SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14688
Pre Gene Modal
BGIBMGA009619
Annotation
PREDICTED:_suppressor_of_cytokine_signaling_7-like_isoform_X2_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 3.032
 

Sequence

CDS
ATGGGACAGCAGACGTCCAGGAAAAGTGGAGAATGCACCTGTGGTTGTGGAGCCTGGGAAAGAAGACGCTATGCTGAATCACCCTCCAGTGTCCAGAGATATGTGAGCGCTGTAACAGACAGGTGGAGTGCAAGGGAGTGCGCTTGCAGAAGGAAAAGATGGCGACGACCTGCCTGCGTCTGCACTGCTTACAGAAGGGTTGGTGATGACAGATTGGCAGCAGTTCTGACGTTAGGAGCAAGAGATCTCAGAAGGGAATTAGATGCCATAGTCATTAACACTGAGAGCGACGCGGCGCGGGACGGAGACGCGACGGCTGAACTCTACGTGCTCTCCGTGGCGCCCAGGACGCCGGACACGGAAGGAAGCCCAGCATTGGAAGGGAGGAGGAATGAAACAACACAAACAAACGAAAGTGCAATACGACTACATCCACACTTCCAGGTTGTATGCGGTAGTGAACTAAGAGCGCTATTGCTTAGGGCTCCGCCCCTGCAGCAGCCGCAGCCCCCGCCTACTAAAGTACACACTCAGGTGGACTACATCCATTGCCTGGTGCCTGACCTCCAGGAGATAACGGCCTGCTCGTACTACTGGGGCAAGATGGACCGATACGAGGCCGAGAGATTGTTAGAGAATAAACCAGAGGGCACGTTCCTGCTGCGTGACTCCGCGCAGGAGGAGCACCTGTTCTCGGTGTCGTTCCGCAAGTACGGGCGCTCGCTGCACGCGCGCATTGAGCACTACCGACACCGGTTCAGCTTCGACTCGCACGACCCGGCCGTGTTCGCGGCGCGCACCGTCACCGGACTCATCGAGCACTACAAGGACCCCGCCTGCGTCATGTTCTTCGAGCCCATGCTCACCACGCCGCTGCCCCGCGCCGCGCCCTTCCCGCTCCAGCAGCTGGCGCGCGCCGTGCTCGTCTCGCACACCACCTACGACGGCGTGGAGCTGCTGCCCCTGCCGAGCCGCCTCCGCCGCTACCTCAAGGAGTACCACTACCGGCAGCGCGTGCGCGTGCGCCGCCTCGAGCCCGGCCTCTACCAGCCGCAGTAA
Protein
MGQQTSRKSGECTCGCGAWERRRYAESPSSVQRYVSAVTDRWSARECACRRKRWRRPACVCTAYRRVGDDRLAAVLTLGARDLRRELDAIVINTESDAARDGDATAELYVLSVAPRTPDTEGSPALEGRRNETTQTNESAIRLHPHFQVVCGSELRALLLRAPPLQQPQPPPTKVHTQVDYIHCLVPDLQEITACSYYWGKMDRYEAERLLENKPEGTFLLRDSAQEEHLFSVSFRKYGRSLHARIEHYRHRFSFDSHDPAVFAARTVTGLIEHYKDPACVMFFEPMLTTPLPRAAPFPLQQLARAVLVSHTTYDGVELLPLPSRLRRYLKEYHYRQRVRVRRLEPGLYQPQ

Summary

Pfam
PF00017   SH2        + More
PF07525   SOCS_box
Interpro
IPR001496   SOCS_box        + More
IPR036860   SH2_dom_sf       
IPR000980   SH2       
IPR036036   SOCS_box-like_dom_sf       
SUPFAM
SSF158235   SSF158235        + More
SSF55550   SSF55550       
Gene 3D
PDB
2IZV     E-value=1.1926e-53,     Score=530

Ontologies

Topology

Length:
352
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00244
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03933
outside
1  -  352
 
 

Population Genetic Test Statistics

Pi
340.611339
Theta
199.205749
Tajima's D
2.279726
CLR
0.122989
CSRT
0.920953952302385
Interpretation
Uncertain
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