Gene

KWMTBOMO14696  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009573

Annotation

30K_protein_18_[Bombyx_mori]

Location

Bomo_Chr24(-):12915971-12917483      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.406

CDS

ATGGATCCACACGACCACTGGAAATCTGCCAAGCGCCCCAACTACGTGACCAACGTGGACCTGAAGTATCCGTACTCAGAGCTGCCGTACACAGCGCAGTATAAGCTGCTCAAGCTCCCCATCACTGGAGAGCTGATCGAACATGTCGACTACTGGGGCGAGGGGAGTATCGTCAACGGGGGATTGTATTCGGGCTTCCGCGACTGCTACAATGTGAACCGACAGTACCAAGTGGTCAGCAACGGGTCCGACAAGGGTCACAAGATCCCCAACAGGATCCCGGTGCGCGACGAGAACGACTGCGACACCCGGGCTTACATCAAGGATGACTCGGTCAAAATAGTGACGCTCATGAGTGCGCCCATCATTCCGAACAGCGCCAGAGATATTACGAGAATCGTAAACGAACGCGTCGGCATGGTCGTCATCTACGGCATGCCGGTAGAGTCCCAGGGTATTAAACTCTTGGCTGCCGAGCTAAAGAACAAGCTTCTGCTGTACTGTCCCGACTACGAGCTGTCCGATTACTTACAGGAACCTACAATGATGGACTCGCACGTGGCTTTCCTCAACAAGCAACTTCTTGTGGATCTGCTGGTCAAGTACGTGTCGACCGGGGACTACGACAAGGCAGTGACTACCACGAAGTTCTTGAAAGATGATAACGTCGGTTTTGTTATCGAGGAGCTGATCGACAGACTCTTGCACGCACGAGAATCTAACATGTTCGCATACGCGGACAAGTTGTGGTCCGCCGGACACCACGATATAGTCAATGACTTTTTCCCTTCAGAAGTCAAATTGATCACCAAGCAAGAAAGGGTGAAAATCATCGGAAGACATTACAATCAAGCTCTGAAGCTGGACTCCCATCTCGACTGGTACAACGACCGCCTGGCCTGGGGAGACAGCAAGGACAAGACTAGTCACAGAATGAGCTGGAAGCTTATTCCGGTATGGGAGAATAACAAGCTGCTGTATAAAATAATGAACACTGAACATACTATGTACCTGAAGCTGGACAAGAGCGTAGACGGGTACGGAGACAGGAAAGCGTGGGGCTCCAACAACTCGGAAGAGAAGCGCCACCTGTGGAAGCTGACGCCGGTAGTGCTGGAGACCGGCAACGTCTTACTCATAGAGAACCACGAGTACGGGCAGGGTCTGAAGCTGGACGCGAGCGTGGACTGGTACGGCGACCGCCTGCTCTGGGGAAACAACGGAAACGTCAATGGTAACCCTAGCTACTTCGGCTGGGTCATCGACGCGTGGCAGTAG

Protein

MDPHDHWKSAKRPNYVTNVDLKYPYSELPYTAQYKLLKLPITGELIEHVDYWGEGSIVNGGLYSGFRDCYNVNRQYQVVSNGSDKGHKIPNRIPVRDENDCDTRAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGMPVESQGIKLLAAELKNKLLLYCPDYELSDYLQEPTMMDSHVAFLNKQLLVDLLVKYVSTGDYDKAVTTTKFLKDDNVGFVIEELIDRLLHARESNMFAYADKLWSAGHHDIVNDFFPSEVKLITKQERVKIIGRHYNQALKLDSHLDWYNDRLAWGDSKDKTSHRMSWKLIPVWENNKLLYKIMNTEHTMYLKLDKSVDGYGDRKAWGSNNSEEKRHLWKLTPVVLETGNVLLIENHEYGQGLKLDASVDWYGDRLLWGNNGNVNGNPSYFGWVIDAWQ

Uniprot

H9JJ72   H9B451   B5BSX5   H9JF68   H9JL03   H9B455   + More
H9JMX4   H9B460   Q2PQU4   H9B445   H9JJC0   H9B447   A0A2W1BPF5   A0A194QYV5   A0A2W1BV38   A0A3G1LBD4   Q76IB6   A0A2A4IYY5   A0A2A4K904   A0A2A4JTT3   A0A194Q636   A0A2W1BZD4   A0A3G1LBE0   A0A385HW64   A0A2H1WST8   A0A2T4HWM7   A0A1T3FC56  

Pubmed

19121390    26078299    18840462    17112968    28756777    26354079    + More
29175381    12871935   

EMBL

BABH01036437    JN977536    AFC87816.1    AB436163    BAG70410.1    BABH01026782    + More
JN977537    AFC87817.1    BABH01011413    JN977540    AFC87820.1    BABH01028980    JN977545    AFC87825.1    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01028979    JN977530    AFC87810.1    JN977541    AFC87821.1    BABH01026781    JN977532    AFC87812.1    KZ149940    PZC76929.1    KQ460930    KPJ10718.1    KZ149893    PZC78918.1    MF497269    AUB45121.1    AB098260    BAC82630.1    NWSH01005147    PCG64400.1    NWSH01000017    PCG80765.1    NWSH01000685    PCG74802.1    KQ459582    KPI98870.1    PZC78944.1    MF497270    AUB45122.1    MG799571    AXY55009.1    ODYU01010790    SOQ56108.1    PJNJ01000010    PTD20097.1    MAIC01000014    OPB75435.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000241377    UP000190816    + More

PRIDE

H9JJ72    H9B451    B5BSX5    H9JF68    H9JL03    H9B455    + More
H9JMX4    H9B460    Q2PQU4    H9B445    H9JJC0    H9B447   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR042046   Lipoprotein_11_N        + More
IPR004943   Lipoprotein_11       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9JJ72   H9B451   B5BSX5   H9JF68   H9JL03   H9B455   + More
H9JMX4   H9B460   Q2PQU4   H9B445   H9JJC0   H9B447   A0A2W1BPF5   A0A194QYV5   A0A2W1BV38   A0A3G1LBD4   Q76IB6   A0A2A4IYY5   A0A2A4K904   A0A2A4JTT3   A0A194Q636   A0A2W1BZD4   A0A3G1LBE0   A0A385HW64   A0A2H1WST8   A0A2T4HWM7   A0A1T3FC56  

PDB

3PUB     E-value=1.41684e-35,     Score=375

KEGG

101746622    no KO assigned | (RefSeq) microvitellogenin-like

GO

GO:0005576   GO:0008270   GO:0042803   GO:0051087   GO:0005634   GO:0006303   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

425

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01815

Exp number, first 60 AAs:

0.0007

Total prob of N-in:

0.00894

outside

1  -  425

 

 

Pi

303.21719

Theta

209.4783

Tajima's D

1.433412

CLR

0

CSRT

0.770861456927154

Interpretation

Possibly Positive selection