Silkworm Genome Informatics Database

Gene

KWMTBOMO14713

Annotation

PREDICTED:_nascent_polypeptide-associated_complex_subunit_alpha?_muscle-specific_form-like_[Bombyx_mori]

Location

Bomo_Chr24(-):13367707-13369566 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.077

CDS

ATGTCGGGGGGGAACCCACCTCCAACTATCAGCACACCCGGCCCGTCTCATAAGGGACGACAGGCAATGCCGGAAGTTCAATTACCAACACCAACACCTGCAATCCGTATGGCCCCGATGGGACCCGGTGCGGGCAGTTCGGCCGGGCCTTCGGCCGCGGCCAGGGGACCCCTGAGGATCGTACCGGTGGAAAGTAACTTTCCTACGTCGGCCGATCCCTCTGGGCCCTCTCGGCCGCGGAAGAAGGCCAGGTCAGAGTCTGACCGAGGCTCATCGGGCGACCAAGATAAACGCCCACGTATAGGCCCTTCCTCCAGGTCGGAGGGAGAAGAGAGCGTGACCACGTCCACGGATCACTCCTCTACCGAGTCTATTACTCCTTCCTCGTCAAGATCCACTTCCCCCTCTGGGAGTCCGATCCCAGTCCAACCCGTTCCTAAGCCTAGAGCACCCGCCAGGACAGGGATTGCTCCTAGGCAATTGAGAACCCCTCCTCACTCTCCTTCCCCAACCCTATCCCCAATCCCGGTGGACTCTACCCGAGGTGCCCCCGCCCTAAGCGGCACGGCGGGTAACCTGGACTCCACCAGGTATATGGACCTAGAGTCCACCAGACCGCATCACGCGCCTAAGACAAATCCTAAGCCCTCTACCTCCTATGCTGCTATGGCAGCTAGGCCGGGTATCCCATCCATCCAGAGGACATCCCAATCCTCTCATGTCCCTCCCCCGAGGCCGAAGGGTCGTGCCCAGGAGGAGCTGCGCCGACATCCGCCAATAATGGTGGAGGCCCTCCCTAATTGGTCCCGCCACATGGCGGCCATTAGGGAGCGCCTTGGCCGCGCCCCATCGGCGCGACCCTTCGGCGCCGGTTTTAGATTCCTGCCGACGTCGGTTGAGGAATACAGGGCGGTCCAGGCCTACCTGTCGGAGGCCTCTGCCAGGGATAGTACCATTAAATGGTACTGCTATGCCCTGACAGGGGAGATTCCGACCAAGGTGGCTGTCCGGGGCCTCCCTGCCGATACTGACGCGGCAGAAATAACCGATGCCCTGAAGGAGCTGGGGTTCCCGGCTCGTCACGCCAGGTGCATCAGGTCCCAGAGAGGGCGCCCGGGCTGCGTGTTTTACGTAGCCTTGGACCACCTCTCGAAGGACGACCTCGCCCGCCTGTACGCAGTCAATGAACTGCTGTACTTGCCGGGGGTGACAGTTGAGGGATGGCGACCAACCCGCGGGCCTGCGCAGTGTCATCGCTGCCAGGCCTTCGGGCACGCCTCGAACAATTGTCACCGAGCGGTCCGTTGTGTTCGATGTGCCGGGGAGCACGTCGTAGCGGACTGCCCGAGGCCGAGGGACGGCCCATTCTCCTGCGCCAATTGCGGGAAGGACCACGCCGCCGTTGATAGGCGGTGTCCGGTCTACCGCAAGAAGGCCAGGATGATGGGAGTAACCGTCCCTCCTCCTGCGCCAATGGTGCCTCGACCCGGGAACACAGCTCTTCCCTCTGTAGCTCCCATTCCAAAGGGGAAGGGGAAAGGGAAAGGGAAATCCTCCCAGCCCCAACCCCTCCCCTGTCCTCACCCATCCCCCCTGCCGTCTCAGTGGAGGCCAATCCATCAGCGGCAACGCTGA

Protein

MSGGNPPPTISTPGPSHKGRQAMPEVQLPTPTPAIRMAPMGPGAGSSAGPSAAARGPLRIVPVESNFPTSADPSGPSRPRKKARSESDRGSSGDQDKRPRIGPSSRSEGEESVTTSTDHSSTESITPSSSRSTSPSGSPIPVQPVPKPRAPARTGIAPRQLRTPPHSPSPTLSPIPVDSTRGAPALSGTAGNLDSTRYMDLESTRPHHAPKTNPKPSTSYAAMAARPGIPSIQRTSQSSHVPPPRPKGRAQEELRRHPPIMVEALPNWSRHMAAIRERLGRAPSARPFGAGFRFLPTSVEEYRAVQAYLSEASARDSTIKWYCYALTGEIPTKVAVRGLPADTDAAEITDALKELGFPARHARCIRSQRGRPGCVFYVALDHLSKDDLARLYAVNELLYLPGVTVEGWRPTRGPAQCHRCQAFGHASNNCHRAVRCVRCAGEHVVADCPRPRDGPFSCANCGKDHAAVDRRCPVYRKKARMMGVTVPPPAPMVPRPGNTALPSVAPIPKGKGKGKGKSSQPQPLPCPHPSPLPSQWRPIHQRQR

Uniprot

NA

ProteinModelPortal

NA

KEGG

105842529 no KO assigned | (RefSeq) nascent polypeptide-associated complex subunit alpha, muscle-specific form

GO

GO:0003676 GO:0008270 GO:0017038 GO:0006605 GO:0006886 GO:0005515 GO:0003824 GO:0008152 GO:0016491 GO:0015930

Length:

544

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00046

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00040

outside

1 - 544

Pi

358.595959

Theta

207.188676

Tajima's D

2.518829

CLR

2.486879

CSRT

0.948502574871256

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree