SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14649
Pre Gene Modal
BGIBMGA009599
Annotation
hypothetical_protein_KGM_17295_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.202 Nuclear   Reliability : 1.284
 

Sequence

CDS
ATGGAAGCTATCACTAATATGGAGCAAAATTCGGTTGGTAATACCGACGTTCTGGTCTCCGTACGGGGGCACCAACCTAACGCGAAGAACGACAGCACCAAAGACTGGACTCTGTGCCTACGCAAGAAAGACGTTGACCACACTTCAAGCCAGGATATCTCCGCATTTCCGGCGTCTTATGAAGGCCACGTGACTTTAACGTATGGCTTAAACCACACGAAATGCTTCGAGAAAAGCTCGACTAGTGAGCTCATGCTGAAATACAAGGGAGTACCACAACATCATCAAGGCAAACTCGAACGCTATTTCGAGATTAATGTTTACGGGAAAAATATATCAGAAATTGGGCTACTGAATTCCGATGTCATTAAACAGACCGCCCTTGGGCAGCTTCTAAGGAGTTACAGTAAAGAAGTTTTCAATATTACAATTATTATAAAGGAAAGAGACGGCCTGGCGTCTCTGAGTGTGAACAGAGGAGCCGAAATCCAGTTCAAATCCGACAATTTCGCTTGGCTTCTGGACGGTTGGACCGGTATGCAGGTGGTTCGAACCATAGGACTTTATCGTGAATGCCGCATTAAGGAGAATGAAATCAAAACTCTTTCTGGTACAACGGAAGATCTCCCGTCCATTGACTGTCAGGAGACACTCGCTCTTGCCGACTGCAGCGATAACTCGCCAAGGTTCGCAGTGATAAGGTACATAGATGGCATCAAAGTGTTCTCCGGTGGCTATTCTGTGTCCGTCAAGAAGAACCAGAGCGAAATATACGTGGATGACACTTACGCTGGTAACGATTTCTGGATTTCAGCGAAGAGTAAAACGAAGATTACCTCCAAAATGACAGCCCTTAAAGTGTATTACGATTTGAACGAGACCGTCATATTAGTGCCGCTTATGTATTTGAACAATGTCTGCGGCTTGTGTACAGAGCCCCTAGAGTATAATGTATGTTAA
Protein
MEAITNMEQNSVGNTDVLVSVRGHQPNAKNDSTKDWTLCLRKKDVDHTSSQDISAFPASYEGHVTLTYGLNHTKCFEKSSTSELMLKYKGVPQHHQGKLERYFEINVYGKNISEIGLLNSDVIKQTALGQLLRSYSKEVFNITIIIKERDGLASLSVNRGAEIQFKSDNFAWLLDGWTGMQVVRTIGLYRECRIKENEIKTLSGTTEDLPSIDCQETLALADCSDNSPRFAVIRYIDGIKVFSGGYSVSVKKNQSEIYVDDTYAGNDFWISAKSKTKITSKMTALKVYYDLNETVILVPLMYLNNVCGLCTEPLEYNVC

Summary

Pfam
PF01347   Vitellogenin_N        + More
PF09172   DUF1943
Interpro
IPR011030   Lipovitellin_superhlx_dom        + More
IPR001747   Lipid_transpt_N       
IPR015819   Lipid_transp_b-sht_shell       
IPR015816   Vitellinogen_b-sht_N       
IPR015255   Vitellinogen_open_b-sht       
SUPFAM
SSF48431   SSF48431        + More
SSF56968   SSF56968       
Gene 3D

Ontologies

Topology

Length:
319
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.09791
Exp number, first 60 AAs:
8e-05
Total prob of N-in:
0.05200
outside
1  -  319
 
 

Population Genetic Test Statistics

Pi
203.278083
Theta
176.488534
Tajima's D
-1.659747
CLR
1284.789372
CSRT
0.0447977601119944
Interpretation
Possibly Positive selection
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