Silkworm Genome Informatics Database

Gene

KWMTBOMO14690

Annotation

PREDICTED:_selenoprotein_S_A-like_[Amyelois_transitella]

Location

Bomo_Chr24(-):12862155-12864283 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.058

CDS

ATGATCAAATCTCCTCTGGAGTATCCGGACCGGGAACTGTCCCGCATGGAAGCAATCCAACGAGCTAGAGAAAAACAACAGCAGCTATTAGAGCAAGCATCGCAGCGAGCACTTGAAGCTCAAAAAGAGCGTGAAGAACGCAAGAGAGCAGAGAGGGCAGAAGCACTGGAGAAGTATGGGGCAGCAGTCACCGGCAGGAAGCTTGGTGGCTCCGATGATGGCTACCTTCCTCTCAGTGGAGGAGCTTCAGCCTCCACCTATCGACCCCCGAAGAAATCGAAATGTTCCGGAGGAGGATGCGGGAAATAA

Protein

MIKSPLEYPDRELSRMEAIQRAREKQQQLLEQASQRALEAQKEREERKRAERAEALEKYGAAVTGRKLGGSDDGYLPLSGGASASTYRPPKKSKCSGGGCGK

Uniprot

H9JJ75 A0A1E1WJT4 A0A2H1VGU8 A0A2W1B7E1 A0A2A4JD79 A0A194QTW0 + More
A0A194Q9X3 I4DNY3 S4PGK6

Pubmed

19121390 28756777 26354079 22651552 23622113

EMBL

BABH01036428 GDQN01003933 JAT87121.1 ODYU01002304 SOQ39622.1 KZ150253 + More
PZC71802.1 NWSH01002035 PCG69353.1 KQ461108 KPJ08968.1 KQ459249 KPJ02219.1 AK403195 BAM19623.1 GAIX01006175 JAA86385.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268

PRIDE

H9JJ75

Pfam

PF06936 Selenoprotein_S

Interpro

IPR009703 Selenoprotein_S

ProteinModelPortal

H9JJ75 A0A1E1WJT4 A0A2H1VGU8 A0A2W1B7E1 A0A2A4JD79 A0A194QTW0 + More
A0A194Q9X3 I4DNY3 S4PGK6

KEGG

101746338 K14025 selenoprotein S | (RefSeq) uncharacterized LOC101746338

GO

GO:0006886 GO:0030176

PANTHER

PTHR28621

Length:

102

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00014

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10270

outside

1 - 102

Pi

201.214099

Theta

145.053484

Tajima's D

1.215155

CLR

0

CSRT

0.716264186790661

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics