Silkworm Genome Informatics Database

Gene

KWMTBOMO14653

Pre Gene Modal

BGIBMGA003354

Annotation

hypothetical_protein_ANCDUO_02957_[Ancylostoma_duodenale]

Location

Bomo_Chr24(-):12045933-12050931 View in EpiBrowser

Full name

ATP-dependent DNA helicase

Location in the cell

Nuclear Reliability : 2.634

CDS

ATGCCACGCAAACGTAAATCCAATCTAAGCCGTAGTTCTAGCAGAGCTCGAACTGCAAAAGTTGCTAGAAGCCAAGAATCTGAAGAGCAGACTCAGACGCGTCAGATGTTAGATTCTCAGCGTCATGCGACTCAAAGAGCTTCTGAGACCTATACGCAGACTCAAGCCCGTAGGACCTTAGATGCTGAGCGCCACGCATCTCAAAGGGCCTCTGAGACGTTTACACAGACTCAAGCCCGTCAGGCCCTAGATGCTGAACGCCACGCATCTCAAAGAGCCTCTGAGACGTTTACGCAGACTGAGACCCGTCAGGCCCTGGATGCTGAACGCCACGCATCTCAAAGGGCCTCTGAGACCTATACGCAGACTCAAGCCCGACAAACCTTAGATGCTGAGCGCCACGCATTTCAAAGGGCCTCTGAGACGTTTACGCAGACTCAGGCCCGTCAGACCCTGGATGCTGAACGCCATGCATCTCAAAGAGCTGCTGAGACAGTGGAACAGACTCAGACACGTCGAGTTTTAGATGCCGAACGTCACGCGCAATTGATTGCGGCAGAGACTGACGAAGATTCACAAAGACGACGTCTTTTAAATGCTGAACGGCAGGCAGAAAGAAGACGTACGTTTTCAATGAGTACGTGGGAGGCATTTAATGGTGCCGCTTTTGAGTATGACCCTTTGATCGACTATGTTAATCACCGATTGGTTATCATTGGGAGAATGGATAAAAAATGCAGATATTGTGAAGCACTGAAATGGAAAGAAGAAACTCCAGCACTAGAAAGAATGCCGGGAGAGGATTATAGGTTGGTGATGCACCCCGATCGCACACCAAGTGGGGAACATGAAAGGCGGTATAATGCACCGTTAATAAATGAAGTCGCAGCCTTGGTTACAGGCGAACAGTTTGCTTTCCGTGATATAGTTTTACAGGCCCGAGATGACACGTTAACCAGGGTGCCTGATACTCATAAATTTTATGATGCGTTGCAATATCCGATCATATTTAGTAAGGGACAAGAGGGGTACCACTTTCAAGTTCCTCAAATTAATCCTGTAACAGGTCTTCCCTTGCATAACAAAAAGGTTTCATGCATGGATTTTTATGCCTACAACATGATGATACGAGAAAACAACTTTAACATTGTACAAAGATGCAAGCAACTGGCCAATCAGTTTTACGTTGACATGTACGTTAAAGTTGAAAGCGAGAGGTTACGGTACATATCATTAAATCAAACTAAACTAAGAGCAGAGAATTACATCCATCTTCAAGACGCTGTGGCAAATGACGCTAATTTAAATCCAAATAACTTAGGTCGTATGGTCATTTTACCATCTTCATTTGTAAATAGCCCGCGGTACTTACACGAATATACTCAGGACGCGTTTGTTTATGTGCGTACACATGATCGCCCTGACTTATTCGTCACCTTTACTTGCAACCCAGCCTGGCCCGAAATAGTCAATCAGTTGATGCCGGGGCAAAGCGCAATAGATAGAGATGATGTAGTCGCAAGAGTTTTTAGACTAAAAGTTAAAAAACTAATGGATGTGATTAATAAAGGCCGAGTGTTCAGAGAAGCGCGCTGCTTTATGTACTCCGTCGAATGGCAGAAACGTGGACTGCCACATGTCCATATATTATTGTGGTTAAAAGATAAGTTACGACCCGATCAAATAGATAACATAATCAGCGCTGAAATACCGGATCCTAACATTGACAAGACTCTCCATGACGTTATTGTAAAAAATATGATTCACGGTCCATGCGGACCCGAAAATCCACAGTGCCACTGCATGAAAGACGGAAAATGCACAAAAAAATTTCCTCGCAAATTACAAGAGCAAAATCCCAATGTCACGTACAGTGATTTAATTTACAATGAGGGTCTGACAAAAATTGAAGACCAGGTTAAAACAATTTCTAGAAAGGATTTATCAGATTATGGAATGATCAGACCACAGAGAACCGAGGAAATCAGTAGCGATTTAATACGGGAACTAGATTACGATACTGCTTCCTTACAACAACAATTGACAGAGTCTGTTCCACGTTTGATCCCAGAACAAAGGTTAGTATTTGACAATGTTTTCAAAAAAATCGAAGATGGCGAAGGTGGTTTGTTATTTTTGGATGCTCCCGGAGGCACGGGAAAAACCTTTCTTTTAAACTTGCTTTTAGCGCAAATCCGAAAAGATAAAGGAATTGCTGTAGCAGTTGCCTCTTTCGGAATAGCCGCCACTCTGCTCAATGGTGGTCGAACGGCACATTCGGTGCTTAAACTGCCATTAAACTTAGCCCATGAAGAAATGCCAGTCTGTAATATAAGTAAAAACAGCGAGCGTGGACGTATGTTGCAGCAATGTAAATTATTAGTTTGGGATGAGTGTACTATGTCCCATAAAAGAGCAATTGAAGCTCTAGATCGGACTTTGAAAGACATCAAGAGTAATCCAAATATCATGGGGGGGATGGTGGTACTTTTAGCGGGCGATTTTAGACAGACTTTGCCGGTTATCACTAAAGGCACCCCTGCAGATGAAATAAATGCGTGTTTAAAAGCGTCAACGTTATGGGTGCACGTAAAAACGTTTAGTCTGTCTACAAATATGAGAGTGCAACTACACAATGATGTACAATCTGGACAATATGCTGCTGCTCTTCTTAAAATTGGAGAAGATCGTATGGCAAAGGATGGTAATGGCATGATTACATTGGATCGTGAATTCTGCAATGTTGTGCATAATCCAGATGATCTAAATAACTTCGTCTATAGCGAACTGCTAACTAATATGAGGAATAGAGACTGGTTATGTGAAAGAGCAATTTTAGGGCCGACGAATGAAATGGTGGGACAGATAAACGAGCAAATTATGTCACGTGTGGAAGGTGATATTGTTGAGTTTCTCTCTGTAGACACTGTAATGGATACTGAACAAGTAACATCATACCCTGTAGAATTTCTTAATTCTTTAGAACTGTTGGGAGTACCTTCACACAAACTGAGGCTGAAAGTAGGCGTTACTGTCCTTTTAATTCGGAATTTAGATGCACCAAGACTGTGTAATGGCACACGGTTGCAAGTGACACACCTCGGTCGCAATATTGTAAAAGCAATCATTATGACTGGAATGGCAAAAGGAGAGAACGTTTTAATCCCCCGTATACCCATAATTCCGACAGATTTGCCATTCCAGTTTAAGAGATTACAGTTTCCGCTGAAAATCGCATTCGCTATGACGATAAATAAAGCTCAGGGGCAAACATTAAAAGTAGCCGGCATTAATTTAGAAAAGAGTTGTTTTTCTCACGGACAATTATACGTGGCTTGCTCACGTGTTTCAAGTCCACAGAATCTCCATGTGTTGGCCAGAGAGGGAAAAACAAAGAACATAGTTTACAAAAATGTACTACAGTAA

Protein

MPRKRKSNLSRSSSRARTAKVARSQESEEQTQTRQMLDSQRHATQRASETYTQTQARRTLDAERHASQRASETFTQTQARQALDAERHASQRASETFTQTETRQALDAERHASQRASETYTQTQARQTLDAERHAFQRASETFTQTQARQTLDAERHASQRAAETVEQTQTRRVLDAERHAQLIAAETDEDSQRRRLLNAERQAERRRTFSMSTWEAFNGAAFEYDPLIDYVNHRLVIIGRMDKKCRYCEALKWKEETPALERMPGEDYRLVMHPDRTPSGEHERRYNAPLINEVAALVTGEQFAFRDIVLQARDDTLTRVPDTHKFYDALQYPIIFSKGQEGYHFQVPQINPVTGLPLHNKKVSCMDFYAYNMMIRENNFNIVQRCKQLANQFYVDMYVKVESERLRYISLNQTKLRAENYIHLQDAVANDANLNPNNLGRMVILPSSFVNSPRYLHEYTQDAFVYVRTHDRPDLFVTFTCNPAWPEIVNQLMPGQSAIDRDDVVARVFRLKVKKLMDVINKGRVFREARCFMYSVEWQKRGLPHVHILLWLKDKLRPDQIDNIISAEIPDPNIDKTLHDVIVKNMIHGPCGPENPQCHCMKDGKCTKKFPRKLQEQNPNVTYSDLIYNEGLTKIEDQVKTISRKDLSDYGMIRPQRTEEISSDLIRELDYDTASLQQQLTESVPRLIPEQRLVFDNVFKKIEDGEGGLLFLDAPGGTGKTFLLNLLLAQIRKDKGIAVAVASFGIAATLLNGGRTAHSVLKLPLNLAHEEMPVCNISKNSERGRMLQQCKLLVWDECTMSHKRAIEALDRTLKDIKSNPNIMGGMVVLLAGDFRQTLPVITKGTPADEINACLKASTLWVHVKTFSLSTNMRVQLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREFCNVVHNPDDLNNFVYSELLTNMRNRDWLCERAILGPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELLGVPSHKLRLKVGVTVLLIRNLDAPRLCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTDLPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSCFSHGQLYVACSRVSSPQNLHVLAREGKTKNIVYKNVLQ

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the helicase family.

Uniprot

A0A0C2GYY1 A0A0C2G2C8 A0A3P6GMY7

EC Number

3.6.4.12

EMBL

KN727000 KIH66715.1 KN747262 KIH51216.1 LR031880 VDD61206.1 + More

Pfam

PF14214 Helitron_like_N + More
PF05970 PIF1

Interpro

IPR027417   P-loop_NTPase        + More
IPR025476   Helitron_helicase-like
IPR010285   DNA_helicase_pif1-like

SUPFAM

SSF52540 SSF52540

ProteinModelPortal

A0A0C2GYY1 A0A0C2G2C8 A0A3P6GMY7

PDB

5FHH E-value=8.87618e-20, Score=243

KEGG

101741794 no KO assigned | (RefSeq) uncharacterized LOC101741794

GO

GO:0003678 GO:0000723 GO:0006310 GO:0005524 GO:0006281 GO:0004386 GO:0016020 GO:0004970 GO:0005234 GO:0003824 GO:0008152 GO:0016491 GO:0015930

Length:

1141

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.95458

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00029

outside

1 - 1141

Pi

352.228829

Theta

222.457772

Tajima's D

3.661507

CLR

0.159389

CSRT

0.995700214989251

Interpretation

Possibly Balancing Selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree