Gene

KWMTBOMO14647  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009598

Annotation

acyl-CoA_dehydrogenase_family_member_9_[Agrotis_segetum]

Location

Bomo_Chr24(+):11870169-11879645      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.679 Mitochondrial   Reliability : 1.092

CDS

ATGCTTGTCCTGTGCAAAGTCGAAGCCGACCACCTGAAAGCTTTCCTCGTCCATCCGGGGGCTACCGGCGTGACCTTCGACGGAAACTTCGTTCATTTCCAGAAAACAACCGGTACACCCCTCTCGCAAATACCCAACGCTGATCTAGGCAAGATATTCGGTATCTCTCGTCTCCATGCCGCCACGCTGTGCCGCTGCCAACTCAAGTATGCAATCAGCAAGATTGTGGAGTACGTCAAGCCCAGGTCATTCTCCGGTAAACCTCTTGCGGAGTTGTCGACGATACGAGCAATAGTTGGAGAGTCGTTGCTCCATGTGTACGCCAGTGAAAGTACCGAGTACTTCACAGCCGGACTCATAGACGGATACGTGGATCCGGACGCGGAATTGGAGATGGCCATGTGCAGGAATTACATCAACAGTCGTGGTCTATTTTCCCTGATCAATCTCCTGGAAATTCCTGCTCTAGAACAAGAGGAGGAGTGCAAGAAGATTTTTGATCGGATGAGGATCCTCGCGAGCGGGGGCGAAAGTTTAGATGGAATTAATACTTTTATAGCCTTAAACGGAATTCACCACGCCGGCAAGATTATGGCGGAAGAGATCAAACAAATAAGGAATCCTTTGATGCATCCCGCTTTCATCATCAAGAAGGCTCTGTCAAATAGACATCAAGTCAAGGATGACCCGAAACTGACTCTCCACTTGTCAGAGCACCTTCACCCGACCCTCAAGCCGGCGTCAGATCAGCTCGAGTACTGCGTCCTCAGGATGAGGTTCGCTTGCGAAACCCTAATGTCCAGGCACGGAATGGAAGTTTCTGTGGCGTACATGGAACTGAAGAGATTAGCCGAAGCAGCCACGCTGATCTTGGCCATGACCTCGGTTCTGGCGAGGGCTTCAAGGGCATACTGCATAGGTCTTCGCAACGCGGAGATCGAAATGAAGCTGGCCACGTGCTTCGTGAGCAAAACGATATCCGAAGTTCGTCAGCTGATACTGGACATAGACAACGGGGAGTTTCTGAACCACGACCGGTTCAAGGTCGAGTTCGGCAGGAAGGTCCTCGACACTAACACCGTGCTGGTGGAGCGGCCCACTTCGAGGGTCTTCTGGTGA

Protein

MLVLCKVEADHLKAFLVHPGATGVTFDGNFVHFQKTTGTPLSQIPNADLGKIFGISRLHAATLCRCQLKYAISKIVEYVKPRSFSGKPLAELSTIRAIVGESLLHVYASESTEYFTAGLIDGYVDPDAELEMAMCRNYINSRGLFSLINLLEIPALEQEEECKKIFDRMRILASGGESLDGINTFIALNGIHHAGKIMAEEIKQIRNPLMHPAFIIKKALSNRHQVKDDPKLTLHLSEHLHPTLKPASDQLEYCVLRMRFACETLMSRHGMEVSVAYMELKRLAEAATLILAMTSVLARASRAYCIGLRNAEIEMKLATCFVSKTISEVRQLILDIDNGEFLNHDRFKVEFGRKVLDTNTVLVERPTSRVFW

Cofactor

FAD

Similarity

Belongs to the acyl-CoA dehydrogenase family.

Uniprot

H9JJ97   A0A068FMM6   A0A2H1VD80   S4P7W8   A0A194QA12   A0A3S2LUW0   + More
A0A2W1BGC2   A0A212F861   A0A1B6MSJ1   A0A1B6HKK5   A0A2J7PLI8   A0A1B6GAU8   A0A1Y1M8F1   A0A0P4VTR5   A0A1W4WI49   A0A2P8YZD6   A0A182QME8   D6WCN5   A0A182N185   A0A182W5I5   N6TGU7   A0A182M3Y3   A0A0K8W6B3   A0A182RHH5   A0A034VC74   Q16II2   A0A1S4FZV2   A0A182KA86   A0A0L0CDI0   E9GET6   A0A034VEH1   A0A182XXS9   A0A034VH73   A0A0A1WRY3   Q5U117   B4P629   A0A336KA01   Q7QFF7   A0A182IAQ4   A0A1W4UI88   A0A182TUM5   A0A0Q9WSP4   B4MYH7   A0A182PBI0   A0A2P2I242   A0A0J9RAD1   A0A1Q3FDR2   B3MFC9   A0A151X2Z5   A0A182JHX0   B3NSE6   A0A0K8RMR8   A0A084VLS1   A0A1A9ZE31   A0A1B0FE24   A0A1B0AZK8   A0A131XY15   F4W597   A0A158NYS1   B4HNJ3   A0A3B0J1D8   W8CA16   A0A1A9YMZ1   A0A182H1V6   A0A195CWJ0   T1PE29   A0A1I8N1S7   B0W9I4   A0A1L8DZ50   A0A1L8DYL7   A0A182T7F2   A0A146M9B6   A0A0K8SJP2   A0A0A9YYK3   A0A2M4BH07   A0A2M4BH04   A0A195FTB2   A0A151JS57   T1DK12   A0A224XNJ0   A0A1S3DQR8   A0A226F0J2   Q291I3   B4GAP0   A0A3L8DVR3   A0A026WQ53   A0A0L8I854   E2AX03   A0A2M3Z764   A0A2M3Z7A7   A0A1I8PMF5   A0A293N393   A0A2R5L550  

Pubmed

19121390    26385554    23622113    26354079    28756777    22118469    + More
28004739    29403074    18362917    19820115    23537049    25348373    17510324    26108605    21292972    25244985    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    17550304    12364791    14747013    17210077    22936249    24438588    21719571    21347285    24495485    26483478    25315136    26823975    25401762    15632085    30249741    24508170    20798317   

EMBL

BABH01036317    BABH01036318    KJ622081    AID66671.1    ODYU01001918    SOQ38795.1    + More
GAIX01004409    JAA88151.1    KQ459249    KPJ02259.1    RSAL01000199    RVE44523.1    KZ150246    PZC71876.1    AGBW02009794    OWR49911.1    GEBQ01001099    JAT38878.1    GECU01032486    JAS75220.1    NEVH01024425    PNF17179.1    GECZ01010376    JAS59393.1    GEZM01037409    JAV82072.1    GDRN01097621    JAI59098.1    PYGN01000272    PSN49598.1    AXCN02001235    KQ971317    EEZ98802.2    APGK01027806    KB740671    KB632093    ENN79634.1    ERL88672.1    AXCM01000594    GDHF01005702    JAI46612.1    GAKP01018048    GAKP01018046    JAC40906.1    CH478075    EAT34074.1    JRES01000655    KNC29529.1    GL732541    EFX81893.1    GAKP01018043    JAC40909.1    GAKP01018049    JAC40903.1    GBXI01013022    JAD01270.1    AE013599    BT016075    AAF58637.1    AAV36960.1    CM000158    EDW90904.1    UFQS01000201    UFQT01000201    SSX01267.1    SSX21647.1    AAAB01008846    EAA06771.4    APCN01001305    CH963894    KRF98589.1    EDW77166.1    IACF01002269    LAB67930.1    CM002911    KMY93013.1    GFDL01009403    JAV25642.1    CH902619    EDV35603.1    KQ982566    KYQ54753.1    CH954179    EDV56448.1    GADI01001979    JAA71829.1    ATLV01014548    KE524974    KFB38915.1    CCAG010004895    JXJN01006356    GEFM01004681    JAP71115.1    GL887645    EGI70547.1    ADTU01004236    CH480816    EDW47429.1    OUUW01000001    SPP74705.1    GAMC01006161    JAC00395.1    JXUM01103963    JXUM01103964    KQ564847    KXJ71654.1    KQ977220    KYN04902.1    KA646976    AFP61605.1    DS231864    EDS40209.1    GFDF01002341    JAV11743.1    GFDF01002524    JAV11560.1    GDHC01002268    JAQ16361.1    GBRD01012430    JAG53394.1    GBHO01006295    JAG37309.1    GGFJ01003199    MBW52340.1    GGFJ01003198    MBW52339.1    KQ981276    KYN43693.1    KQ978543    KYN30218.1    GAMD01001181    JAB00410.1    GFTR01006426    JAW10000.1    LNIX01000001    OXA62998.1    CM000071    EAL25129.2    CH479181    EDW31992.1    QOIP01000003    RLU24534.1    KK107151    EZA57234.1    KQ416373    KOF97205.1    GL443495    EFN62023.1    GGFM01003579    MBW24330.1    GGFM01003577    MBW24328.1    GFWV01022795    MAA47522.1    GGLE01000454    MBY04580.1   

Proteomes

UP000005204    UP000053268    UP000283053    UP000007151    UP000235965    UP000192223    + More
UP000245037    UP000075886    UP000007266    UP000075884    UP000075920    UP000019118    UP000030742    UP000075883    UP000075900    UP000008820    UP000075881    UP000037069    UP000000305    UP000076408    UP000000803    UP000002282    UP000007062    UP000075840    UP000192221    UP000075902    UP000007798    UP000075885    UP000007801    UP000075809    UP000075880    UP000008711    UP000030765    UP000092445    UP000092444    UP000092460    UP000007755    UP000005205    UP000001292    UP000268350    UP000092443    UP000069940    UP000249989    UP000078542    UP000095301    UP000002320    UP000075901    UP000078541    UP000078492    UP000079169    UP000198287    UP000001819    UP000008744    UP000279307    UP000053097    UP000053454    UP000000311    UP000095300   

PRIDE

H9JJ97   

Pfam

PF00441   Acyl-CoA_dh_1        + More
PF02771   Acyl-CoA_dh_N
PF02770   Acyl-CoA_dh_M

Interpro

IPR037069   AcylCoA_DH/ox_N_sf        + More
IPR036250   AcylCo_DH-like_C       
IPR009100   AcylCoA_DH/oxidase_NM_dom       
IPR009075   AcylCo_DH/oxidase_C       
IPR006091   Acyl-CoA_Oxase/DH_cen-dom       
IPR013786   AcylCoA_DH/ox_N       
IPR006089   Acyl-CoA_DH_CS       

SUPFAM

SSF56645   SSF56645        + More
SSF47203   SSF47203       

Gene 3D

1.10.540.10    

ProteinModelPortal

H9JJ97   A0A068FMM6   A0A2H1VD80   S4P7W8   A0A194QA12   A0A3S2LUW0   + More
A0A2W1BGC2   A0A212F861   A0A1B6MSJ1   A0A1B6HKK5   A0A2J7PLI8   A0A1B6GAU8   A0A1Y1M8F1   A0A0P4VTR5   A0A1W4WI49   A0A2P8YZD6   A0A182QME8   D6WCN5   A0A182N185   A0A182W5I5   N6TGU7   A0A182M3Y3   A0A0K8W6B3   A0A182RHH5   A0A034VC74   Q16II2   A0A1S4FZV2   A0A182KA86   A0A0L0CDI0   E9GET6   A0A034VEH1   A0A182XXS9   A0A034VH73   A0A0A1WRY3   Q5U117   B4P629   A0A336KA01   Q7QFF7   A0A182IAQ4   A0A1W4UI88   A0A182TUM5   A0A0Q9WSP4   B4MYH7   A0A182PBI0   A0A2P2I242   A0A0J9RAD1   A0A1Q3FDR2   B3MFC9   A0A151X2Z5   A0A182JHX0   B3NSE6   A0A0K8RMR8   A0A084VLS1   A0A1A9ZE31   A0A1B0FE24   A0A1B0AZK8   A0A131XY15   F4W597   A0A158NYS1   B4HNJ3   A0A3B0J1D8   W8CA16   A0A1A9YMZ1   A0A182H1V6   A0A195CWJ0   T1PE29   A0A1I8N1S7   B0W9I4   A0A1L8DZ50   A0A1L8DYL7   A0A182T7F2   A0A146M9B6   A0A0K8SJP2   A0A0A9YYK3   A0A2M4BH07   A0A2M4BH04   A0A195FTB2   A0A151JS57   T1DK12   A0A224XNJ0   A0A1S3DQR8   A0A226F0J2   Q291I3   B4GAP0   A0A3L8DVR3   A0A026WQ53   A0A0L8I854   E2AX03   A0A2M3Z764   A0A2M3Z7A7   A0A1I8PMF5   A0A293N393   A0A2R5L550  

PDB

2UXW     E-value=8.6718e-07,     Score=126

KEGG

101743932    no KO assigned | (RefSeq) acyl-CoA dehydrogenase family member 9, mitochondrial

GO

GO:0050660   GO:0016627   GO:0003995   GO:0005739   GO:0000062   GO:0017099   GO:0034976   GO:0001745   GO:0055088   GO:0005615   GO:0006635   GO:0032504   GO:1900408   GO:0009055   GO:0033539   GO:0016491   GO:0005216   GO:0006811   GO:0016020   GO:0004970   GO:0005234   GO:0003824   GO:0008152   GO:0015930   GO:0055114  

Length:

372

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.33565

Exp number, first 60 AAs:

0.03651

Total prob of N-in:

0.00925

outside

1  -  372

 

 

Pi

214.370493

Theta

159.665032

Tajima's D

0.884899

CLR

0.411483

CSRT

0.631818409079546

Interpretation

Uncertain