Gene

KWMTBOMO14685

Pre Gene Modal

BGIBMGA009579

Annotation

PREDICTED:_pyridoxal_phosphate_phosphatase_PHOSPHO2-like_[Papilio_xuthus]

Location

Bomo_Chr24(-):12677878-12684916      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.482

CDS

ATGGCTTCTGTTGCTTTCTTTGATTTTGATCGTACAATAGTTGATGATGATTCTGATGCCACGATAATTAATAAATTAAGAGAGAAAAAGCCCCCGCCTGACTGGGAGAGCAGTAACCACGACTGGACTCCGTACATGAGTGATGTATTTGAGCACGCATACTCAGCCGGTCTAAGCGAAGAGGACATCCTGTCGTGCATAGCGTCAATGAAACCGAACCTCGGGGTGCAGCAGTTGATCAGGACGCTGTCCCAACAGGGCTGGGAGATTGTGGTCATCACAGACGCGAATAGTGTCTTCGTCAATCATTGGCTGACGGAGCACGGGTTGTTGCAATATATAACGAATGTCATCACAAATCGTGCGTTCTGGAGGCACAGCCGTCTGTACATCGAGCCCTATATGAAGCAGACGTCCTGCCCCAGGTGCCCTAAGAACCTCTGCAAGAGCGAGGCCCTGAGACGCTGGTGCTCGGAGATGCCGGCCAGGCGTATCGTGTATGTAGGGGACGGGAGAAACGATTACTGCCCCGCCACGTCGCTGCCCCCACACGCGACAGTGTTCCCCCGCCGCGGCTATCCACTGGACGACCTGGTGAAGAAGACGCTCTCGTCTCCCAACCCTCAAGTGAAGGCCAAAGTGATACCCTGGGACAACTGCTACAGGATACTCCAGGAACTCTACCCGGACATCATGGTGGATAATTAG

Protein

MASVAFFDFDRTIVDDDSDATIINKLREKKPPPDWESSNHDWTPYMSDVFEHAYSAGLSEEDILSCIASMKPNLGVQQLIRTLSQQGWEIVVITDANSVFVNHWLTEHGLLQYITNVITNRAFWRHSRLYIEPYMKQTSCPRCPKNLCKSEALRRWCSEMPARRIVYVGDGRNDYCPATSLPPHATVFPRRGYPLDDLVKKTLSSPNPQVKAKVIPWDNCYRILQELYPDIMVDN

Cofactor

Mg(2+)

Uniprot

H9JJ78   A0A194QFI6   A0A0L7KSZ1   A0A2A4JRX0   A0A212FBW3   A0A2H1VML4   + More
A0A2W1BHF5   A0A2P2I3B9   A0A2H8TVU7   E9G2T8   A0A0P5UF79   A0A162P635   A0A0P6ITD6   J3JYP1   A0A0P4XE87   N6UE28   A0A0P4VNS8   A0A3Q3KR18   A0A2U9CRV8   A0A3P9QFU7   A0A3B5BG61   U4UFM8   A0A2A3EB76   A0A3Q3EJ82   A0A3Q3NB98   A0A088A276   A0A2S2PJ61   A0A3B5LCF9   A0A3Q1G1Q8   A0A3B3ZXX6   A0A087YQK8   A0A3Q3MLW1   A0A3Q0RHK5   A0A2I4CDN7   I3KXX3   A0A3Q2Y961   A0A3B3Z081   C4WW78   J9K4I9   G3P3B8   A0A3Q1D061   A0A3Q3QV54   A0A0A9WZ77   A0A0S7HAZ4   A0A3Q1H0T8   A0A154NW46   A0A3P8WNL4   H2UYE6   A0A3B3U7I2   A0A3Q1JML6   A0A2J7PJC8   A0A0K8TH61   A0A0A9X9L4   A0A0P4W1U5   A0A3B4WI69   A0A0A9X299   A0A3Q2CX20   A0A3B4VPF3   M4AZ91   A0A154MKD9   R7VHD7   A0A3P8RY01   H2LD81   A0A3B3VGX4   A0A3B3WMG5   A0A1A8UDE6   A0A087YPW4   A0A3B4G3R5   A0A3Q2W6W7   A0A3P8NB51   A0A3P9D830   A0A3Q3XKJ5   A0A3P8VAU9   A0A1A7YG39   A0A1A8IXG1   A0A1A8A511   A0A1A8BT90   A0A1A8Q469   I3KYN6   M4AZL9   A0A0S7H697   A0A3P9NS49   A0A3B5MHQ9   C1BR97   A0A1A8N758   A0A1A7WGE7   A0A3P9KKB1   A0A1A8LGF0   A0A3P9H204   A0A195B0A7   A0A158NKU6   A0A146W466   A0A3Q2QMZ8   A0A3B4VG10   A0A1B6M9F2   A0A3Q4HYB8   A0A0C9RDB3  

Pubmed

19121390    26354079    26227816    22118469    28756777    21292972    + More
22516182    23537049    27129103    25463417    25186727    25401762    24487278    21551351    23542700    23254933    17554307    21347285   

EMBL

BABH01036416    BABH01036417    KQ459249    KPJ02231.1    JTDY01006265    KOB66161.1    + More
NWSH01000762    PCG74364.1    AGBW02009261    OWR51236.1    ODYU01003372    SOQ42047.1    KZ150125    PZC73124.1    IACF01002726    LAB68370.1    GFXV01005867    MBW17672.1    GL732530    EFX86450.1    GDIP01113861    JAL89853.1    LRGB01000512    KZS18554.1    GDIQ01000384    JAN94353.1    BT128371    AEE63329.1    GDIP01244410    JAI78991.1    APGK01026301    KB740624    ENN79965.1    GDKW01003189    JAI53406.1    CP026261    AWP19328.1    KB632335    ERL92789.1    KZ288311    PBC28459.1    GGMR01016870    MBY29489.1    AYCK01015888    AERX01007407    AK341906    BAH72148.1    ABLF02026088    GBHO01029817    GBHO01029812    GBRD01006108    JAG13787.1    JAG13792.1    JAG59713.1    GBYX01444761    JAO36659.1    KQ434772    KZC03915.1    NEVH01024949    PNF16441.1    GBRD01000893    JAG64928.1    GBHO01029814    JAG13790.1    GDRN01079587    JAI62371.1    GBHO01029813    JAG13791.1    GCES01062505    JAR23818.1    AMQN01003891    KB292163    ELU18039.1    HAEJ01004875    SBS45332.1    AYCK01007245    HADX01006887    SBP29119.1    HAED01015577    HAEE01009884    SBR02022.1    HADY01011722    SBP50207.1    HADZ01005799    HAEA01002026    SBP69740.1    HAEI01004392    SBR88580.1    AERX01007582    GBYX01444760    JAO36660.1    BT077126    ACO11550.1    HAEH01000447    SBR64908.1    HADW01003204    SBP04604.1    HAEF01006295    HAEG01004600    SBR43677.1    KQ976692    KYM77891.1    ADTU01018871    GCES01062504    JAR23819.1    GEBQ01007414    JAT32563.1    GBYB01014579    JAG84346.1   

Proteomes

UP000005204    UP000053268    UP000037510    UP000218220    UP000007151    UP000000305    + More
UP000076858    UP000019118    UP000261600    UP000246464    UP000242638    UP000261400    UP000030742    UP000242457    UP000261660    UP000261640    UP000005203    UP000261380    UP000257200    UP000261520    UP000028760    UP000261340    UP000192220    UP000005207    UP000264820    UP000261480    UP000007819    UP000007635    UP000257160    UP000265040    UP000076502    UP000265120    UP000005226    UP000261500    UP000235965    UP000261360    UP000265020    UP000261420    UP000002852    UP000014760    UP000265080    UP000001038    UP000261460    UP000264840    UP000265100    UP000265160    UP000261620    UP000265180    UP000265200    UP000078540    UP000005205    UP000265000    UP000261580   

PRIDE

H9JJ78   

Pfam

PF06888   Put_Phosphatase

Interpro

IPR016965   Pase_PHOSPHO-typ        + More
IPR006384   PyrdxlP_Pase-rel       
IPR036412   HAD-like_sf       
IPR023214   HAD_sf       
IPR029034   Cystine-knot_cytokine       

SUPFAM

SSF56784   SSF56784       

Gene 3D

3.40.50.1000     2.10.90.10    

ProteinModelPortal

H9JJ78   A0A194QFI6   A0A0L7KSZ1   A0A2A4JRX0   A0A212FBW3   A0A2H1VML4   + More
A0A2W1BHF5   A0A2P2I3B9   A0A2H8TVU7   E9G2T8   A0A0P5UF79   A0A162P635   A0A0P6ITD6   J3JYP1   A0A0P4XE87   N6UE28   A0A0P4VNS8   A0A3Q3KR18   A0A2U9CRV8   A0A3P9QFU7   A0A3B5BG61   U4UFM8   A0A2A3EB76   A0A3Q3EJ82   A0A3Q3NB98   A0A088A276   A0A2S2PJ61   A0A3B5LCF9   A0A3Q1G1Q8   A0A3B3ZXX6   A0A087YQK8   A0A3Q3MLW1   A0A3Q0RHK5   A0A2I4CDN7   I3KXX3   A0A3Q2Y961   A0A3B3Z081   C4WW78   J9K4I9   G3P3B8   A0A3Q1D061   A0A3Q3QV54   A0A0A9WZ77   A0A0S7HAZ4   A0A3Q1H0T8   A0A154NW46   A0A3P8WNL4   H2UYE6   A0A3B3U7I2   A0A3Q1JML6   A0A2J7PJC8   A0A0K8TH61   A0A0A9X9L4   A0A0P4W1U5   A0A3B4WI69   A0A0A9X299   A0A3Q2CX20   A0A3B4VPF3   M4AZ91   A0A154MKD9   R7VHD7   A0A3P8RY01   H2LD81   A0A3B3VGX4   A0A3B3WMG5   A0A1A8UDE6   A0A087YPW4   A0A3B4G3R5   A0A3Q2W6W7   A0A3P8NB51   A0A3P9D830   A0A3Q3XKJ5   A0A3P8VAU9   A0A1A7YG39   A0A1A8IXG1   A0A1A8A511   A0A1A8BT90   A0A1A8Q469   I3KYN6   M4AZL9   A0A0S7H697   A0A3P9NS49   A0A3B5MHQ9   C1BR97   A0A1A8N758   A0A1A7WGE7   A0A3P9KKB1   A0A1A8LGF0   A0A3P9H204   A0A195B0A7   A0A158NKU6   A0A146W466   A0A3Q2QMZ8   A0A3B4VG10   A0A1B6M9F2   A0A3Q4HYB8   A0A0C9RDB3  

KEGG

101745817    K13248 pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74] | (RefSeq) pyridoxal phosphate phospha

PATHWAY

00750    Vitamin B6 metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016791   GO:0008152   GO:0006468   GO:0006418   GO:0005634   GO:0006303   GO:0003824   GO:0016491   GO:0015930  

PANTHER

PTHR20889  

Length:

235

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0042

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01376

outside

1  -  235

 

 

Pi

150.874172

Theta

135.939315

Tajima's D

0.134013

CLR

29.117215

CSRT

0.401229938503075

Interpretation

Uncertain