Gene

KWMTBOMO14634

Pre Gene Modal

BGIBMGA008641

Annotation

PREDICTED:_DNA/RNA-binding_protein_KIN17-like_[Bombyx_mori]

Location

Bomo_Chr24(-):11685178-11703178      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.128

CDS

ATGGGCGGGAAAGCGGAGAAAGGTACTCCGAAATACATCGCGAACAAAATAAAGGCTAAAGGCCTCCAGAAGCTGCGCTGGTACTGCCAGATGTGTCAGAAACAATGCCGCGACGAGAACGGCTTCAAATGCCACACGATGTCGGAGTCGCATCAGCGTCAACTGCTTCTATTCGCCGACAACGCTTCCAAATACATCGATCAGTTCTCCAAGGAGTTCTCTGACGGCTACGTCGAGTTGCTCAGCAGGCAGTTCGGTACGAAGAGGGTGAATGCTAACAAAGTCTACCAGGAGTACATTTCTAACAGAGATCACCTCCACATGAACGCAACGCAGTGGGAGACACTAACCGACTTTGTGAAATGGCTCGGTCGTGAAGGGAAGTGTGTTGTCGATGAAACCGAGAAGGGATGGTTTGTTACATACATAGACAGGGATCCTGCAGCAATCGCCGCCCAAGAAGCAAAAGCCAAGAAGGAGAAGATGGATAAGGATGATCAGGAAAGAATGTTGGAATTCATACAGAAGCAAGTGGAAAAGGGAAAAAAGGAGAATGATTCAAATATTGAACCAACGTACACGGAGCTCAAGAGAGAGAGTAGTCAGGAGCGATTGACCTTTAATCTCAACTTGAAGAGGAAAAATGAAGATAAAAAATCAGAGGTCCTGTCATCTTCGGCCTTGAAATCTCTGAAGAGTAAAGAGGATAGTAAGAGAATTAGAATAGAGGAGTCCACGAGCAGACAGTCAGCGCTCGATGAAATCATGAAAATGGAGGAGAAAGCTAAAGAGAAAGCTAATAGAAAAGATTATTGGCTGACCGAAGGGATAGTAGTCAAAATAGTTACGAAATCGTTGGGCGATAAGTTTTACAAGAGGAAGGCGGTCGTTGAGCGAGTCATCGATAAATACGGAGCCGAAGTGAGGATCGTTGATGAGAAGATCAAGCTGAAACTAGATCAGAACCATCTGGAGACTGTGGTGCCATCTTGCGGCCGTAAAGTTCGCGTCGTGAACGGAGCGTACCGGGGGTGCGTGGGCACGCTGCGAGACGTCCGCACCGACGCCTACAGCTGCGACATCGAAATAGCGGAGGGTCCTCTCACAGGTCGGCTGGTGAAGGGCGTGGAGTACGAAGACATATCGAAATTGGCTTCATGA

Protein

MGGKAEKGTPKYIANKIKAKGLQKLRWYCQMCQKQCRDENGFKCHTMSESHQRQLLLFADNASKYIDQFSKEFSDGYVELLSRQFGTKRVNANKVYQEYISNRDHLHMNATQWETLTDFVKWLGREGKCVVDETEKGWFVTYIDRDPAAIAAQEAKAKKEKMDKDDQERMLEFIQKQVEKGKKENDSNIEPTYTELKRESSQERLTFNLNLKRKNEDKKSEVLSSSALKSLKSKEDSKRIRIEESTSRQSALDEIMKMEEKAKEKANRKDYWLTEGIVVKIVTKSLGDKFYKRKAVVERVIDKYGAEVRIVDEKIKLKLDQNHLETVVPSCGRKVRVVNGAYRGCVGTLRDVRTDAYSCDIEIAEGPLTGRLVKGVEYEDISKLAS

Uniprot

A0A1E1WNN2   A0A212F856   A0A2W1BFL0   A0A2A4JSG1   A0A2H1VG81   A0A3S2LU78   + More
A0A194QFM1   E0VTJ7   A0A182GPQ7   A0A182YE29   A0A1B6LNC3   A0A182SFI0   A0A1B6GLL9   A0A2J7QXV1   A0A1B6HNE3   A0A0K8TR12   B4MLK3   Q7PGA1   W5JMU0   A0A182F462   Q17PQ1   A0A139WLR3   A0A1B6CFY9   A0A1Q3F6Z0   B0X0S8   A0A2P8XIC0   A0A1D2NF35   B3M977   A0A084WC81   A0A2R7W0Q7   A0A0A9XV33   A0A182W872   A0A146L1N4   A0A2J7Q0T7   B4KY22   A0A1I8N6I3   A0A1W4WSB3   A0A336LSL5   A0A1W4W6F0   Q2M0V0   A0A1Y1KE81   A0A034V9J6   A0A2J7Q0T3   B4PFA4   N6U4I1   W8BWQ4   A0A1I8NZB3   K1PM59   R4G5J3   A0A023F8J2   B4LGF0   A0A0M3QWH5   B3NIJ9   A0A3B0K9D8   A0A293LCC1   A0A1B0G835   A0A2R5LLB8   A0A224XRU7   A0A0K8UEI6   B4QRX4   B4IA87   A0A069DTK1   A0A1S3H5D1   A0A1A9X569   A0A1B0A177   A0A0V0GAD9   B4IWX3   A0A0N7Z916   A0A1A9XA23   A0A1B0AN23   U5EUW0   Q8SXR2   Q9VPH4   A0A1A9VWT5   A0A0P5ZG32   A0A0N8AT58   A0A0P6CS13   A0A2J7QUF0   S4PAI0   A0A0L8GRP0   A0A0L0C346   A0A210PJB4   A0A1Q3F6J9   A0A226DEA9   A0A131XA09   L7MAX6   A0A131YNL7   W5PWH7   L8IK98   E1BND1   K9IK67   A0A0B7A2H7   A0A093IKD8   T2MIB6   A0A2L2YH46   H3ALJ5   T1JEG9   A0A2H8TT70   A0A2S2N9Q6   A0A1E1XSB8  

Pubmed

22118469    28756777    26354079    20566863    26483478    25244985    + More
26369729    17994087    12364791    14747013    17210077    20920257    23761445    17510324    18362917    19820115    29403074    27289101    24438588    25401762    26823975    25315136    15632085    28004739    25348373    17550304    23537049    24495485    22992520    25474469    22936249    26334808    27129103    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    23622113    26108605    28812685    28049606    25576852    26830274    20809919    22751099    19393038    24065732    26561354    9215903    29209593   

EMBL

GDQN01002459    JAT88595.1    AGBW02009795    OWR49910.1    KZ150131    PZC73051.1    + More
NWSH01000720    PCG74628.1    ODYU01002408    SOQ39849.1    RSAL01000199    RVE44515.1    KQ459249    KPJ02266.1    DS235767    EEB16724.1    JXUM01079006    JXUM01079007    KQ563101    KXJ74463.1    GEBQ01014745    JAT25232.1    GECZ01006430    JAS63339.1    NEVH01009372    PNF33412.1    GECU01031510    JAS76196.1    GDAI01000799    JAI16804.1    CH963847    EDW72859.1    AAAB01008849    EAA45011.3    ADMH02000656    ETN65421.1    CH477190    EAT48700.1    KQ971319    KYB28824.1    GEDC01024946    JAS12352.1    GFDL01011728    JAV23317.1    DS232245    EDS38320.1    PYGN01002038    PSN31732.1    LJIJ01000061    ODN03864.1    CH902618    EDV40061.1    ATLV01022585    KE525334    KFB47825.1    KK854212    PTY13169.1    GBHO01018962    JAG24642.1    GDHC01016166    JAQ02463.1    NEVH01019962    PNF22195.1    CH933809    EDW18724.1    UFQS01000144    UFQT01000144    SSX00445.1    SSX20825.1    CH379069    EAL30826.2    GEZM01086077    JAV59792.1    GAKP01020754    JAC38198.1    PNF22193.1    CM000159    EDW95190.1    APGK01042948    KB741011    KB632341    ENN75526.1    ERL92997.1    GAMC01005222    JAC01334.1    JH818068    EKC22813.1    ACPB03000211    GAHY01000505    JAA77005.1    GBBI01001065    JAC17647.1    CH940647    EDW70479.1    CP012525    ALC44159.1    CH954178    EDV52495.1    OUUW01000009    SPP84740.1    GFWV01001623    MAA26353.1    CCAG010000158    GGLE01005991    MBY10117.1    GFTR01005695    JAW10731.1    GDHF01027313    JAI25001.1    CM000363    CM002912    EDX11220.1    KMZ00757.1    CH480826    EDW44200.1    GBGD01001798    JAC87091.1    GECL01001099    JAP05025.1    CH916366    EDV97374.1    GDKW01001803    JAI54792.1    JXJN01000693    GANO01002150    JAB57721.1    AY084184    AAL89922.1    AE014296    BT044141    AAF51578.1    ACH92206.1    GDIP01044568    JAM59147.1    GDIQ01245395    JAK06330.1    GDIP01004122    JAM99593.1    NEVH01011186    PNF32205.1    GAIX01006372    JAA86188.1    KQ420696    KOF79562.1    JRES01000955    KNC26768.1    NEDP02076559    OWF36588.1    GFDL01011851    JAV23194.1    LNIX01000020    OXA43925.1    GEFH01004107    JAP64474.1    GACK01004711    JAA60323.1    GEDV01009076    JAP79481.1    AMGL01023951    AMGL01023952    AMGL01023953    JH881101    ELR56553.1    GABZ01006488    JAA47037.1    HACG01028269    CEK75134.1    KL215899    KFV67221.1    HAAD01005619    CDG71851.1    IAAA01027464    IAAA01027465    LAA06690.1    AFYH01052170    AFYH01052171    AFYH01052172    JH432117    GFXV01005355    MBW17160.1    GGMR01001260    MBY13879.1    GFAA01001207    JAU02228.1   

Proteomes

UP000007151    UP000218220    UP000283053    UP000053268    UP000009046    UP000069940    + More
UP000249989    UP000076408    UP000075901    UP000235965    UP000007798    UP000007062    UP000000673    UP000069272    UP000008820    UP000007266    UP000002320    UP000245037    UP000094527    UP000007801    UP000030765    UP000075920    UP000009192    UP000095301    UP000192223    UP000192221    UP000001819    UP000002282    UP000019118    UP000030742    UP000095300    UP000005408    UP000015103    UP000008792    UP000092553    UP000008711    UP000268350    UP000092444    UP000000304    UP000001292    UP000085678    UP000091820    UP000092445    UP000001070    UP000092443    UP000092460    UP000000803    UP000078200    UP000053454    UP000037069    UP000242188    UP000198287    UP000002356    UP000009136    UP000053875    UP000008672   

PRIDE

Q8SXR2    Q9VPH4   

Pfam

PF10357   Kin17_mid        + More
PF18131   KN17_SH3
PF15684   AROS
PF11623   NdhS

Interpro

IPR014722   Rib_L2_dom2        + More
IPR041330   KN17_SH3       
IPR037321   KIN17-like       
IPR036236   Znf_C2H2_sf       
IPR041995   KOW_KIN17       
IPR038254   KIN17_WH-like_sf       
IPR019447   DNA/RNA-bd_Kin17_cons_domain       
IPR005824   KOW       
IPR023262   AROS       
IPR021659   NdhS       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF57667   SSF57667       

Gene 3D

1.10.10.2030     2.30.30.30    

CDD

cd13155  KOW_KIN17

ProteinModelPortal

A0A1E1WNN2   A0A212F856   A0A2W1BFL0   A0A2A4JSG1   A0A2H1VG81   A0A3S2LU78   + More
A0A194QFM1   E0VTJ7   A0A182GPQ7   A0A182YE29   A0A1B6LNC3   A0A182SFI0   A0A1B6GLL9   A0A2J7QXV1   A0A1B6HNE3   A0A0K8TR12   B4MLK3   Q7PGA1   W5JMU0   A0A182F462   Q17PQ1   A0A139WLR3   A0A1B6CFY9   A0A1Q3F6Z0   B0X0S8   A0A2P8XIC0   A0A1D2NF35   B3M977   A0A084WC81   A0A2R7W0Q7   A0A0A9XV33   A0A182W872   A0A146L1N4   A0A2J7Q0T7   B4KY22   A0A1I8N6I3   A0A1W4WSB3   A0A336LSL5   A0A1W4W6F0   Q2M0V0   A0A1Y1KE81   A0A034V9J6   A0A2J7Q0T3   B4PFA4   N6U4I1   W8BWQ4   A0A1I8NZB3   K1PM59   R4G5J3   A0A023F8J2   B4LGF0   A0A0M3QWH5   B3NIJ9   A0A3B0K9D8   A0A293LCC1   A0A1B0G835   A0A2R5LLB8   A0A224XRU7   A0A0K8UEI6   B4QRX4   B4IA87   A0A069DTK1   A0A1S3H5D1   A0A1A9X569   A0A1B0A177   A0A0V0GAD9   B4IWX3   A0A0N7Z916   A0A1A9XA23   A0A1B0AN23   U5EUW0   Q8SXR2   Q9VPH4   A0A1A9VWT5   A0A0P5ZG32   A0A0N8AT58   A0A0P6CS13   A0A2J7QUF0   S4PAI0   A0A0L8GRP0   A0A0L0C346   A0A210PJB4   A0A1Q3F6J9   A0A226DEA9   A0A131XA09   L7MAX6   A0A131YNL7   W5PWH7   L8IK98   E1BND1   K9IK67   A0A0B7A2H7   A0A093IKD8   T2MIB6   A0A2L2YH46   H3ALJ5   T1JEG9   A0A2H8TT70   A0A2S2N9Q6   A0A1E1XSB8  

PDB

2V1N     E-value=6.88436e-33,     Score=351

KEGG

101741065    K13102 DNA/RNA-binding protein KIN17 | (RefSeq) DNA/RNA-binding protein KIN17-like

GO

GO:0006260   GO:0005634   GO:0003690   GO:0006974   GO:0071011   GO:0000398   GO:0003676   GO:0003723   GO:0016363   GO:0032991  

PANTHER

PTHR12805  

Length:

386

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00017

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00738

outside

1  -  386

 

 

Pi

295.842253

Theta

159.622617

Tajima's D

2.297783

CLR

1.800049

CSRT

0.921053947302635

Interpretation

Uncertain