Silkworm Genome Informatics Database

Gene

KWMTBOMO14637

Pre Gene Modal

BGIBMGA008655

Annotation

PREDICTED:_zinc_finger_protein_652_[Bombyx_mori]

Location

Bomo_Chr24(+):11718909-11721143 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.826

CDS

ATGGACGATGAAAAAGTGTTTACCTGCTCTCGCTGCAAGAAGGAGGGGGGCAGGAGCAGTTTGTGCAAGCGCTGCGACATTCTGGTCCCTTCGAAGATGATGAAGGCGCATTTGGAGTTGCACGTTGAAGCCGATTTACGAGGGAAAAGCCGATTACGTATACAGCCAAAAAAGGCTGCTCAAATTCGAGCCGCCAACCCGAAAGCCCGCGCCCTCGACAAATACGAATGCCTGCAGTGTCTCAAACGACACAAGGACGTCCGTGAGTATTTGAATCACATGAGGATCGCTCATAAAGTCTACACGATCTGCAAGGTGTGCGGGAGGGATATGAAGACGAAATTCTTCTTGGACAAGCATCTGTCGGCGCACCAGGGGAACGCATGCCGACACTAG

Protein

MDDEKVFTCSRCKKEGGRSSLCKRCDILVPSKMMKAHLELHVEADLRGKSRLRIQPKKAAQIRAANPKARALDKYECLQCLKRHKDVREYLNHMRIAHKVYTICKVCGRDMKTKFFLDKHLSAHQGNACRH

Uniprot

H9JGK8 A0A212F874 A0A2H1VG56 A0A2A4JRG6 A0A2W1B622 A0A0N0PDQ1 + More
A0A194QA16 A0A3B3RYU7 A0A3B3RYQ1 A0A3B3RYS1 A0A3B3RYT2 A0A158PG98 A0A2I4CJM8 A0A3B3SX52

Pubmed

19121390 22118469 28756777 26354079 29240929

EMBL

BABH01039141 BABH01039142 AGBW02009795 OWR49909.1 ODYU01002408 SOQ39850.1 + More
NWSH01000720 PCG74627.1 KZ150739 PZC70345.1 KQ460253 KPJ16359.1 KQ459249 KPJ02264.1 UYYA01003841 VDM56571.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000053240 UP000053268 UP000261540 + More
UP000050601 UP000267027 UP000192220

PRIDE

H9JGK8

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF12756   zf-C2H2_2
PF00651   BTB

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR012934   Znf_AD
IPR036280   Multihaem_cyt_sf
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2
IPR028424   HIC1
IPR000210   BTB/POZ_dom
IPR011333   SKP1/BTB/POZ_sf

SUPFAM

SSF57667   SSF57667        + More
SSF48695   SSF48695
SSF54695   SSF54695

ProteinModelPortal

H9JGK8 A0A212F874 A0A2H1VG56 A0A2A4JRG6 A0A2W1B622 A0A0N0PDQ1 + More
A0A194QA16 A0A3B3RYU7 A0A3B3RYQ1 A0A3B3RYS1 A0A3B3RYT2 A0A158PG98 A0A2I4CJM8 A0A3B3SX52

KEGG

101738253 no KO assigned | (RefSeq) zinc finger protein 652

GO

GO:0003676 GO:0008270 GO:0005634 GO:0016021 GO:0003700 GO:0000122 GO:0008630 GO:0046872 GO:0004175 GO:0006511 GO:0019773 GO:0005839 GO:0051603 GO:0003824 GO:0008152 GO:0016491 GO:0015930

PANTHER

PTHR24394:SF16

Length:

131

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.27216

outside

1 - 131

Pi

278.191484

Theta

198.348811

Tajima's D

1.175365

CLR

0

CSRT

0.706914654267287

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics