Silkworm Genome Informatics Database

Gene

KWMTBOMO14692

Pre Gene Modal

BGIBMGA009575

Annotation

PREDICTED:_PH-interacting_protein_[Papilio_machaon]

Location

Bomo_Chr24(-):12870732-12891543 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.729

CDS

ATGGAGGAATCCAACGAAGAGTATAACGTAATTCCAGAACTCTACTTTCTGATAGCGAAATTTCTGTCTGGTGGTCCACTTAAGGAAACTGCAAAGACACTGCTGAAAGAGCTCGAGACGATCGAGGTGCTGCCGCGGCGACTGGACTGGCTGGGAACCGAACACACACAGTCCTATGAGGAACTTGCAAGCCAGCACTCCGACGTGCAGTGGCGGCGGCTGGCGGCCGTGTGCGAGCGCGCGCTGCGGCTGGCCGGGCGGGGCGCGGCAGACGGGCGCCCGCCCCGCGACTCCGTGCGCGCCCGTCTGTCGCTGCTCGGAGAGGCGCTGGTGCGACCCCGACCGCAGCTGCCCTGCTCCGCACAGGATCATTCGCTCGTCCGGCGGCTGATGTACCGGGAGCTGGGGTGCGGGGCGCGCGCGGGTGTGGCGGGGGACGCGAGCGGCAAGGAGGCCGTGTTCCCGCGCCGGCTGCTGTCCGGCCTGCAGCTGCAGCGCCGCACGCTGGGCCACCTCTCCGCGGTCTACTGCCTGGTCTTCGACTGCACCGGACGTTACGTCATCACGGGCGCGGACGACCTGCTAGTGAAGGTGTGGAGCGCGCGGGACGGGCGGCTGGTGGGCACGCTGCGCGGGTGCGGCGCGGAGATCACGGACGTGTGCGTGTCGCGGGACGGCGCGCTGGTGGCGTGCGGCTCGGTGGAGCGCCTGGTGCGGGTCTGGTGCCTGGCCTCGGCCGCGCCGCGCGCCGTGCTGCACGCGCACCAGGGGACCATCACCTCCGTGCACTGGTCGCCGTGCTTCCGCGGCGGCGTGCGGTGGCTGGCCTCCACGTCCACGGACGGCTCGGTGGCCTTCTGGACGTGCTCGGGGGAGGGGCAGTTCCTCTCGCGGCCCGTGCACTTCGTGGAGCGCACGCGGCCCGGGGCCTGCCACATGATCTGCGGGGCCTGGTCCCCCGGCGGAGCCCTGCTCGCCGCCGGCAGTGCGGACCACCACGTCAGGCTGTACGCGCTGGAGCCCTCGCCTAGGAGGATACTAGAGGTGGCGGTGCACAGCGACGCCGTGGACAGCATCGCGTGGGCGCACCGAGGTCTGAGGTTCGTCTCCGGTAGTAAGGACGGCACGGCGGCCGTGTGGAGCCTGCACGCGACGCAGTGGCGCCACGCCATGCTGGTGCCCGCGGACCACGCCGGGGACGGGGCCGCCGCCGCCGGGGACGCCAAGAAACTCAAGGTGACCATGGTCTGCTGGGACCGCAGCGACCGGTTCGTGGTCACGGCCGTGTCGGACCACACGCTGCGCGTCTGGTGCGAGCGCGGCCGGATGCTGCGGGTGCTGCGCGGACACAAGGACGAGGCCTACGTGCTAGAGCCGCACCCGCGCCTGCCCGCCGTGCTGCTGTCCGCGGGCCACGACGGCCAGCTGTTCGTGTGGGACGTCGAGAACGGAGAGGTGCTGTGCAACTTCCAGAACACCATAGCGGGGCAGGGCGAGGGCGCGGTGTTCGACGCGAAGTGGGGCGGGGACTGCTCCGTGGCGGCGTCCGACTCGCACGGACACGTGCTGCTGCTGGGGCTGGGCCAGGGACACCCGCTGCTGCACGAGCTGCCGCACGAGCTGTTCTTCCACACGGACTACAGGCCGCTCACCAGGGACGCGCTCGGCGGCGCACTGGACGAACAAACTGAGACCCCCCCTCACCTGATGCCACCTCCGTTCCTGGTGGACGTGGAAGGGGCTCCGCACCCCGCGCGCTTCCAACGCTTGGTTCCGGGCCGCGAGCTGTTGGCGCCCGAGCTGCTCTCCCCCGCCGGGGCCTCGCCCCCCGGTGGGGCGGCACCCGCCCCTCCCGGGGTGTGGAGGGGAGAAGGCGTAAGGCACGCGGGGGGATCGTGGCTAGCGGACGCCTTACAACTACCCCCCTCTTGTAGACCCATAGTCCCTCCCCTGCCTAGCTCCGTCAGGCAACAGATTGAAGAGACTAGCTGCGAGGTCCAGGAGTGGGAGCTGAGTTGGTATCGACGCGAGATGAGGCGGCGCCCCGTGATGATCTCGACGAGCGCGGAGGGGAGCGCCCGGGGACCGCCGCGGCCCCGCAAGCGAGCCCCCCTGGTGCACGCCCCGCGCCCCGCCGCCCAGGTGTGGAGTGCGTCGGAGGCGGAGAGCGCGTCCGGCTCCGACTCGTCGGATCCCTCCGTTCGGCTGTCCGCCTCGTCCGCGCCGCCTTCGGACTCCTCCAGTTCGGAGTCGTCCCAGTACTCGGACTGGGAGACCGGCGCCGCCCTCGCGCCCCCCGCGCGCGCCCGGCGGCGGCCCCTCCCCGCCGGCAGGTACCGGGGCGGACCGTCGCGCAGCAAGCGGCCGCCGCCCCCCCGCAGCGAGGAGGGCGAGCCCCGGGACCGCAGCCCGGGCACCTCCGCGGTGGGCCGTCTGGAGCTGCCCGAGGAGTACCGCCCCGGCGAGTGGCTGACGGCCGTGTCTCCGCGGAAGGCTCCATACCATCCTCAGATGGGGGACCAGTGTTTATACTTCAAGCTGGGTCATCAGAAATACTTCGAGGCCGTGTCCGAGAAGGACGTGTACAAAGTGAATCCCCGGGACAAGCCGTGGGAGAGGACGCAGATATACGACTGCGAGCTGGTGAAGGTGGTGGGCGTGAAGTACGTGATCAAGCCGCCGCGGCTGGTGTGTCTGCGGCTGTCGTGTCTGGAGGGCGCGCGGCCCCGCTCCTTCACCGTCAAGTACCACGACATGGCTGACGTCATCGACTTCCTCGTCCTGCGCCAGCAATTCGACGCGGCGGCCGCCAGGAGGTGGAACGCGGGGGACAGGTTCAGGTGTATGATAGATGACTCGTGGTGGACAGGCGTGGTGCTGGAGGGCGGAGTACCCGCGCCGGGCGACCTCGCCACTGAGGGGGCGCAGGCCTGGGGTGCCGCGGCCGCCGCTCACTTCTTGGCGCTGCGGGTACGCTGGGACAACGGAGAGGTCGAGAGACTGTCGCCCTGGGACCTCGAGCCGGTTGACCCGCACAGACTACCGTCGGAGCCGGGCGGCGCGGTCAGCGTGCTACCGCACGAGCTGGAAGCCGTCCTCTACCGCGCCGCACCCCACGAGTGGCCGCACGCCGACCGCACGATCGCGTGCCGTGCCATTGCACGCCACGTGGAACAGGTGATGCAGCTGTCGGCCGCGGAACCGTTCGTGGCGCCGGTGGACCTACAGCAGTACCCGACGTACGCGCGCGTCGTGCCTTACCCCATCGACCTGGCCACCATCCGCGCCAGGTTCGAGAATCTGTTCTACCGGCGCGCGGCGGCGGCGCAGTTCGACGTGCGCTACCTGGCCAGCAACGCCGAGCGGTTCAACGACCGCCACTCCGCCATCGTGCGCCAGGCGCGCCTGCTCACTGACCTGCTGCTGCACGTCATCGAGAACTGGCGCGAGGTGCACGTGCTGGACAAGTACCACGAGCTGGCGGCCAGCTACCACTCCTCCGACGACGAGCCGCTCGCCGTCGCCAAGGCGGGCGGCTGGCGGCGGTGCTGCGCGCGCGTGCTGCGGGAGCTGCTGGTGTCCCCGGACGCGGAGCCCTTCACGCGGCCCGTCTCCCTGCAGCAGGCGCCTGACTACCACGCCGTGGTGTCGGAGCCGATGGACCTGGGCACGGTGCAGCGCGGCCTGGAGGCGGGGGACTACTCCTCGGCGGAGCAGTTCCTGAGCGACGTGCGGCTGGTGTTCGCAAACAGCAGGCTCTACAACACCAATAAGCGGAGCCGGATATACTCCATGACGGTCCGACTGTCGGCGCTGTTCGAGGCGCTGTGGGTCCGGCTGGGCCCACGCGCCCCACGCACCCCACGCCGCGCCCCACGCACGCGCCGGCCCCCCCGCGCCCCCCGCACCAGGAACGAACACGGAGAGCGGCGCGGCGAGGGCGCGGCCTCTGACTCCAGCTCCGAGCGTGACTCCTGGGACAGCGACGCGCCACTGCACAAACACCGCAAGGGCAAGGGCATCGGCAAGAAGAGCAAGCCCCCTCCCCCCGCCGCGGAGCCCCTTCCGGGGACCAGCAGCAGGCTCACGGACGACGAGGCGTACGTCCCCGAGCAGAACGGAGTCGCGAGCGGCTCGGACTCGGAGAGCGTGTACTCCAACATCGAGGTCGTGGAGGAGGAACTGGTCGAGGAGGACGTGCACCTCACCTACGACGAGGGCAGCGACCACCTCACCAGGGCCGACGGGAGTGGCAGCAGGGGTAGCAGGAAACGTCGCAGGATCAGTTCGGACAGCGACCGCAGTTCGCGGCGCAGGAAGAGGAAGGAACAGCACGGCAAGCGGGTCCGGGAGCGGGTTGTCGCGGCGTCCAGCTCGTCGTCCTCGTGGGGGTCGGCGGAGGGGGAGGAGGGGGGCGCCGAGGGGGGACACTACGAGTCGGACCGCTCGTACCGGCCGCGGTTCGAGTCCGACGACGACGCGCCGCTGCACCTCTACCGGCGGCGCGCGGGCGGCGCGGGCGGGGAGCAGCCCGGCACGTCGCGAGCGCAGAATGGACACGCGAGGGCCTCGGGCTCTGGCGTGTCGCTGCGGTCGCGCCGGTCCCCGCGCCGCTACAACGAGGACAGCGAGGACGACTCCGCCGCCGTCATCAGCAAGCGCTCCCAGCACCACCACCGCGCCAGGACGCAGAGCGCGGCGCCGCACGCCACGGACCACGACTACTACAACGGACACGCGTCCGACCACAGCGGGCTCGCGGTTGGCGCAGTGTCCGTGTCGTCCCGGGGCAGGGTCCGCAAGCTGACGGCCAAGGCGCGCGGATTGCTCCGGGAATAG

Protein

MEESNEEYNVIPELYFLIAKFLSGGPLKETAKTLLKELETIEVLPRRLDWLGTEHTQSYEELASQHSDVQWRRLAAVCERALRLAGRGAADGRPPRDSVRARLSLLGEALVRPRPQLPCSAQDHSLVRRLMYRELGCGARAGVAGDASGKEAVFPRRLLSGLQLQRRTLGHLSAVYCLVFDCTGRYVITGADDLLVKVWSARDGRLVGTLRGCGAEITDVCVSRDGALVACGSVERLVRVWCLASAAPRAVLHAHQGTITSVHWSPCFRGGVRWLASTSTDGSVAFWTCSGEGQFLSRPVHFVERTRPGACHMICGAWSPGGALLAAGSADHHVRLYALEPSPRRILEVAVHSDAVDSIAWAHRGLRFVSGSKDGTAAVWSLHATQWRHAMLVPADHAGDGAAAAGDAKKLKVTMVCWDRSDRFVVTAVSDHTLRVWCERGRMLRVLRGHKDEAYVLEPHPRLPAVLLSAGHDGQLFVWDVENGEVLCNFQNTIAGQGEGAVFDAKWGGDCSVAASDSHGHVLLLGLGQGHPLLHELPHELFFHTDYRPLTRDALGGALDEQTETPPHLMPPPFLVDVEGAPHPARFQRLVPGRELLAPELLSPAGASPPGGAAPAPPGVWRGEGVRHAGGSWLADALQLPPSCRPIVPPLPSSVRQQIEETSCEVQEWELSWYRREMRRRPVMISTSAEGSARGPPRPRKRAPLVHAPRPAAQVWSASEAESASGSDSSDPSVRLSASSAPPSDSSSSESSQYSDWETGAALAPPARARRRPLPAGRYRGGPSRSKRPPPPRSEEGEPRDRSPGTSAVGRLELPEEYRPGEWLTAVSPRKAPYHPQMGDQCLYFKLGHQKYFEAVSEKDVYKVNPRDKPWERTQIYDCELVKVVGVKYVIKPPRLVCLRLSCLEGARPRSFTVKYHDMADVIDFLVLRQQFDAAAARRWNAGDRFRCMIDDSWWTGVVLEGGVPAPGDLATEGAQAWGAAAAAHFLALRVRWDNGEVERLSPWDLEPVDPHRLPSEPGGAVSVLPHELEAVLYRAAPHEWPHADRTIACRAIARHVEQVMQLSAAEPFVAPVDLQQYPTYARVVPYPIDLATIRARFENLFYRRAAAAQFDVRYLASNAERFNDRHSAIVRQARLLTDLLLHVIENWREVHVLDKYHELAASYHSSDDEPLAVAKAGGWRRCCARVLRELLVSPDAEPFTRPVSLQQAPDYHAVVSEPMDLGTVQRGLEAGDYSSAEQFLSDVRLVFANSRLYNTNKRSRIYSMTVRLSALFEALWVRLGPRAPRTPRRAPRTRRPPRAPRTRNEHGERRGEGAASDSSSERDSWDSDAPLHKHRKGKGIGKKSKPPPPAAEPLPGTSSRLTDDEAYVPEQNGVASGSDSESVYSNIEVVEEELVEEDVHLTYDEGSDHLTRADGSGSRGSRKRRRISSDSDRSSRRRKRKEQHGKRVRERVVAASSSSSSWGSAEGEEGGAEGGHYESDRSYRPRFESDDDAPLHLYRRRAGGAGGEQPGTSRAQNGHARASGSGVSLRSRRSPRRYNEDSEDDSAAVISKRSQHHHRARTQSAAPHATDHDYYNGHASDHSGLAVGAVSVSSRGRVRKLTAKARGLLRE

Uniprot

NA

ProteinModelPortal

NA

PDB

3Q2E E-value=9.83513e-24, Score=278

KEGG

101746756 K12231 E3 ubiquitin-protein ligase HECTD1 [EC:2.3.2.26] | (RefSeq) E3 ubiquitin-protein ligase HECTD

GO

GO:0005515 GO:0003676 GO:0042803 GO:0051087 GO:0005634 GO:0006303 GO:0003824 GO:0008152 GO:0016491 GO:0015930

Length:

1612

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07871

Exp number, first 60 AAs:

0.03442

Total prob of N-in:

0.00364

outside

1 - 1612

Pi

285.50448

Theta

187.829694

Tajima's D

1.355282

CLR

0.088413

CSRT

0.75681215939203

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics