGTGATGAACCTGATCTTGGTGTAGTAGGCAACACAGTCATCAGATTGTGCCGTTCAGTTCCACGAAGAATGAACCACATAATTTATTTTGATAATTTTTATTCGTCAATTCCTTTGTTATATTACCTACATACTCAAGGTATATATGCATTGGGCACAATTCAGAGGAACCGACTCGGTAAAACCTGTAAGTTGCCGGTAGTAAAAGAGTTTATGAAGGACTCTGTTCCAAGGGGATCATATGAGGAACTCGTAGCAGACTATGAAGGTGTGGATATCTCGGTAACTTGTTGGAAGGATAATAAGCTTGTTACGTTGGTATCTACTTATGTTGGTTCCGAACCGGCTGAAACTGTCAGCAGATTTGATAAGAAACAAAAGAAAAAGGTCTCTGTTGCCTGTCCAAAAATTGTAAAAGATTACAATGCCCACATGGGTGGAGTAGATTTGATGGACAGTTATTTGGGCCGCTACAAAATTCGAATCGAAAGTCGAAAATGGGGACTCGCCTTTCGGCGAGTTTGCTTTAAGTCCCGGGGACGCCCCCCCCGGGCACACGTCACCATGAGTGACGCCAACGATGCGCTCTTCATTAAGTTCGTCCGCGACTTCTGTCCGGACATAGTCGCACGCTTCGAAGTTTACAAGGCCGGCCTTGACGCGCCGGCACTCCGAGACTCTCCGTTGTCGCCCCCCGCGCCGGTACCTCGCGACTCGCCACTGTCGCCCCCCACCCCCGCGCCCGTGTCAATCGCGTCCTCCGTAGCAGTAAGCTCCGGCTCCGACTCCGAGTCGGAAATGGAGTACGAGTCCACCGCGAGTCCTCAACCGGGAACCTCGGAAGGGTTCACCACCGTCGCGCGCGGCAAAAAACGCGCCCGCGCTGTGGATCCACCCACGGCGCCCAAACAACCCAAGGCCGCGAACGCCTCGCGGCCTAAGACCGTTATAACCCCGGAATCCCCTCGCCGCGCAACCCCGTCGCCGCGCCCCGGGCCCGCGCCCGTCCGAAAAGTTCCCGCGCCGCCGCCGGTCATCCTGCGGGAAAAGTCTTCGTGGGATCGCGTATCCCTGGCCCTTAAGGCCCAAAAGATAAATGTAGTCCATGCACGAAATATCCCGGATGGAATACAAATCAAGGTCGAAACATCAGACGACCATAGGTCATTGACCGCATACCTCCGCAAGGAACGCATAGGTTATCATACCTATGCGCTCCAGGAGGAGCGTGAACTCCGCGTCGTAATACGCGGAGTCCCAAAAGAGCTCGACGTCGAGCAAATTAAGAATGACCTGGTAGGTCAGTCCTACCCCGTCATAAGTGTGCACCGGATGCACAGCGGGCGCGACAAATTCGCGTATGATATGGTGCTCGTAGCACTAGAAGCCACACCGGAGGGCAAGAAAATTGCCTCATGTCTCCGCACCGTGTGCGGCCTATCGGGGGTCACCGTAGAGGCCCCCTACAAACGCGGCACTCCCGGGCAGTGCCACCGTTGCCAGCTCTATGGCCACTCCGCGCGTAACTGCAAAGCGCGACCGCGTTGCGTGAAGTGTTTAGACGATCACGCGACCACCGATTGCTCGCGCGTAAAGGAGACAGCGACGGAGCCGCCGAGCTGTGTACTCTGCCGCAAGCAGGGACACACGGCCAACTACCGTGGATGCCCCAAGGCTCCACGGAAGCGCCCGGCAAACGCGCCCCCTAAAACCGCTGGCCCAAAGACTTCGGCGCCCCGCGCGCCGAAACCGGCTTTCGTACCGGCTCCGGTGCCCACCGTCTCCGCGTGGGCAAAACCGTTGCCGTTCACGAAGGCAGGAACGACACCGGCGCCCCAACCGCGATACGCGCCGCAACCTCTACTCGCGCCGCGCCCCGCCCCCGCCCCCGCCCCCGCGCCTCGCCCCGCCCCCGCGCACTCAAACGACTTCTCGATCATACGAGATTACATCGCCGCTATAAACATAGACCGCATGCAAAACGAGAACCCCGCGTTGTTCGCGAAATTCGTCCGTGAGTACTGCCCGGACATTATGTCAAAGTTTAGGGCGTACAAAGCCAGTCTAGCATCGAACCCCGACGATTCGTCCGCCGCCGCCGCGATAATCCGAGACTCTCCGCTGTCGCCTCCCGCGCCGGTACTCCGCGACTCGCCGATGTCGCCCCCCACCCCCGCGCCCGCGTCGATCGCGTCATTCGCGGCATCGAGCTCCGGCTCCAACTCCGAGTCGGAGATGGAGTTCGAGTCGGCCGCCAGCCCCGAACCCGGAACCTCCGATGGGTTCAAAACCGTCACGCGCGGTAAGAAACGCGCCCGCGCCGTGGAACCGTCCGCGGCGCCGAAACAACCCAAGGCCGCGAACGCGTCGCGGCCTAAAGTCGTGGCACTCAACGTCAACGTCGTCCATGCGCGTAACATCGCGCACGGCATACAAATTAAGACGGCCTCACCGGACGATAACAGGGCGCTGACAGCCCACCTCCGTAAGGAGCGCATAAGCTTCCACACTTATGCGCTCCAGGAGGATCGCGAGCTCCGCGTAGTAATACATGGAGTACCGAAGGAGCTCGACGTCGAGCTAGTCAAGGAGGACGTCGAGCTAGTCAAGGAGGACCTCATCGGGCAGGCGTACCCGATTATAAGCGTGCACCGAATGCACAGCGGCCGAAATAGGTTCCCATTCAATATGGTTCTCGTCGCGCTAGAACAAACTCCAGAAGGCAAACGGATTGCCTCAAGTCTCCGCACCGTTTGCGCATTCTACAATGCTAACGGACTCGCGCGTCAGCGCGACCAGGTTTATGAGTTTCTCCGCGAAAATCTCATCGACATCCTTCTGTTGCAGGAGACCTTCCTAAAGCCCTCGCGTCGCGACCCCAAAGTCGCGAATTACGTCATGGTTAGGAATGACAGACTCTCCGCCCCCAAGGGCAGGACTGTCATTTACTATAGGAGGGCCCTGCACTGCGTCCCTCTCGATACTCCCTCGCTCTTACATATCGAGGCGTCAGTGTGCCGCATCGCGCTGACGGGACACCAGCCGATCGTCATCGCATCCGTCTATCTCTCCCCTGACAAACCCCTCCTGAGCAGTGACCTCGAGACACTGCTCGACCACCGACCTGTCGTCATGCAGCTCGGTCGCCCACTCAACCGCGAACCAGATACGAGGACCATGGTGGATTGGAAGAAGCTGGGCACGTGCTTAGCTGACACCGCTCCACCAATCCTCCCTCGCGGCCCGGATTCAACTCCATCCCCCGAGGACACAGTCGAATCCATAAACATCTTCACTGATCACGTCTCGACGGCGATCATAAGATCTTCAAAGCAAGTCGATGTGGAGGACTGCTTCCACCGCATCAGACTTTCCCCCGATCTTAGAGACCTCAGGACTCACCTTTCGGCGAATTACATAAGTCCCGGGGACGCCCCCCCCGGGCACCCCTTCAAAATGACGGACGAGGACAGCGCGCTGTTCTCACTATTCGTCCGCGAATTCTGCCCGGACATGTCCCGTTTCGAGGCCTACAAGGCCAACCTAGATAGCTTTTCTAAAGGAGATTGTTTGGTGACGCACTCGCCGCCGATTATGCGTGGCGATGTGACCTTCGCGACAGGGGGGAACCACGTCCCGGAGAAGGAGCGATTAGAGCGCGGAGGCTCCAATCTCGGCGATATTCGGAGTCATTTGGAAGGCAAAGCCAAGTTGGCGTCCAAAATGCTGGGAGTCCTCAACAGAGCGAAGCGGTACTTCACGCCTGGACAAAGGCTTTTGCTTTATAAAGCACAAGTCCGGCCTCGCGTGGAGTACTGCTCCCATCTCTGGGCCGGGGCTCCCAAATACCAGCTTCTTCCATTTGACTCCATACAGAGGAGGGCCGTTCGGATTGTCGATAATCCCGGTCTCACGGATCGTTTGGAACCTCTGGGTCTGCGGAGGGACTTCGGTTCCCTCTGTATTTTGTACCGTATGTTCCATGGGGAGTGCTCTGAGGAATTGTTCGAGATGATACCGGCATCTCGTTTTTACCATCGCACCGCCCGCCACCGGAGTAGAGTTCATCCATACTACCTGGAGCCACTGCGGTCATCCACAGTGCGTTTCCAGAGGTCTTTTTTGCCACGTACCATCCGGCTATGGAATGAGCTCCCCTCCACGGTGTTTCCCGAGCGCTATGACATGTCCTTCTTCAAACGAGGCTTGTGGAGAGTATTAAGCGGTAGGCAGCGGCTTGGCTCTGCCCCTGGCATTGCTGAAGTCCATGGGCGACGGATAGCCGTCGGAGCCCCGTGGTTCGTCAGGAACGTCGACCTCCATGACGACCTGGACTTAGAGTCCATCAGTAAGTATCTACAGTCGGCGTCGATGCGCCACTTCGATAAAGTGGCACGACACGAGAACCCTCTCATCGTGGCCGCCAGTAACTACATTCCCGATCCTGCGGACAGAATGGAAAGCAGTCGACGTCGCCCAAAACACGTCATCTCGGATCCTCCCGATCCACTAACAGTGCTTTTAGGTATCAGATACTCAAGGGGACTCGCCTTTCGGCGAGTTTGCTTTAAGTCCCGGGGACGCCCCCCCCGGGCACACGTCACCATGGGTGACACCAACACCAACGCTGCGCTCTTCTTTAAGTTCGTCCGCGACGTCTGTCCGGACATAATCGCAAAGTTCGAAGCTTACAAGGCCGGCCTTGACGCGCCGGCACTCCGCGACTCTCCGTTGTCGCCCCCCGCGCCGGTACCTCGCGACTCGCCGATGTCGCCCCCCACCCCCGCGCCTGCGTCGATCGCGTCTTGCGCGTCATCAAGCTCCGGCTCCGACTCCGAGTCGGAAATGGAGTACGAGTCCGCCGCGAGTCCCCAACCGGGAACCTCGGAAGGGTTCACCACCGTCGCGCGCGGGAAAAAACGCGCCCGCGCCGTGGAACCGTCCGCGGCGCCGAAACAGCCAAAGGCCGCGAACGCGTCGCGTCCTAAAGTCGTGGTCTCACCCGACTCCCCTCGCCGCGCAACCCCGTCGCCGCGACCCCAACCCGCGTCCGTCCGCAAAATTCCCGCGCCGCCGCCGGTAATTTTGCAAGATAAAACCGCGTGGGATCGCGTATCCCGTGCCTGTAAGGCACAAAACGTCACCGTCATCCATGCGCGTAACATCGCGCACGGTATACAAATAAAAACGGCCTCACCGGACGACCACAGGGCGCTGACAGCCCACCTCCGAAAGGAACGCATAAGCTTCCACACTTATGCGCTCCAGGAGGATCGCGAGCTCCGCGTAGTAATACGCGGAGTACCGAAGGAGCTCGACGTCGAGCTGGTCAAGGAGGACCTCATCAGGCAGGCGTACCCGATTGTAAGCGTGCACCGAATGCACAGCGGGCGCGATAAATTCGCATATAATATGGTTCTCGTCGCGTTAGAACCAACCGCCGAAGGCAAACGGATTGCCTCAAGCCTCCGCACCGTTTGCGGCTTATCCGGGGTCACCGTCGAGGCCCCATATAAAAAAGGCACTCCCGGGCAGTGCCACCGCTGTCAGTTATACGGCCACTCCGCGCGCAACTGCCACGCGCGCCCGCGGTGCGTAAAGTGCCTCGGCGACCACGCGACAGCCGACTGTTCGCGGGTCAAAGAGACAGCGACTGAACCACCGAGCTGTGTGCTCTGCCAGAAGCAGGGCCACACAGCCAACTACCGCGGATGCCCCAAGGCCCCGCGGAAGCGTCTGGCCAACGCGCCTCCAAAAACCGTCGGCCCTAAGACTTCGGCGCCCCGCGCGCCGAAACCTGCCTTCGTGCCGGCACCGCGCGATCAAGTATATGAGTTTCTCCGCGACAATCTCATCGACATCCTTCTGGTGCAGGAGACCTTCCTAAAGCCCTCGCGTCGCGACCCCAAAGTCGCGAATTACGTCATGGTTAGGAATGACAGACTCTCCGCCCGCAAGGGCGGGACTGTCATTTACTATAGGAGGGCCCTGCACTGCGTCCCTCTCGATACTCCCTCGCTCTTACATATCGAGGCGTCAGTGTGCCGCATCGCGCTGACGGGACACCAGCCGATCGTCATCGCATCCGTTTATCTCCCCCCTGACAAACCCCTCCTGAGCAGTGACCTCGAGACACTGTTCGGTATGGGGGACGCGGTCATCCTGGCAGGCGATTTAAATTGCCACCACACTAGGTGGAACTGCCATCGCACGAATGTGAACGGTAGGCGTCTCGACGCGTTCATAGACGACCTCACATTCGAAGTATTCAACCCCCCGACCCCCACGTGCTATCCGTACAACGCCGCGCGTCGTCCGAGCACAATAGATCTGGCACTGCTGAGGAACGTAACTCTGCGCTTACGCTCCATCGAGGCAATGTCAGAACTCGACTCAGACCACCGACCTGTCGTCATGCAGCTCGGTCGCCCACTCAACCGCGAACCAGATACGAGGACCATGGTGGATTGGAAGAAGCTGGGCACGTGCTTAGCTGACACCGCTCCACCAATCCTCCCTTGCGGCCCGGATTCAACTCCATCCCCCGAGGATACCGTCGAATCCATAAACATCTTCACTGATCACGTCTCGACGGCGATCATAAGATCCTCGAAACAAGTCAATGTGGAGGACTGCTTCCACCGCATCAGACTTTCCCCCGAACTTAGGGACCTAGTTAGAATTAGAAACGCGGCAATCCGGGCCTACGATCGATATCCCACGGATTCAAACCGGACTCGGATGCGTCGCTTACAGCGGGAGGTCAAATCCCGCTTAAGCGACGCCCGAAACGAAAACTGGGATAGTTATTTAGAAGAACTCGCGCCCACTCACCAAGCATACTGGCAACTAGCTAGGACCCTCAAGTCCGAAACTATAGCCACTATGCCGCCTCTCGTACGCCCCTCAGGCCAACCACCGGCTTACGATGACGATGACAAGGCAGAGTTGCTGGCCGATGCACTGCAAGAGCAGTGCACCACCAGCACTCAACACGCGGACCCCGAACACACCGAGTTCGTCGACAGGGAGGTCGAGCGCAGAGCTTCCCTGCCGCCCTCGGACGCGTTACCCTCCATTACCACTTCCGAGGTCAAGGAGGCGATCGATAGCCTACAACCACGGAAAGCTCCCGGCTCCGACGGCATCCGCAACCGCGCGCTTAAACTGTTACCAGCCCAACTGATAACGATGTTGGCCACCATATTAAATGCTGCTATGACGAACTGCATCTTTCCCGCGGCGTGGAAAGAAGCGGACGTTATCGGCATACACAAGCCGGGCAAACCGAAGAACGAAACCGCGAGTTACCGCCCCATCAGTCTCCTCCCGGCGATAGGCAAACTATACGAACGGCTCCTTCGTAAACGCCTCTGGGACTTCGTATCCGCGAATAAAATTCTTATAGACGAGCAGTTTGGATTCCGCGCCAGACACTCGTGCGTCCATCAAGTGCACCGCCTCACGGAGCACATCTTACTAGGGCTGAACAGGCGGAAACCCATTCCGACAGGAGCCCTCTTCTTCGATATAGCGAAGGCGTTCGACAAAGTCTGGCACAACGGTTTGATATACAAACTGTATAACATGGGAGTGCCAGACAGACTCGTGCTCATCATACGAGACTACTTGTCGAACCGTTCGTTCCGATATCGAGTCGAGGGAACGCGTTCCCGGCCCCGTCACGTCACAGCCGGAGTCCCGCAAGGCTCCGCCCTCTCCCCGTTACTATTCAGTTTGTATATCAACGATATACCCCGGTCTCCGGAGACCCATCTGGCGCTCTTCGCCGATGACACCGCCATCTACTACTCGTGTAGGAAGAAGGCGTTGCTTCATCGACGACTTCAGACCGCAGCTACCACCATGGGACAGTGGTTCCGGAAGTGGCGCATCGACATTAACCCTACGAAAAGCACAGCGGTGCTCTTCAAAAGGGGTCGCCCTCCGAACACCACGCTGAGCATCCCTCTCCCGACTAGGCGCGTCAATAACCCCGCCCCCGCCGTTCGCCCAATCACGATGTTCGACCAGCCCATACCGTGGGCCCCGAAGGTCAAATATTTAGGCGTCACCCTCGACAGTAGGATGACATTCCGCCCCCACATCAAGACGGTACGCGACCGTGCCGCCTTCATTCTAGGACGTCTCTACCCGATGATATGTAGGCGAAGTAAAATGTCCCTTAGAAATAAGGTGACACTCTACAAAACTTGCATACGCCCCGTCATGACCTATGCAAGTGTAGTGTTCGCTCACGCGGCCCGCATACACTTAAAATCCTTTCAAATTATTCAATCCCGTTTTTGCAGGATAGCCGTCGGAGCCCCGTGGTTCGTCAGGAACGTCGACCTCCATGACGACCTGGACTTAGAGTCCATCAGTAAGTATCTTCAGTCGGCGTCCATGCGCCACTTCGATAAAGCGGCACGACACGAGAACCCTCTCATCGTGGCCGCCGGTAACTACATTCCCGATCCTGCGGACAGAATGGAAAGCAGTCGACGTCGCCCTAAACACGTCATCTCGGATCCTCCTGATCCACTAACGGAGGACCGCGAGCTCCGCGTAGTAATACGCGGAGTTCCGAAAGAACTCGACATAGAGTACGTAAGGGAGGATCTGACCGCTCAGTCCCTCCCGATAGTTAGTGTGCACCGGATGCACAACGGACGCGATAAAAAACCATATAACATGGTTCTAGTCGCTCTAGAACCAACCCCGGAGGCCAAGAAAAAGATCGCATGTCTCGCGACAGTATGTGGCCTATCCGGGGTTACCATTGAAGCCCCCCATAGACGTGGCACTCCCGGACAGTGCCACAGATGCCAACTATATGGCCACTCGGCTCGGAATTGCCACGCGCGCCCCCGCTGCGTGAAGTGTCTCGGCGATCACGCCACGGTAGATTGCTCGCGAGTTAAGGAAACCGCGACCGAACCTCCAAGCTGTGTCCTATGCCTTAAGCAAGGGCACCCCGCGAATTACCGTGGATGTCCTAGGGCTCCGCGAAAACGTCCGACCCACCCAGCCCCCCGTACCGTCGGCCCAAAGACTTCGGTGCCTTCAGCACCGAAACCCGCCTTCGTACCGGCTGCGGTTCCCACCGTCTCGGCGTGGAATAAACCGCTGCCGTATACGAGGTCGGGAACACAAACCGCACCCCAGCCCCCGCTCGCGACACGTCCCGCGCCGCAGCCCCTGCTCGCACCTCCCCCCGCGCCCGCGTACCGTCCCCCGCAACCCTCAGCCGTCAACGACTTCACGCTCGTGCGCGACTTTGTCACGGCGGTCAACTTCGACCGTCTGCGATCGTTCGCAGACGCGTTGAGTCGGAAATGGAATAAGACTTCGCCGCGAGTCCGCAACTCGAAACCTCGGACGGGTTCACTACCGTCGCGCGCGGAGGAACGCGAACTCCGCGTAGTAATACGCGGAGTACCCAAGGAGCTCGATGCCGAGCTAGTCAAGGACGACCTCATCAGGCAAGCATACCCGATAATAAGTGTGCATCGGGTGCACAGCGGTCGCGACAAGTTTCCATACAATATGGTGTATACCATTCCATTCCATACACCGCGGAAAGCCAACGGATTGCCTCAAGTCTCCGCACCGTTTGCGGCCTATCTGGGGTAA

Protein

MSKRLAEQDIENILSVLENGDISEDEESIGDENDIDYYSTVQDLIQDLEDAEEDQYNANPDVPIEEDHLPDEFSVPGPSLSRPLSGVIGAAALRQRSRQLIWKKGNLEFSEDRISFTGNTDLSPEFAQLETPFQYFTLFLNDDILVKIVNETNLYITQKGISNCPPVNVKEIRQFLGIIIFMSVYHFPNVRSYWGKYGFKHIMETMTLNRFGKLRSVIHFNDNSLHKPVGHPNHDRLHKIRPVEAHLNKLFLSVAPFEQRLSLDEQMCSTKVAHFMKQYLPNKPHKWGFKLYVLCSLSGYAHNFEIYSGKQDIQYSSDEPDLGVVGNTVIRLCRSVPRRMNHIIYFDNFYSSIPLLYYLHTQGIYALGTIQRNRLGKTCKLPVVKEFMKDSVPRGSYEELVADYEGVDISVTCWKDNKLVTLVSTYVGSEPAETVSRFDKKQKKKVSVACPKIVKDYNAHMGGVDLMDSYLGRYKIRIESRKWGLAFRRVCFKSRGRPPRAHVTMSDANDALFIKFVRDFCPDIVARFEVYKAGLDAPALRDSPLSPPAPVPRDSPLSPPTPAPVSIASSVAVSSGSDSESEMEYESTASPQPGTSEGFTTVARGKKRARAVDPPTAPKQPKAANASRPKTVITPESPRRATPSPRPGPAPVRKVPAPPPVILREKSSWDRVSLALKAQKINVVHARNIPDGIQIKVETSDDHRSLTAYLRKERIGYHTYALQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVHRMHSGRDKFAYDMVLVALEATPEGKKIASCLRTVCGLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCKARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGHTANYRGCPKAPRKRPANAPPKTAGPKTSAPRAPKPAFVPAPVPTVSAWAKPLPFTKAGTTPAPQPRYAPQPLLAPRPAPAPAPAPRPAPAHSNDFSIIRDYIAAINIDRMQNENPALFAKFVREYCPDIMSKFRAYKASLASNPDDSSAAAAIIRDSPLSPPAPVLRDSPMSPPTPAPASIASFAASSSGSNSESEMEFESAASPEPGTSDGFKTVTRGKKRARAVEPSAAPKQPKAANASRPKVVALNVNVVHARNIAHGIQIKTASPDDNRALTAHLRKERISFHTYALQEDRELRVVIHGVPKELDVELVKEDVELVKEDLIGQAYPIISVHRMHSGRNRFPFNMVLVALEQTPEGKRIASSLRTVCAFYNANGLARQRDQVYEFLRENLIDILLLQETFLKPSRRDPKVANYVMVRNDRLSAPKGRTVIYYRRALHCVPLDTPSLLHIEASVCRIALTGHQPIVIASVYLSPDKPLLSSDLETLLDHRPVVMQLGRPLNREPDTRTMVDWKKLGTCLADTAPPILPRGPDSTPSPEDTVESINIFTDHVSTAIIRSSKQVDVEDCFHRIRLSPDLRDLRTHLSANYISPGDAPPGHPFKMTDEDSALFSLFVREFCPDMSRFEAYKANLDSFSKGDCLVTHSPPIMRGDVTFATGGNHVPEKERLERGGSNLGDIRSHLEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRPRVEYCSHLWAGAPKYQLLPFDSIQRRAVRIVDNPGLTDRLEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKVARHENPLIVAASNYIPDPADRMESSRRRPKHVISDPPDPLTVLLGIRYSRGLAFRRVCFKSRGRPPRAHVTMGDTNTNAALFFKFVRDVCPDIIAKFEAYKAGLDAPALRDSPLSPPAPVPRDSPMSPPTPAPASIASCASSSSGSDSESEMEYESAASPQPGTSEGFTTVARGKKRARAVEPSAAPKQPKAANASRPKVVVSPDSPRRATPSPRPQPASVRKIPAPPPVILQDKTAWDRVSRACKAQNVTVIHARNIAHGIQIKTASPDDHRALTAHLRKERISFHTYALQEDRELRVVIRGVPKELDVELVKEDLIRQAYPIVSVHRMHSGRDKFAYNMVLVALEPTAEGKRIASSLRTVCGLSGVTVEAPYKKGTPGQCHRCQLYGHSARNCHARPRCVKCLGDHATADCSRVKETATEPPSCVLCQKQGHTANYRGCPKAPRKRLANAPPKTVGPKTSAPRAPKPAFVPAPRDQVYEFLRDNLIDILLVQETFLKPSRRDPKVANYVMVRNDRLSARKGGTVIYYRRALHCVPLDTPSLLHIEASVCRIALTGHQPIVIASVYLPPDKPLLSSDLETLFGMGDAVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEVFNPPTPTCYPYNAARRPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQLGRPLNREPDTRTMVDWKKLGTCLADTAPPILPCGPDSTPSPEDTVESINIFTDHVSTAIIRSSKQVNVEDCFHRIRLSPELRDLVRIRNAAIRAYDRYPTDSNRTRMRRLQREVKSRLSDARNENWDSYLEELAPTHQAYWQLARTLKSETIATMPPLVRPSGQPPAYDDDDKAELLADALQEQCTTSTQHADPEHTEFVDREVERRASLPPSDALPSITTSEVKEAIDSLQPRKAPGSDGIRNRALKLLPAQLITMLATILNAAMTNCIFPAAWKEADVIGIHKPGKPKNETASYRPISLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDPLTEDRELRVVIRGVPKELDIEYVREDLTAQSLPIVSVHRMHNGRDKKPYNMVLVALEPTPEAKKKIACLATVCGLSGVTIEAPHRRGTPGQCHRCQLYGHSARNCHARPRCVKCLGDHATVDCSRVKETATEPPSCVLCLKQGHPANYRGCPRAPRKRPTHPAPRTVGPKTSVPSAPKPAFVPAAVPTVSAWNKPLPYTRSGTQTAPQPPLATRPAPQPLLAPPPAPAYRPPQPSAVNDFTLVRDFVTAVNFDRLRSFADALSRKWNKTSPRVRNSKPRTGSLPSRAEERELRVVIRGVPKELDAELVKDDLIRQAYPIISVHRVHSGRDKFPYNMVYTIPFHTPRKANGLPQVSAPFAAYLG

Description

Binds in vitro to PGBD3-related transposable elements, called MER85s; these non-autonomous 140 bp elements are characterized by the presence of PGBD3 terminal inverted repeats and the absence of internal transposase ORF.
Involved in repair of DNA damage following UV irradiation, acting either in the absence of ERCC6 or synergistically with ERCC6. Involved in the regulation of gene expression. In the absence of ERCC6, induces the expression of genes characteristic of interferon-like antiviral responses. This response is almost completely suppressed in the presence of ERCC6. In the presence of ERCC6, regulates the expression of genes involved in metabolism regulation, including IGFBP5 and IGFBP7. In vitro binds to PGBD3-related transposable elements, called MER85s; these non-autonomous 140 bp elements are characterized by the presence of PGBD3 terminal inverted repeats and the absence of internal transposase ORF.

Miscellaneous

PGBD3 gene is located within ERCC6 intron 5.

Keywords

Alternative splicing Complete proteome DNA-binding Nucleus Phosphoprotein Polymorphism Reference proteome Disease mutation Isopeptide bond Premature ovarian failure Ubl conjugation

Feature

chain PiggyBac transposable element-derived protein 3
sequence variant In dbSNP:rs4253072.

Uniprot

Q8N328.3 P0DP91.1 Q96JS3.1 Q96DM1.3

Pubmed

14702039 15164054 15489334 18369450 22483866 23186163 + More
26218421 16959974 17081983 16964243 18691976 18669648 20068231 21406692 28112733 14574404 16572171

EMBL

AK074682 AL138760 BC028954 BC063690 BC034479 D88259 + More
AK223446 AL021997 BC069033 BC128585 AK057200 AK094816 AK289491 AC079203

Proteomes

UP000005640

PRIDE

Q8N328 P0DP91 Q96JS3 Q96DM1

Pfam

PF13843   DDE_Tnp_1_7        + More
PF02023   SCAN
PF13842   Tnp_zf-ribbon_2

Interpro

IPR029526   PGBD        + More
IPR003309   SCAN_dom
IPR038269   SCAN_sf
IPR001190   SRCR
IPR032718   PGBD4_C_Znf-ribbon

Gene 3D

1.10.4020.10

CDD

cd07936 SCAN

ProteinModelPortal

Q8N328.3 P0DP91.1 Q96JS3.1 Q96DM1.3

PDB

6AR3 E-value=0.00276399, Score=105

KEGG

101740227 no KO assigned | (RefSeq) piggyBac transposable element-derived protein 1-like

GO

GO:0043565 GO:0016604 GO:0005654 GO:0045739 GO:0033141 GO:0002230 GO:0010628 GO:0005634 GO:0003700 GO:0005044 GO:0042802 GO:0016020 GO:0003676 GO:0008270 GO:0017038 GO:0006605 GO:0006886 GO:0005515 GO:0003824 GO:0008152 GO:0016491 GO:0015930

Subcellular location

Nucleus

Length:

3527

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.75441000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04420

outside

1 - 3527

Pi

271.857534

Theta

192.760503

Tajima's D

3.07461

CLR

0.208664

CSRT

0.982400879956002

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree