Gene

KWMTBOMO14646  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009598

Annotation

acyl-CoA_dehydrogenase_family_member_9_[Agrotis_segetum]

Location

Bomo_Chr24(+):11867249-11868803      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.736 Nuclear   Reliability : 1.675

CDS

ATGAATATCGCCCGTACGTTATGCGTGAAACAGTTAAACGGTATAAGTAGAACTATATCCAGGAAGATCGGTTTTACGGCCACAAATTACGAAGCTACCAACGCCGTTCAGCCTAAAATCCAAGAAGAAAAGTTCGACTTCGAGGACCTACAGGTAATCGAACGTACTGAGCAGAGGAAACCCAAAATACCACCATTTATGAAGGATGTCTTCGTGTCCGTATTCCAACGCGACTTACTCGCCTACCCGGAGATTTTGGACAAAGAGGAGACCGAAAGCATGGAGAAGAGAGCCGAAACGCTAGACAAAGTGTTCCAAGACAAAACGAAATCGAAAGAGGAACGTAGGAATGTTTTGAAAAGTACCAAAATGTATGCAGCACCCGTTAATTGGACTAGGAATGGCTTGGCAGCTAATCAAACGGAAAGCATAAGGTATTTAGAAACCGTATCCCCAGACTTCGAATTGGCTCATGAGCTCAGTGACCACTGGGTCGCGTTGCGTGCCCTTCAACACGGACTGACTGCGGAACAGTATGCGGCTGTAATTGATGAACTGTCGACGGGAGATGCAACAGTAACTTTATGCATCAAAGAGAGAATCGCTGAAAGATTGGCCCAGCCCGATTTTAGGACAACCGCTACTTTGGATGCCCAAGGTTCAGATATTGATGATTGTTTTTATTGCTATGGGTGGGTGAGCTCACGATCCACATGGTATTAA

Protein

MNIARTLCVKQLNGISRTISRKIGFTATNYEATNAVQPKIQEEKFDFEDLQVIERTEQRKPKIPPFMKDVFVSVFQRDLLAYPEILDKEETESMEKRAETLDKVFQDKTKSKEERRNVLKSTKMYAAPVNWTRNGLAANQTESIRYLETVSPDFELAHELSDHWVALRALQHGLTAEQYAAVIDELSTGDATVTLCIKERIAERLAQPDFRTTATLDAQGSDIDDCFYCYGWVSSRSTWY

Cofactor

FAD

Similarity

Belongs to the acyl-CoA dehydrogenase family.

Uniprot

H9JJ97   A0A068FMM6   A0A2H1VD80   A0A2A4J9L0   A0A3S2LUW0   A0A194QA12   + More
A0A2W1BGC2   A0A0N1IPU0   A0A212F0J5   A0A0P5IBI7   A0A0P5AU17   A0A0P5I8G2   A0A0P5BW91   A0A0P6G930   A0A0P5TRD5   A0A0P4YF25   A0A0P4XXM3   A0A0P4Y0J7   A0A0T6AYF7   A0A1Y1M8F1   A0A0P4VTR5   A0A3R7PS20   K1QHQ6   A0A067R920   A0A0P5RRW3   A0A1W4WI49   A0A1S3H6P3   A0A293N393   A0A131Z0V1   A0A224Z5D4   A0A0L8I854   A0A3L8DVR3   V4A3Y5   A0A2P2I242   Q5U117   A0A336KA01   A0A1Q3FDR2   A0A182H1V6   B0W9I4   A0A3B0J1D8   A0A1L8DZ50   A0A1B0FE24   A0A0X3PMA3   A0A0X3PEC4   E9IYQ3   R7V9B6   A0A182FJ78  

Pubmed

19121390    26385554    26354079    28756777    22118469    28004739    + More
22992520    24845553    26830274    28797301    30249741    23254933    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    21282665   

EMBL

BABH01036317    BABH01036318    KJ622081    AID66671.1    ODYU01001918    SOQ38795.1    + More
NWSH01002322    PCG68529.1    RSAL01000199    RVE44523.1    KQ459249    KPJ02259.1    KZ150246    PZC71876.1    KQ460253    KPJ16364.1    AGBW02011068    OWR47278.1    GDIQ01215802    JAK35923.1    GDIP01198770    JAJ24632.1    GDIQ01218104    JAK33621.1    GDIP01194327    JAJ29075.1    GDIP01240427    GDIQ01113589    GDIQ01038365    JAI82974.1    JAN56372.1    GDIP01128028    JAL75686.1    GDIP01238030    JAI85371.1    GDIP01236322    JAI87079.1    GDIP01238029    JAI85372.1    LJIG01022498    KRT80256.1    GEZM01037409    JAV82072.1    GDRN01097621    JAI59098.1    QCYY01001069    ROT80784.1    JH818449    EKC30684.1    KK852661    KDR19102.1    GDIQ01103932    JAL47794.1    GFWV01022795    MAA47522.1    GEDV01003504    JAP85053.1    GFPF01013279    MAA24425.1    KQ416373    KOF97205.1    QOIP01000003    RLU24534.1    KB202283    ESO91377.1    IACF01002269    LAB67930.1    AE013599    BT016075    AAF58637.1    AAV36960.1    UFQS01000201    UFQT01000201    SSX01267.1    SSX21647.1    GFDL01009403    JAV25642.1    JXUM01103963    JXUM01103964    KQ564847    KXJ71654.1    DS231864    EDS40209.1    OUUW01000001    SPP74705.1    GFDF01002341    JAV11743.1    CCAG010004895    GEEE01010170    JAP53055.1    GEEE01012924    JAP50301.1    GL767043    EFZ14310.1    AMQN01005445    KB296055    ELU12325.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000283509    UP000005408    UP000027135    UP000192223    UP000085678    UP000053454    UP000279307    UP000030746    UP000000803    UP000069940    UP000249989    UP000002320    UP000268350    UP000092444    UP000014760    UP000069272   

PRIDE

H9JJ97   

Pfam

PF00441   Acyl-CoA_dh_1        + More
PF02771   Acyl-CoA_dh_N
PF02770   Acyl-CoA_dh_M
PF07679   I-set
PF13855   LRR_8

Interpro

IPR037069   AcylCoA_DH/ox_N_sf        + More
IPR036250   AcylCo_DH-like_C       
IPR009100   AcylCoA_DH/oxidase_NM_dom       
IPR009075   AcylCo_DH/oxidase_C       
IPR013786   AcylCoA_DH/ox_N       
IPR006089   Acyl-CoA_DH_CS       
IPR006091   Acyl-CoA_Oxase/DH_cen-dom       
IPR013098   Ig_I-set       
IPR032675   LRR_dom_sf       
IPR013783   Ig-like_fold       
IPR000483   Cys-rich_flank_reg_C       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       

SUPFAM

SSF56645   SSF56645        + More
SSF47203   SSF47203       
SSF48726   SSF48726       

Gene 3D

1.10.540.10     2.60.40.10     3.80.10.10    

ProteinModelPortal

H9JJ97   A0A068FMM6   A0A2H1VD80   A0A2A4J9L0   A0A3S2LUW0   A0A194QA12   + More
A0A2W1BGC2   A0A0N1IPU0   A0A212F0J5   A0A0P5IBI7   A0A0P5AU17   A0A0P5I8G2   A0A0P5BW91   A0A0P6G930   A0A0P5TRD5   A0A0P4YF25   A0A0P4XXM3   A0A0P4Y0J7   A0A0T6AYF7   A0A1Y1M8F1   A0A0P4VTR5   A0A3R7PS20   K1QHQ6   A0A067R920   A0A0P5RRW3   A0A1W4WI49   A0A1S3H6P3   A0A293N393   A0A131Z0V1   A0A224Z5D4   A0A0L8I854   A0A3L8DVR3   V4A3Y5   A0A2P2I242   Q5U117   A0A336KA01   A0A1Q3FDR2   A0A182H1V6   B0W9I4   A0A3B0J1D8   A0A1L8DZ50   A0A1B0FE24   A0A0X3PMA3   A0A0X3PEC4   E9IYQ3   R7V9B6   A0A182FJ78  

KEGG

101743932    no KO assigned | (RefSeq) acyl-CoA dehydrogenase family member 9, mitochondrial

GO

GO:0050660   GO:0016627   GO:0003995   GO:0016491   GO:0034976   GO:0001745   GO:0055088   GO:0005615   GO:0006635   GO:0005739   GO:0032504   GO:1900408   GO:0016021   GO:0055114  

Length:

240

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00017

Exp number, first 60 AAs:

0.00017

Total prob of N-in:

0.17697

outside

1  -  240

 

 

Pi

388.85801

Theta

187.025371

Tajima's D

2.966018

CLR

0.155202

CSRT

0.978351082445878

Interpretation

Uncertain