Gene

KWMTBOMO14716  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014598

Annotation

PREDICTED:_THAP_domain-containing_protein_4-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr24(+):13573008-13575246      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.963 Nuclear   Reliability : 1.659

CDS

ATGTCGAAGATTCATGAAGCTTTGGCGCCCATTTCCTGGTTGGAAGGCCGTTGGTCCACAACTGATGGCAGAGGATATTATCCGAACATACCAGACTTTACATATCATGAAGACTTGGAGTTTCTCTGCATTGGACAGCCCATGTACAATTTCCTATCGACGTCAAGGCACCCTGAAAAGCAGACGCCGATGCATCAGGAACGAGGCTTCCTTCGCATCAAGCCTGGGACAAATGAGCTGTCTTTCGTCGTGAGCCACAACTTTGGCCTGACTTCACTCGAAGAGGGACTGTGTGAGACAGAGACACATCAAGTAATTTTAGAAACAGTTAATTTATCTAGAATTTCATTTGCTAAACCACCCTTTGTGAAAAAAATTAAGAGGGTTTTCAAACTACTGAGTGATGATCACTTGGAAGCAACATTGTATATGGAAACTGATACTACACCAATGAGTGAACATTTGAAAGCAGTTTACAAAAAAATTCAATAG

Protein

MSKIHEALAPISWLEGRWSTTDGRGYYPNIPDFTYHEDLEFLCIGQPMYNFLSTSRHPEKQTPMHQERGFLRIKPGTNELSFVVSHNFGLTSLEEGLCETETHQVILETVNLSRISFAKPPFVKKIKRVFKLLSDDHLEATLYMETDTTPMSEHLKAVYKKIQ

Uniprot

H9JYH8   A0A2A4IYY6   A0A2W1BKL0   A0A2H1V841   A0A212EUM5   A0A194Q0S8   + More
A0A194R5H7   A0A2H1WBF8   A0A182XKH0   A0A182LCU8   A0A182PK58   A0A0L7KFK4   U5ESU6   A0A182VXN8   A0A182JZN5   A0A182V5Z3   A0A182HJH4   Q7Q0H8   A0A182U0V7   A0A1B6DRQ0   A0A1Q3F3N3   A0A182SS04   B0X2P7   W5JQP7   A0A182LW67   A0A2M4AWS4   A0A2M4C1X5   A0A2M4C1Z1   A0A182NL82   A0A182FAW2   S4P5L0   A0A2T7NAS2   D6WTT0   T1E906   A0A2M3ZD65   A0A182YIF5   A0A1B6L8V4   A0A336MLJ5   A0A1B6HAA9   A0A1B6GE48   A0A182Q6J4   A0A026WZW3   K7IR91   A0A1S3I2B4   A0A0B6Z6E5   A0A1Q3F3R2   A0A1S3I2B6   A0A2D0SVY2   A0A3Q3JY83   A0A1A8L3G8   A0A1A8QE21   A0A1J1HJQ0   E1ZV30   A0A3Q3M6M1   A0A3Q2CEG8   A0A1A8NUV0   A0A1A8C4J9   A0A1A8DZ19   A0A146VBB3   A0A146VAI4   A0A1A8JXT5   A0A3B4ALT2   A0A3Q2CEP0   A0A3B4U3R5   A0A1A8V3Y1   A0A158P257   F4W6E2   W5KF72   A0A0B6Z3U0   A0A3B4XCJ1   A0A3B4ZW66   A0A3Q0S927   A0A1Y1LC58   A0A3Q1GZL8   V9LCX4   V9LCE7   A0A3Q1B370   A0A3P8SE00   A0A3B3CV70   A0A087XVX4   A0A3B3W1R2   A0A151X022   A0A1A7XIM8   A0A3B1J996   A0A1A8EVX6   A0A315VS22   A0A3Q3FRX1   A0A146NKC9   A0A0S7I7N7   A0A2I4D3G1   A0A3Q3FXQ8   A0A3Q1I8N1   A0A3Q2YBM8   A0A3B3YJA1   A0A3B3RDT2   A0A3B5KSC4   A0A0P7V5H6   A0A1U8C387   M4ANG2  

Pubmed

19121390    28756777    22118469    26354079    20966253    26227816    + More
12364791    14747013    17210077    20920257    23761445    23622113    18362917    19820115    25244985    24508170    30249741    20075255    20798317    25463417    21347285    21719571    25329095    28004739    24402279    29451363    29703783    29240929    23542700   

EMBL

BABH01043559    NWSH01004536    PCG64970.1    PCG64971.1    KZ150209    PZC72213.1    + More
ODYU01001160    SOQ36981.1    AGBW02012340    OWR45189.1    KQ459580    KPI99187.1    KQ460685    KPJ12769.1    ODYU01007535    SOQ50390.1    JTDY01010031    KOB61649.1    GANO01004673    JAB55198.1    APCN01002167    AAAB01008982    EAA14625.2    GEDC01015663    GEDC01009015    JAS21635.1    JAS28283.1    GFDL01012892    JAV22153.1    DS232294    EDS39371.1    ADMH02000775    ETN65079.1    AXCM01011237    GGFK01011922    MBW45243.1    GGFJ01010144    MBW59285.1    GGFJ01010143    MBW59284.1    GAIX01008547    JAA84013.1    PZQS01000014    PVD18273.1    KQ971352    EFA06278.1    GAMD01002283    JAA99307.1    GGFM01005700    MBW26451.1    GEBQ01019834    JAT20143.1    UFQT01001605    SSX31146.1    GECU01036070    GECU01016545    JAS71636.1    JAS91161.1    GECZ01009044    JAS60725.1    AXCN02000111    KK107054    QOIP01000004    EZA61567.1    RLU23283.1    HACG01016435    CEK63300.1    GFDL01012850    JAV22195.1    HAEF01001052    SBR38434.1    HAEI01005016    SBR91399.1    CVRI01000006    CRK88253.1    GL434395    EFN74959.1    HAEH01003896    SBR72497.1    HADZ01009684    SBP73625.1    HAEA01010021    SBQ38501.1    GCES01072106    JAR14217.1    GCES01072105    JAR14218.1    HAED01019531    HAEE01004796    SBR24816.1    HADY01006633    HAEJ01013501    SBS53958.1    ADTU01006991    GL887707    EGI70277.1    HACG01016434    CEK63299.1    GEZM01060136    JAV71252.1    JW877652    AFP10169.1    JW877540    AFP10057.1    AYCK01007807    KQ982625    KYQ53480.1    HADW01016517    SBP17917.1    HAEB01004768    HAEC01009496    SBQ51295.1    NHOQ01001318    PWA25165.1    GCES01154029    JAQ32293.1    GBYX01433547    JAO47773.1    JARO02000796    KPP77375.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000076407    + More
UP000075882    UP000075885    UP000037510    UP000075920    UP000075881    UP000075903    UP000075840    UP000007062    UP000075902    UP000075901    UP000002320    UP000000673    UP000075883    UP000075884    UP000069272    UP000245119    UP000007266    UP000076408    UP000075886    UP000053097    UP000279307    UP000002358    UP000085678    UP000221080    UP000261600    UP000183832    UP000000311    UP000261640    UP000265020    UP000265000    UP000261520    UP000261420    UP000005205    UP000007755    UP000018467    UP000261360    UP000261400    UP000261340    UP000257200    UP000257160    UP000265080    UP000261560    UP000028760    UP000261500    UP000075809    UP000264800    UP000192220    UP000261660    UP000265040    UP000264820    UP000261480    UP000261540    UP000261380    UP000034805    UP000189706    UP000002852   

PRIDE

H9JYH8   

Pfam

PF08768   DUF1794        + More
PF03828   PAP_assoc

Interpro

IPR012674   Calycin        + More
IPR014878   DUF1794       
IPR002058   PAP_assoc       

SUPFAM

SSF50814   SSF50814       

Gene 3D

2.40.128.20    

CDD

cd07828  nitrobindin

ProteinModelPortal

H9JYH8   A0A2A4IYY6   A0A2W1BKL0   A0A2H1V841   A0A212EUM5   A0A194Q0S8   + More
A0A194R5H7   A0A2H1WBF8   A0A182XKH0   A0A182LCU8   A0A182PK58   A0A0L7KFK4   U5ESU6   A0A182VXN8   A0A182JZN5   A0A182V5Z3   A0A182HJH4   Q7Q0H8   A0A182U0V7   A0A1B6DRQ0   A0A1Q3F3N3   A0A182SS04   B0X2P7   W5JQP7   A0A182LW67   A0A2M4AWS4   A0A2M4C1X5   A0A2M4C1Z1   A0A182NL82   A0A182FAW2   S4P5L0   A0A2T7NAS2   D6WTT0   T1E906   A0A2M3ZD65   A0A182YIF5   A0A1B6L8V4   A0A336MLJ5   A0A1B6HAA9   A0A1B6GE48   A0A182Q6J4   A0A026WZW3   K7IR91   A0A1S3I2B4   A0A0B6Z6E5   A0A1Q3F3R2   A0A1S3I2B6   A0A2D0SVY2   A0A3Q3JY83   A0A1A8L3G8   A0A1A8QE21   A0A1J1HJQ0   E1ZV30   A0A3Q3M6M1   A0A3Q2CEG8   A0A1A8NUV0   A0A1A8C4J9   A0A1A8DZ19   A0A146VBB3   A0A146VAI4   A0A1A8JXT5   A0A3B4ALT2   A0A3Q2CEP0   A0A3B4U3R5   A0A1A8V3Y1   A0A158P257   F4W6E2   W5KF72   A0A0B6Z3U0   A0A3B4XCJ1   A0A3B4ZW66   A0A3Q0S927   A0A1Y1LC58   A0A3Q1GZL8   V9LCX4   V9LCE7   A0A3Q1B370   A0A3P8SE00   A0A3B3CV70   A0A087XVX4   A0A3B3W1R2   A0A151X022   A0A1A7XIM8   A0A3B1J996   A0A1A8EVX6   A0A315VS22   A0A3Q3FRX1   A0A146NKC9   A0A0S7I7N7   A0A2I4D3G1   A0A3Q3FXQ8   A0A3Q1I8N1   A0A3Q2YBM8   A0A3B3YJA1   A0A3B3RDT2   A0A3B5KSC4   A0A0P7V5H6   A0A1U8C387   M4ANG2  

PDB

3IA8     E-value=1.06559e-26,     Score=293

KEGG

101735771    K23205 THAP domain-containing protein 4 | (RefSeq) THAP domain-containing protein 4-like

GO

Length:

163

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00059

Exp number, first 60 AAs:

0.00059

Total prob of N-in:

0.10100

outside

1  -  163

 

 

Pi

245.10202

Theta

220.992435

Tajima's D

0.286135

CLR

0

CSRT

0.450427478626069

Interpretation

Uncertain