Gene

KWMTBOMO14697

Pre Gene Modal

BGIBMGA009621

Annotation

low_molecular_mass_30_kDa_lipoprotein_21G1-like_[Bombyx_mori]

Location

Bomo_Chr24(+):12918714-12920756      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.321

CDS

ATGCCAACTAGTTTCAGCCATTCCCAGGTAAAAACACCATCAGAGAAAGAATGGGAAGCCGCCTCTGAGCCAGACTACCACACAAATGAGGACCTGTTGTATCCGTACACCTCAATGCCCTACTTCGGTATGTACGACCTCGTGAAGATCCCGACCGACAGAGGGCTGGTACACCACGTCAATTACTGGGGAGAAGGAAAAGTGACTAACCTTGAAAAGGTAAGAGGCTTCTCTCGGAGCTACAATGTGAACGAACAGTTTGCGCTCGTCAGTAAGGGCCACAGCAAGGGAACGCAAATACCCAACAGGATTCCCGTCGTGTCCGTGGACGACAGCGACACTTCCAGTTACATCACAGACGGTGGTGTCAAAACTGTTACCATCAGTACGAAGCCCATCAGTAAGCGGTGCGCCGCAGACGTCGCCAGGATCGCCAACGCGTCCGAAGGACTCGTCGTTGCCTACGGATATTCTGACAATTCTGATGACATTCAAAATCTCGAGCGTGAGCTTGTTAAAAAGGGCTTGTACTATGGAGTCGGGTACGAACTGCCCGCAGACTTGAAGACCCAGACGGAATTCAGCACGAAGAGGGTCTTTGCCGACGCAACGTCAATCAACAATCACTTGTACAACTTGGTTACGGGCGGCGATTACATCAACGCGGTGAAGACTGTGAGCAGTCTCGTTAACAACCAGGGCTATGGCGTCTGTCGCGACGTCGTCTCGCGGCTCGTCTCGCAGGGCATCAAGAATGCCATGTCGTTCGCGTACAAGCTGTGGCACGAGGGCCACAAGGACATCGTCGTAGACTACTTCCCGAGCGAATTCCAACTCATACTCGACCAAAAGAGAATTAAACTCATCGGCAAACATTACAATCAAGCTCTCAAACTGGATGCCAATGTTGACTGGTACAACGACCGCCTAACCTGGGGAGACGGAAAGGACTACACCAGCTACCGAGTCAGCTGGCGACTCATCTCTCTTTGGGAAAACAACAACGTCATCTTCAAGATACAGAACACCGAACACAATATGTACTTGAAACTGGACGTGAACGTAGACAGCTACGGCGACAGGAAGACCTGGGGATCGAACGATTCTAGTGAGAAGAGACACACCTGGTTCTTATACCCGGTGAAGGTGGGCGACCAACAGCTATTCCTCATCGAGAATCGGGAGTACCGGCAGGGACTGAAGCTGGACGCGAGCGTGGACTGGTACGGGGACCGCCTTGTGTGGGGGAACAACGGGGTAGTCGCCACCAACCCTGAGTACTTCGGCTTCATAATCCAGCCGTGGCAGTGA

Protein

MPTSFSHSQVKTPSEKEWEAASEPDYHTNEDLLYPYTSMPYFGMYDLVKIPTDRGLVHHVNYWGEGKVTNLEKVRGFSRSYNVNEQFALVSKGHSKGTQIPNRIPVVSVDDSDTSSYITDGGVKTVTISTKPISKRCAADVARIANASEGLVVAYGYSDNSDDIQNLERELVKKGLYYGVGYELPADLKTQTEFSTKRVFADATSINNHLYNLVTGGDYINAVKTVSSLVNNQGYGVCRDVVSRLVSQGIKNAMSFAYKLWHEGHKDIVVDYFPSEFQLILDQKRIKLIGKHYNQALKLDANVDWYNDRLTWGDGKDYTSYRVSWRLISLWENNNVIFKIQNTEHNMYLKLDVNVDSYGDRKTWGSNDSSEKRHTWFLYPVKVGDQQLFLIENREYRQGLKLDASVDWYGDRLVWGNNGVVATNPEYFGFIIQPWQ

Uniprot

H9JJC0   Q2PQU4   H9B447   H9B445   H9B451   H9JJ72   + More
B5BSX5   H9JF68   H9JL03   A0A194QYV5   A0A2W1BPF5   Q76IB6   A0A194Q636   A0A385HW64   A0A2A4JTT3   A0A2A4IYY5   A0A2A4K904   A0A3G1LBE0   A0A2H1WST8   A0A2W1BZD4   A0A3G1LBD4   A0A2W1BV38   H9JMX4   H9B455   H9B460   A0A2T4HWM7   A0A1T3FC56  

Pubmed

19121390    26078299    17112968    18840462    26354079    28756777    + More
12871935    29175381   

EMBL

BABH01036437    JN977541    AFC87821.1    BABH01011413    DQ306881    JN977531    + More
ABC18268.1    AFC87811.1    BABH01026781    JN977532    AFC87812.1    BABH01028979    JN977530    AFC87810.1    JN977536    AFC87816.1    AB436163    BAG70410.1    BABH01026782    JN977537    AFC87817.1    KQ460930    KPJ10718.1    KZ149940    PZC76929.1    AB098260    BAC82630.1    KQ459582    KPI98870.1    MG799571    AXY55009.1    NWSH01000685    PCG74802.1    NWSH01005147    PCG64400.1    NWSH01000017    PCG80765.1    MF497270    AUB45122.1    ODYU01010790    SOQ56108.1    KZ149893    PZC78944.1    MF497269    AUB45121.1    PZC78918.1    BABH01028980    JN977540    AFC87820.1    JN977545    AFC87825.1    PJNJ01000010    PTD20097.1    MAIC01000014    OPB75435.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000241377    UP000190816    + More

PRIDE

H9JJC0    Q2PQU4    H9B447    H9B445    H9B451    H9JJ72    + More
B5BSX5    H9JF68    H9JL03    H9JMX4    H9B455    H9B460   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9JJC0   Q2PQU4   H9B447   H9B445   H9B451   H9JJ72   + More
B5BSX5   H9JF68   H9JL03   A0A194QYV5   A0A2W1BPF5   Q76IB6   A0A194Q636   A0A385HW64   A0A2A4JTT3   A0A2A4IYY5   A0A2A4K904   A0A3G1LBE0   A0A2H1WST8   A0A2W1BZD4   A0A3G1LBD4   A0A2W1BV38   H9JMX4   H9B455   H9B460   A0A2T4HWM7   A0A1T3FC56  

PDB

3PUB     E-value=1.97569e-43,     Score=443

KEGG

101746760    no KO assigned | (RefSeq) low molecular mass 30 kDa lipoprotein 21G1-like

GO

GO:0005576   GO:0008270   GO:0042803   GO:0051087   GO:0005634   GO:0006303   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

436

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00336

Exp number, first 60 AAs:

0.00038

Total prob of N-in:

0.00259

outside

1  -  436

 

 

Pi

126.210196

Theta

160.790735

Tajima's D

0.788603

CLR

0.111258

CSRT

0.600069996500175

Interpretation

Possibly Positive selection